CircRNA Information

General Information
circRNA Basic Information
CircID chr8:142736335|142736602
Strand -
CircType exon
Host Gene ENSG00000130193.7;
Algorism CIRI2;
Sequence CCCCTTAGAGCTGCCCCTCTCTGGCCTGGCCGGCAGGCGTCTTCTTAACTCCTCTGTCCTCTATATTCAGCATGTTCCTTGTCAGCTGCTGGGCCGGCCCTGCCTTGCGCTAGCAGAGCCTCTCCTGGCAGCTTCTCAGGTCTCCCTAATGGAGACACCAGGCTACTAGGACACTGGCTGGGGCCACCCCCTCCTGCCTAATGCCTCACCTTACAGCTGGGGAAACTGAGGCCTGGAATGGCCCAGAGTCACCAAGGCAAAGTTGGGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:142736335|142736602 hsa-miR-18a-5p 0 0 1
chr8:142736335|142736602 hsa-miR-18a-3p 0 0 1
chr8:142736335|142736602 hsa-miR-22-5p 0 0 1
chr8:142736335|142736602 hsa-miR-22-3p 0 0 1
chr8:142736335|142736602 hsa-miR-136-5p 0 0 1
chr8:142736335|142736602 hsa-miR-136-3p 0 0 1
chr8:142736335|142736602 hsa-miR-326 0 0 1
chr8:142736335|142736602 hsa-miR-325 0 0 1
chr8:142736335|142736602 hsa-miR-18b-5p 0 0 1
chr8:142736335|142736602 hsa-miR-18b-3p 0 0 1
chr8:142736335|142736602 hsa-miR-575 0 0 1
chr8:142736335|142736602 hsa-miR-596 0 0 1
chr8:142736335|142736602 hsa-miR-608 0 0 1
chr8:142736335|142736602 hsa-miR-612 0 0 1
chr8:142736335|142736602 hsa-miR-621 0 0 1
chr8:142736335|142736602 hsa-miR-646 0 0 1
chr8:142736335|142736602 hsa-miR-877-5p 0 0 1
chr8:142736335|142736602 hsa-miR-877-3p 0 0 1
chr8:142736335|142736602 hsa-miR-665 0 0 1
chr8:142736335|142736602 hsa-miR-760 0 0 1
chr8:142736335|142736602 hsa-miR-940 0 0 1
chr8:142736335|142736602 hsa-miR-663b 0 0 1
chr8:142736335|142736602 hsa-miR-1253 0 0 1
chr8:142736335|142736602 hsa-miR-1321 0 0 1
chr8:142736335|142736602 hsa-miR-1827 0 0 1
chr8:142736335|142736602 hsa-miR-769-5p 0 0 1
chr8:142736335|142736602 hsa-miR-486-3p 0 0 1
chr8:142736335|142736602 hsa-miR-199a-5p 0 0 1
chr8:142736335|142736602 hsa-miR-423-5p 0 0 1
chr8:142736335|142736602 hsa-miR-199b-5p 0 0 1
chr8:142736335|142736602 hsa-miR-885-5p 0 0 1
chr8:142736335|142736602 hsa-miR-1207-5p 1 0 1
chr8:142736335|142736602 hsa-miR-330-5p 0 0 1
chr8:142736335|142736602 hsa-miR-1300 0 0 1
chr8:142736335|142736602 hsa-miR-1285 0 0 1
chr8:142736335|142736602 hsa-miR-661 1 0 0
chr8:142736335|142736602 hsa-miR-1202 1 0 0
chr8:142736335|142736602 hsa-miR-1204 1 0 0
chr8:142736335|142736602 hsa-miR-3132 1 0 0
chr8:142736335|142736602 hsa-miR-3138 1 0 0
chr8:142736335|142736602 hsa-miR-3188 1 0 0
chr8:142736335|142736602 hsa-miR-4298 1 0 0
chr8:142736335|142736602 hsa-miR-4533 1 0 0
chr8:142736335|142736602 hsa-miR-4656 1 0 0
chr8:142736335|142736602 hsa-miR-4739 1 0 0
chr8:142736335|142736602 hsa-miR-4751 1 0 0
chr8:142736335|142736602 hsa-miR-6081 1 0 0
chr8:142736335|142736602 hsa-miR-8085 1 0 0
chr8:142736335|142736602 hsa-miR-6765-5p 1 0 0
chr8:142736335|142736602 hsa-miR-1972 1 0 0
chr8:142736335|142736602 hsa-miR-6089 1 0 0
chr8:142736335|142736602 hsa-miR-197-5p 1 0 0
chr8:142736335|142736602 hsa-miR-7845-5p 1 0 0
chr8:142736335|142736602 hsa-miR-2467-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6810-5p 1 0 0
chr8:142736335|142736602 hsa-miR-5006-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6786-5p 1 0 0
chr8:142736335|142736602 hsa-miR-1226-5p 1 0 0
chr8:142736335|142736602 hsa-miR-4640-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6749-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6847-5p 1 0 0
chr8:142736335|142736602 hsa-miR-4743-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6824-5p 1 0 0
chr8:142736335|142736602 hsa-miR-4707-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6801-5p 1 0 0
chr8:142736335|142736602 hsa-miR-4763-3p 1 0 0
chr8:142736335|142736602 hsa-miR-6775-5p 1 0 0
chr8:142736335|142736602 hsa-miR-5001-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6754-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6842-5p 1 0 0
chr8:142736335|142736602 hsa-miR-1249-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6722-3p 1 0 0
chr8:142736335|142736602 hsa-miR-6774-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6779-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6879-5p 1 0 0
chr8:142736335|142736602 hsa-miR-328-5p 1 0 0
chr8:142736335|142736602 hsa-miR-4726-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6735-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6831-5p 1 0 0
chr8:142736335|142736602 hsa-miR-939-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6856-5p 1 0 0
chr8:142736335|142736602 hsa-miR-10398-3p 1 0 0
chr8:142736335|142736602 hsa-miR-3173-3p 1 0 0
chr8:142736335|142736602 hsa-miR-3679-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6891-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6750-5p 1 0 0
chr8:142736335|142736602 hsa-miR-6849-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:142736335|142736602
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MSAAGPALPCASRASPGSFSGLPNGDTRLLGHWLGPPPPA
Nucleotide Sequence TTGTCAGCTGCTGGGCCGGCCCTGCCTTGCGCTAGCAGAGCCTCTCCTGGCAGCTTCTCAGGTCTCCCTAATGGAGACACCAGGCTACTAGGACACTGGCTGGGGCCACCCCCTCCTGCCTAA
CircID chr8:142736335|142736602
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MPLSGLAGRRLLNSSVLYIQHVPCQLLGRPCLALAEPLLAASQVSLMETPGY
Nucleotide Sequence CTGCCCCTCTCTGGCCTGGCCGGCAGGCGTCTTCTTAACTCCTCTGTCCTCTATATTCAGCATGTTCCTTGTCAGCTGCTGGGCCGGCCCTGCCTTGCGCTAGCAGAGCCTCTCCTGGCAGCTTCTCAGGTCTCCCTAATGGAGACACCAGGCTACTAG
CircID chr8:142736335|142736602
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MAWPAGVFLTPLSSIFSMFLVSCWAGPALR
Nucleotide Sequence CTGGCCTGGCCGGCAGGCGTCTTCTTAACTCCTCTGTCCTCTATATTCAGCATGTTCCTTGTCAGCTGCTGGGCCGGCCCTGCCTTGCGCTAG
CircID chr8:142736335|142736602
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MAGATPSCLMPHLTAGETEAWNGPESPRQSW
Nucleotide Sequence CTGGCTGGGGCCACCCCCTCCTGCCTAATGCCTCACCTTACAGCTGGGGAAACTGAGGCCTGGAATGGCCCAGAGTCACCAAGGCAAAGTTGG
CircID chr8:142736335|142736602
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MTRNMLNIEDRGVKKTPAGQAREGQL
Nucleotide Sequence CTGACAAGGAACATGCTGAATATAGAGGACAGAGGAGTTAAGAAGACGCCTGCCGGCCAGGCCAGAGAGGGGCAGCTCTAA
CircID chr8:142736335|142736602
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MVSPLGRPEKLPGEALLAQGRAGPAADKEHAEYRGQRS
Nucleotide Sequence CTGGTGTCTCCATTAGGGAGACCTGAGAAGCTGCCAGGAGAGGCTCTGCTAGCGCAAGGCAGGGCCGGCCCAGCAGCTGACAAGGAACATGCTGAATATAGAGGACAGAGGAGTTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab