CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143022026|143022200
Strand +
CircType exon
Host Gene ENSG00000160932.9;
Algorism CIRI2;
Sequence CTCCCTCCCCAAACATGGCCCCCAGAAGCCGCCACGTGCTCTCACGTGCACTGCACACCCACGTACACAGCCAGGCACACATCCCTACTGACACGGTCTCCCTGGGGACCCTGTCAGCATGTCCATGGGACTTGGTCCTGATGTTGGACCGTAAGACTCCAGGGAACCCTCGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143022026|143022200 hsa-miR-148a-5p 0 0 1
chr8:143022026|143022200 hsa-miR-148a-3p 0 0 1
chr8:143022026|143022200 hsa-miR-223-5p 0 0 1
chr8:143022026|143022200 hsa-miR-223-3p 0 0 1
chr8:143022026|143022200 hsa-miR-152-5p 0 0 1
chr8:143022026|143022200 hsa-miR-152-3p 0 0 1
chr8:143022026|143022200 hsa-miR-148b-5p 0 0 1
chr8:143022026|143022200 hsa-miR-148b-3p 0 0 1
chr8:143022026|143022200 hsa-miR-609 0 0 1
chr8:143022026|143022200 hsa-miR-637 1 1 1
chr8:143022026|143022200 hsa-miR-661 0 0 1
chr8:143022026|143022200 hsa-miR-924 0 0 1
chr8:143022026|143022200 hsa-miR-936 0 0 1
chr8:143022026|143022200 hsa-miR-939-5p 0 0 1
chr8:143022026|143022200 hsa-miR-939-3p 0 0 1
chr8:143022026|143022200 hsa-miR-1289 0 0 1
chr8:143022026|143022200 hsa-miR-628-5p 0 1 1
chr8:143022026|143022200 hsa-miR-199b-3p 0 0 1
chr8:143022026|143022200 hsa-miR-199a-3p 0 0 1
chr8:143022026|143022200 hsa-miR-1274a 0 0 1
chr8:143022026|143022200 hsa-miR-550 0 0 1
chr8:143022026|143022200 hsa-miR-1254 0 0 1
chr8:143022026|143022200 hsa-miR-595 1 0 0
chr8:143022026|143022200 hsa-miR-297 1 0 0
chr8:143022026|143022200 hsa-miR-1268a 1 0 0
chr8:143022026|143022200 hsa-miR-2861 1 0 0
chr8:143022026|143022200 hsa-miR-3196 1 0 0
chr8:143022026|143022200 hsa-miR-4309 0 1 0
chr8:143022026|143022200 hsa-miR-4308 0 1 0
chr8:143022026|143022200 hsa-miR-4254 0 1 0
chr8:143022026|143022200 hsa-miR-1268b 1 0 0
chr8:143022026|143022200 hsa-miR-4447 1 0 0
chr8:143022026|143022200 hsa-miR-4525 1 0 0
chr8:143022026|143022200 hsa-miR-3960 1 0 0
chr8:143022026|143022200 hsa-miR-4710 1 0 0
chr8:143022026|143022200 hsa-miR-4734 1 0 0
chr8:143022026|143022200 hsa-miR-8089 1 0 0
chr8:143022026|143022200 hsa-miR-11400 1 0 0
chr8:143022026|143022200 hsa-miR-12119 1 0 0
chr8:143022026|143022200 hsa-miR-135a-3p 1 0 0
chr8:143022026|143022200 hsa-miR-143-5p 0 1 0
chr8:143022026|143022200 hsa-miR-128-1-5p 1 0 0
chr8:143022026|143022200 hsa-miR-4731-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6765-5p 1 0 0
chr8:143022026|143022200 hsa-miR-4687-3p 1 0 0
chr8:143022026|143022200 hsa-miR-6799-5p 1 0 0
chr8:143022026|143022200 hsa-miR-1227-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6089 1 0 0
chr8:143022026|143022200 hsa-miR-6757-5p 1 1 0
chr8:143022026|143022200 hsa-miR-3064-5p 1 1 0
chr8:143022026|143022200 hsa-miR-6741-5p 1 0 0
chr8:143022026|143022200 hsa-miR-23b-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6776-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6748-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6793-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6827-5p 1 0 0
chr8:143022026|143022200 hsa-miR-23a-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6760-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6782-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6821-5p 1 0 0
chr8:143022026|143022200 hsa-miR-1226-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6740-5p 0 1 0
chr8:143022026|143022200 hsa-miR-4787-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6789-5p 1 0 0
chr8:143022026|143022200 hsa-miR-574-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6869-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6818-5p 1 0 0
chr8:143022026|143022200 hsa-miR-7113-5p 0 1 0
chr8:143022026|143022200 hsa-miR-3913-3p 0 1 0
chr8:143022026|143022200 hsa-miR-10400-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6752-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6754-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6803-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6751-5p 1 0 0
chr8:143022026|143022200 hsa-miR-1915-3p 0 1 0
chr8:143022026|143022200 hsa-miR-6862-5p 0 1 0
chr8:143022026|143022200 hsa-miR-1237-5p 1 0 0
chr8:143022026|143022200 hsa-miR-328-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6846-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6848-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6845-5p 1 0 0
chr8:143022026|143022200 hsa-miR-3085-5p 1 0 0
chr8:143022026|143022200 hsa-miR-3198 0 1 0
chr8:143022026|143022200 hsa-miR-1271-3p 1 1 0
chr8:143022026|143022200 hsa-miR-4667-5p 1 0 0
chr8:143022026|143022200 hsa-miR-6762-5p 1 1 0
chr8:143022026|143022200 hsa-miR-6764-5p 0 1 0
chr8:143022026|143022200 hsa-miR-6504-5p 1 1 0
chr8:143022026|143022200 hsa-miR-550a-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143022026|143022200
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MAPRSRHVLSRALHTHVHSQAHIPTDTVSLGTLSACPWDLVLMLDRKTPGNPR
Nucleotide Sequence ATGGCCCCCAGAAGCCGCCACGTGCTCTCACGTGCACTGCACACCCACGTACACAGCCAGGCACACATCCCTACTGACACGGTCTCCCTGGGGACCCTGTCAGCATGTCCATGGGACTTGGTCCTGATGTTGGACCGTAAGACTCCAGGGAACCCTCGT
CircID chr8:143022026|143022200
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MCAWLCTWVCSARESTWRLLGAMFGEG
Nucleotide Sequence ATGTGTGCCTGGCTGTGTACGTGGGTGTGCAGTGCACGTGAGAGCACGTGGCGGCTTCTGGGGGCCATGTTTGGGGAGGGA
CircID chr8:143022026|143022200
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MESYGPTSGPSPMDMLTGSPGRPCQ
Nucleotide Sequence CTGGAGTCTTACGGTCCAACATCAGGACCAAGTCCCATGGACATGCTGACAGGGTCCCCAGGGAGACCGTGTCAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab