CircRNA Information

General Information
circRNA Basic Information
CircID chr8:142569080|142569278
Strand -
CircType exon
Host Gene
Algorism CIRI2;
Sequence CCCACCTGGGGCCGCTCCCGGCCCTCCAACTCCCCAGGGTCCAGTCAGTCCCTGGCGGCTGTGGGCTCACGACACCCTCATGCAGCTGCCCTGCCCTGGGTCAGCCCTCCACCCTGCACTCCTCACCTCCCCTAAGTGATTCAAAGTCCCCATCCATTCTCACCTGGTCGACCCAGGGGTCTTTCTAAACCCCAGCCCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:142569080|142569278 hsa-miR-34b-5p 0 0 1
chr8:142569080|142569278 hsa-miR-34b-3p 0 0 1
chr8:142569080|142569278 hsa-miR-504-5p 0 0 1
chr8:142569080|142569278 hsa-miR-504-3p 0 0 1
chr8:142569080|142569278 hsa-miR-571 0 0 1
chr8:142569080|142569278 hsa-miR-580-5p 0 0 1
chr8:142569080|142569278 hsa-miR-580-3p 0 0 1
chr8:142569080|142569278 hsa-miR-629-5p 0 0 1
chr8:142569080|142569278 hsa-miR-629-3p 0 0 1
chr8:142569080|142569278 hsa-miR-939-5p 0 0 1
chr8:142569080|142569278 hsa-miR-939-3p 0 0 1
chr8:142569080|142569278 hsa-miR-125a-3p 1 1 1
chr8:142569080|142569278 hsa-miR-1225-3p 0 0 1
chr8:142569080|142569278 hsa-miR-331-3p 0 1 1
chr8:142569080|142569278 hsa-miR-1207-5p 1 1 1
chr8:142569080|142569278 hsa-miR-1233 0 0 1
chr8:142569080|142569278 hsa-miR-886-5p 0 0 1
chr8:142569080|142569278 hsa-miR-768-5p 0 0 1
chr8:142569080|142569278 hsa-miR-608 1 0 0
chr8:142569080|142569278 hsa-miR-612 1 0 0
chr8:142569080|142569278 hsa-miR-663a 1 0 0
chr8:142569080|142569278 hsa-miR-762 1 1 0
chr8:142569080|142569278 hsa-miR-920 1 0 0
chr8:142569080|142569278 hsa-miR-940 1 0 0
chr8:142569080|142569278 hsa-miR-1268a 1 0 0
chr8:142569080|142569278 hsa-miR-1275 1 0 0
chr8:142569080|142569278 hsa-miR-1321 1 0 0
chr8:142569080|142569278 hsa-miR-3141 1 0 0
chr8:142569080|142569278 hsa-miR-3147 1 0 0
chr8:142569080|142569278 hsa-miR-3170 0 1 0
chr8:142569080|142569278 hsa-miR-1193 1 0 0
chr8:142569080|142569278 hsa-miR-3175 1 0 0
chr8:142569080|142569278 hsa-miR-4292 0 1 0
chr8:142569080|142569278 hsa-miR-3936 1 0 0
chr8:142569080|142569278 hsa-miR-1268b 1 0 0
chr8:142569080|142569278 hsa-miR-4450 1 0 0
chr8:142569080|142569278 hsa-miR-3689c 1 0 0
chr8:142569080|142569278 hsa-miR-4488 1 0 0
chr8:142569080|142569278 hsa-miR-4492 1 1 0
chr8:142569080|142569278 hsa-miR-4498 1 1 0
chr8:142569080|142569278 hsa-miR-2392 1 0 0
chr8:142569080|142569278 hsa-miR-4507 1 0 0
chr8:142569080|142569278 hsa-miR-4513 1 0 0
chr8:142569080|142569278 hsa-miR-4515 1 0 0
chr8:142569080|142569278 hsa-miR-4525 1 0 0
chr8:142569080|142569278 hsa-miR-1587 0 1 0
chr8:142569080|142569278 hsa-miR-4651 1 0 0
chr8:142569080|142569278 hsa-miR-4656 1 1 0
chr8:142569080|142569278 hsa-miR-4658 1 0 0
chr8:142569080|142569278 hsa-miR-4689 1 1 0
chr8:142569080|142569278 hsa-miR-4706 1 0 0
chr8:142569080|142569278 hsa-miR-4710 1 1 0
chr8:142569080|142569278 hsa-miR-4721 1 1 0
chr8:142569080|142569278 hsa-miR-4739 1 1 0
chr8:142569080|142569278 hsa-miR-4741 1 0 0
chr8:142569080|142569278 hsa-miR-4784 1 0 0
chr8:142569080|142569278 hsa-miR-5090 1 0 0
chr8:142569080|142569278 hsa-miR-5192 1 0 0
chr8:142569080|142569278 hsa-miR-5698 1 0 0
chr8:142569080|142569278 hsa-miR-5787 1 1 0
chr8:142569080|142569278 hsa-miR-6069 1 0 0
chr8:142569080|142569278 hsa-miR-6086 1 0 0
chr8:142569080|142569278 hsa-miR-6133 1 0 0
chr8:142569080|142569278 hsa-miR-6134 1 0 0
chr8:142569080|142569278 hsa-miR-6860 1 0 0
chr8:142569080|142569278 hsa-miR-8052 1 0 0
chr8:142569080|142569278 hsa-miR-8085 1 0 0
chr8:142569080|142569278 hsa-miR-8089 1 1 0
chr8:142569080|142569278 hsa-miR-12114 1 0 0
chr8:142569080|142569278 hsa-miR-4433b-3p 1 1 0
chr8:142569080|142569278 hsa-miR-92a-2-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6734-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6747-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4433a-3p 1 0 0
chr8:142569080|142569278 hsa-miR-6861-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7106-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6825-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6894-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6857-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6799-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6804-5p 0 1 0
chr8:142569080|142569278 hsa-miR-6515-5p 0 1 0
chr8:142569080|142569278 hsa-miR-6089 1 0 0
chr8:142569080|142569278 hsa-miR-6757-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6880-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1301-3p 1 1 0
chr8:142569080|142569278 hsa-miR-6890-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6741-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6727-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6721-5p 1 1 0
chr8:142569080|142569278 hsa-miR-197-5p 1 0 0
chr8:142569080|142569278 hsa-miR-8069 1 0 0
chr8:142569080|142569278 hsa-miR-7845-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6783-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6742-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6716-5p 1 0 0
chr8:142569080|142569278 hsa-miR-659-3p 1 0 0
chr8:142569080|142569278 hsa-miR-3180-3p 1 0 0
chr8:142569080|142569278 hsa-miR-6796-5p 1 1 0
chr8:142569080|142569278 hsa-miR-185-3p 1 1 0
chr8:142569080|142569278 hsa-miR-6732-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6805-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1224-5p 1 0 0
chr8:142569080|142569278 hsa-miR-486-3p 1 0 0
chr8:142569080|142569278 hsa-miR-6881-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6782-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6821-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6810-5p 1 1 0
chr8:142569080|142569278 hsa-miR-7855-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6786-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6852-5p 0 1 0
chr8:142569080|142569278 hsa-miR-7109-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1226-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1229-5p 1 0 0
chr8:142569080|142569278 hsa-miR-193b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6784-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4640-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6753-5p 1 1 0
chr8:142569080|142569278 hsa-miR-1228-5p 1 0 0
chr8:142569080|142569278 hsa-miR-877-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7854-3p 1 0 0
chr8:142569080|142569278 hsa-miR-4787-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4446-3p 1 1 0
chr8:142569080|142569278 hsa-miR-149-3p 1 1 0
chr8:142569080|142569278 hsa-miR-937-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6824-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6789-5p 1 0 0
chr8:142569080|142569278 hsa-miR-3162-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6800-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6742-3p 0 1 0
chr8:142569080|142569278 hsa-miR-4776-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7112-5p 1 1 0
chr8:142569080|142569278 hsa-miR-3191-3p 1 0 0
chr8:142569080|142569278 hsa-miR-744-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6746-3p 0 1 0
chr8:142569080|142569278 hsa-miR-3670 0 1 0
chr8:142569080|142569278 hsa-miR-412-5p 1 1 0
chr8:142569080|142569278 hsa-miR-1233-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1273h-5p 1 0 0
chr8:142569080|142569278 hsa-miR-3689b-3p 1 0 0
chr8:142569080|142569278 hsa-miR-4763-3p 1 1 0
chr8:142569080|142569278 hsa-miR-6769b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6778-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6787-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6812-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6816-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6865-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6870-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6775-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1343-5p 1 1 0
chr8:142569080|142569278 hsa-miR-5001-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6726-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6743-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6752-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6756-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6769a-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6803-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6842-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6851-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7107-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7110-5p 1 1 0
chr8:142569080|142569278 hsa-miR-1249-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6722-3p 1 0 0
chr8:142569080|142569278 hsa-miR-6751-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6763-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6779-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6797-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6808-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6879-5p 1 1 0
chr8:142569080|142569278 hsa-miR-7111-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1915-3p 1 1 0
chr8:142569080|142569278 hsa-miR-3620-5p 0 1 0
chr8:142569080|142569278 hsa-miR-4728-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6780b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6836-5p 1 0 0
chr8:142569080|142569278 hsa-miR-10396a-5p 1 0 0
chr8:142569080|142569278 hsa-miR-10396b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1237-5p 1 0 0
chr8:142569080|142569278 hsa-miR-1909-3p 1 0 0
chr8:142569080|142569278 hsa-miR-328-5p 1 1 0
chr8:142569080|142569278 hsa-miR-3689a-3p 1 0 0
chr8:142569080|142569278 hsa-miR-4632-5p 1 1 0
chr8:142569080|142569278 hsa-miR-4649-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4685-5p 1 1 0
chr8:142569080|142569278 hsa-miR-4725-3p 1 0 0
chr8:142569080|142569278 hsa-miR-4749-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6729-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6735-5p 0 1 0
chr8:142569080|142569278 hsa-miR-675-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6777-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6794-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6795-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6846-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6848-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6858-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6883-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6887-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6889-5p 1 1 0
chr8:142569080|142569278 hsa-miR-3187-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4723-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6885-5p 1 0 0
chr8:142569080|142569278 hsa-miR-365a-5p 1 0 0
chr8:142569080|142569278 hsa-miR-365b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6511b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6731-5p 1 0 0
chr8:142569080|142569278 hsa-miR-7843-5p 0 1 0
chr8:142569080|142569278 hsa-miR-1914-3p 1 0 0
chr8:142569080|142569278 hsa-miR-4665-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6736-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6855-5p 1 1 0
chr8:142569080|142569278 hsa-miR-324-3p 1 0 0
chr8:142569080|142569278 hsa-miR-6785-5p 1 0 0
chr8:142569080|142569278 hsa-miR-4667-5p 0 1 0
chr8:142569080|142569278 hsa-miR-6790-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6849-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6724-5p 1 1 0
chr8:142569080|142569278 hsa-miR-6791-5p 1 1 0
chr8:142569080|142569278 hsa-miR-5009-5p 1 0 0
chr8:142569080|142569278 hsa-miR-323b-5p 1 0 0
chr8:142569080|142569278 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr8:142569080|142569278
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MAAVGSRHPHAAALPWVSPPPCTPHLP
Nucleotide Sequence CTGGCGGCTGTGGGCTCACGACACCCTCATGCAGCTGCCCTGCCCTGGGTCAGCCCTCCACCCTGCACTCCTCACCTCCCCTAA
CircID chr8:142569080|142569278
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MWAHDTLMQLPCPGSALHPALLTSPK
Nucleotide Sequence CTGTGGGCTCACGACACCCTCATGCAGCTGCCCTGCCCTGGGTCAGCCCTCCACCCTGCACTCCTCACCTCCCCTAAGTGA
CircID chr8:142569080|142569278
ORF Type ORF3
Protein Length 60
Nucleotide Length 183
Protein Sequence MGPLPALQLPRVQSVPGGCGLTTPSCSCPALGQPSTLHSSPPLSDSKSPSILTWSTQGSF
Nucleotide Sequence CTGGGGCCGCTCCCGGCCCTCCAACTCCCCAGGGTCCAGTCAGTCCCTGGCGGCTGTGGGCTCACGACACCCTCATGCAGCTGCCCTGCCCTGGGTCAGCCCTCCACCCTGCACTCCTCACCTCCCCTAAGTGATTCAAAGTCCCCATCCATTCTCACCTGGTCGACCCAGGGGTCTTTCTAA
CircID chr8:142569080|142569278
ORF Type ORF4
Protein Length 28
Nucleotide Length 84
Protein Sequence MHEGVVSPQPPGTDWTLGSWRAGSGPRW
Nucleotide Sequence CTGCATGAGGGTGTCGTGAGCCCACAGCCGCCAGGGACTGACTGGACCCTGGGGAGTTGGAGGGCCGGGAGCGGCCCCAGGTGG
CircID chr8:142569080|142569278
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MGTLNHLGEVRSAGWRADPGQGSCMRVS
Nucleotide Sequence ATGGGGACTTTGAATCACTTAGGGGAGGTGAGGAGTGCAGGGTGGAGGGCTGACCCAGGGCAGGGCAGCTGCATGAGGGTGTCGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab