CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143274500|143274676
Strand +
CircType exon
Host Gene ENSG00000250571.5;
Algorism CIRI2;
Sequence CTCCACCCTCTGGACCACTGCCTCCGCTCCTCTCTGACCGCCACGTGCTCCCGGGCTGTGGCCCTGACACAGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTGGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCTTCCCAGCTCGGTTCAAGAGCCTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143274500|143274676 hsa-miR-198 0 1 1
chr8:143274500|143274676 hsa-miR-34a-5p 0 0 1
chr8:143274500|143274676 hsa-miR-34a-3p 0 0 1
chr8:143274500|143274676 hsa-miR-370-5p 0 0 1
chr8:143274500|143274676 hsa-miR-370-3p 0 0 1
chr8:143274500|143274676 hsa-miR-449a 0 0 1
chr8:143274500|143274676 hsa-miR-503-5p 0 0 1
chr8:143274500|143274676 hsa-miR-503-3p 0 0 1
chr8:143274500|143274676 hsa-miR-592 0 0 1
chr8:143274500|143274676 hsa-miR-597-5p 0 0 1
chr8:143274500|143274676 hsa-miR-597-3p 0 0 1
chr8:143274500|143274676 hsa-miR-650 1 1 1
chr8:143274500|143274676 hsa-miR-449b-5p 0 0 1
chr8:143274500|143274676 hsa-miR-449b-3p 0 0 1
chr8:143274500|143274676 hsa-miR-658 1 1 1
chr8:143274500|143274676 hsa-miR-665 0 0 1
chr8:143274500|143274676 hsa-miR-1204 0 0 1
chr8:143274500|143274676 hsa-miR-1252-5p 0 0 1
chr8:143274500|143274676 hsa-miR-1252-3p 0 0 1
chr8:143274500|143274676 hsa-miR-1827 0 0 1
chr8:143274500|143274676 hsa-miR-525-5p 0 1 1
chr8:143274500|143274676 hsa-miR-520a-5p 0 1 1
chr8:143274500|143274676 hsa-miR-769-3p 1 0 1
chr8:143274500|143274676 hsa-miR-34c-5p 0 0 1
chr8:143274500|143274676 hsa-miR-450b-3p 0 0 1
chr8:143274500|143274676 hsa-miR-612 1 0 0
chr8:143274500|143274676 hsa-miR-638 1 0 0
chr8:143274500|143274676 hsa-miR-663a 1 0 0
chr8:143274500|143274676 hsa-miR-762 1 0 0
chr8:143274500|143274676 hsa-miR-760 1 0 0
chr8:143274500|143274676 hsa-miR-920 1 0 0
chr8:143274500|143274676 hsa-miR-1182 1 0 0
chr8:143274500|143274676 hsa-miR-1293 1 0 0
chr8:143274500|143274676 hsa-miR-1268a 1 0 0
chr8:143274500|143274676 hsa-miR-2861 1 1 0
chr8:143274500|143274676 hsa-miR-3132 1 0 0
chr8:143274500|143274676 hsa-miR-3138 1 0 0
chr8:143274500|143274676 hsa-miR-3147 1 0 0
chr8:143274500|143274676 hsa-miR-3175 1 0 0
chr8:143274500|143274676 hsa-miR-3188 1 0 0
chr8:143274500|143274676 hsa-miR-320e 1 0 0
chr8:143274500|143274676 hsa-miR-3196 1 0 0
chr8:143274500|143274676 hsa-miR-4259 1 0 0
chr8:143274500|143274676 hsa-miR-4270 1 0 0
chr8:143274500|143274676 hsa-miR-4271 1 0 0
chr8:143274500|143274676 hsa-miR-3612 1 0 0
chr8:143274500|143274676 hsa-miR-3621 1 0 0
chr8:143274500|143274676 hsa-miR-3916 1 0 0
chr8:143274500|143274676 hsa-miR-3918 1 1 0
chr8:143274500|143274676 hsa-miR-1268b 1 0 0
chr8:143274500|143274676 hsa-miR-4425 1 1 0
chr8:143274500|143274676 hsa-miR-4441 1 0 0
chr8:143274500|143274676 hsa-miR-4443 1 0 0
chr8:143274500|143274676 hsa-miR-4449 1 0 0
chr8:143274500|143274676 hsa-miR-4467 1 0 0
chr8:143274500|143274676 hsa-miR-4476 1 1 0
chr8:143274500|143274676 hsa-miR-3689c 1 0 0
chr8:143274500|143274676 hsa-miR-4487 1 1 0
chr8:143274500|143274676 hsa-miR-4498 1 0 0
chr8:143274500|143274676 hsa-miR-4505 1 0 0
chr8:143274500|143274676 hsa-miR-4507 1 0 0
chr8:143274500|143274676 hsa-miR-4523 1 0 0
chr8:143274500|143274676 hsa-miR-4533 1 1 0
chr8:143274500|143274676 hsa-miR-4537 1 0 0
chr8:143274500|143274676 hsa-miR-4539 1 0 0
chr8:143274500|143274676 hsa-miR-3960 1 0 0
chr8:143274500|143274676 hsa-miR-4648 1 0 0
chr8:143274500|143274676 hsa-miR-4651 1 0 0
chr8:143274500|143274676 hsa-miR-4656 1 0 0
chr8:143274500|143274676 hsa-miR-4686 1 0 0
chr8:143274500|143274676 hsa-miR-4688 1 0 0
chr8:143274500|143274676 hsa-miR-4734 1 0 0
chr8:143274500|143274676 hsa-miR-4739 1 1 0
chr8:143274500|143274676 hsa-miR-4779 1 0 0
chr8:143274500|143274676 hsa-miR-5090 1 0 0
chr8:143274500|143274676 hsa-miR-5739 1 0 0
chr8:143274500|143274676 hsa-miR-5787 1 0 0
chr8:143274500|143274676 hsa-miR-6081 1 0 0
chr8:143274500|143274676 hsa-miR-6086 1 0 0
chr8:143274500|143274676 hsa-miR-6090 1 1 0
chr8:143274500|143274676 hsa-miR-6127 1 0 0
chr8:143274500|143274676 hsa-miR-6131 1 0 0
chr8:143274500|143274676 hsa-miR-6133 1 0 0
chr8:143274500|143274676 hsa-miR-6860 1 0 0
chr8:143274500|143274676 hsa-miR-8072 1 0 0
chr8:143274500|143274676 hsa-miR-8089 1 0 0
chr8:143274500|143274676 hsa-miR-12115 1 0 0
chr8:143274500|143274676 hsa-miR-12118 1 0 0
chr8:143274500|143274676 hsa-miR-12119 1 0 0
chr8:143274500|143274676 hsa-miR-12120 1 0 0
chr8:143274500|143274676 hsa-miR-12128 1 1 0
chr8:143274500|143274676 hsa-miR-4433b-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6734-5p 1 0 0
chr8:143274500|143274676 hsa-miR-504-3p 1 0 0
chr8:143274500|143274676 hsa-miR-1247-3p 1 1 0
chr8:143274500|143274676 hsa-miR-323a-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4433a-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6765-5p 1 0 0
chr8:143274500|143274676 hsa-miR-671-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6861-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7106-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6825-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6894-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6857-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4687-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6799-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6728-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7851-3p 1 0 0
chr8:143274500|143274676 hsa-miR-1227-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3192-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6873-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7847-3p 1 0 0
chr8:143274500|143274676 hsa-miR-4695-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6746-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4722-5p 0 1 0
chr8:143274500|143274676 hsa-miR-6727-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6721-5p 1 0 0
chr8:143274500|143274676 hsa-miR-197-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6776-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7108-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6716-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3180-3p 1 0 0
chr8:143274500|143274676 hsa-miR-3190-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6805-5p 1 0 0
chr8:143274500|143274676 hsa-miR-2467-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6827-5p 1 0 0
chr8:143274500|143274676 hsa-miR-2467-3p 1 0 0
chr8:143274500|143274676 hsa-miR-7855-5p 1 0 0
chr8:143274500|143274676 hsa-miR-30b-3p 0 1 0
chr8:143274500|143274676 hsa-miR-5008-5p 1 0 0
chr8:143274500|143274676 hsa-miR-1226-5p 1 0 0
chr8:143274500|143274676 hsa-miR-185-5p 1 0 0
chr8:143274500|143274676 hsa-miR-204-3p 1 1 0
chr8:143274500|143274676 hsa-miR-1229-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4640-5p 1 1 0
chr8:143274500|143274676 hsa-miR-885-3p 1 0 0
chr8:143274500|143274676 hsa-miR-3127-5p 0 1 0
chr8:143274500|143274676 hsa-miR-1228-5p 1 0 0
chr8:143274500|143274676 hsa-miR-296-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6771-5p 1 0 0
chr8:143274500|143274676 hsa-let-7b-5p 1 0 0
chr8:143274500|143274676 hsa-miR-877-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6749-5p 1 1 0
chr8:143274500|143274676 hsa-miR-3160-3p 1 0 0
chr8:143274500|143274676 hsa-miR-149-3p 1 1 0
chr8:143274500|143274676 hsa-miR-6830-5p 1 0 0
chr8:143274500|143274676 hsa-miR-202-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6824-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6789-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6781-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6878-5p 1 0 0
chr8:143274500|143274676 hsa-miR-194-3p 1 1 0
chr8:143274500|143274676 hsa-miR-4800-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6895-5p 0 1 0
chr8:143274500|143274676 hsa-miR-423-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7846-3p 1 0 0
chr8:143274500|143274676 hsa-let-7c-5p 1 0 0
chr8:143274500|143274676 hsa-miR-208a-5p 1 0 0
chr8:143274500|143274676 hsa-miR-744-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6832-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6513-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6801-5p 1 1 0
chr8:143274500|143274676 hsa-miR-10400-5p 1 0 0
chr8:143274500|143274676 hsa-miR-1207-5p 1 0 0
chr8:143274500|143274676 hsa-miR-1233-5p 1 0 0
chr8:143274500|143274676 hsa-miR-1273h-5p 1 1 0
chr8:143274500|143274676 hsa-miR-3689b-3p 1 0 0
chr8:143274500|143274676 hsa-miR-4763-3p 1 0 0
chr8:143274500|143274676 hsa-miR-6778-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6816-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6893-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6775-5p 1 0 0
chr8:143274500|143274676 hsa-miR-1343-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3180 1 0 0
chr8:143274500|143274676 hsa-miR-5001-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6726-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6737-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6743-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6752-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6754-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6756-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6769a-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6803-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6813-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6815-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6819-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6851-5p 1 1 0
chr8:143274500|143274676 hsa-miR-7107-5p 1 0 0
chr8:143274500|143274676 hsa-miR-11181-3p 1 0 0
chr8:143274500|143274676 hsa-miR-1249-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6751-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6763-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6779-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6780a-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6797-5p 1 0 0
chr8:143274500|143274676 hsa-miR-7111-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4728-5p 1 0 0
chr8:143274500|143274676 hsa-miR-5196-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6780b-5p 1 0 0
chr8:143274500|143274676 hsa-miR-10396a-5p 1 0 0
chr8:143274500|143274676 hsa-miR-10396b-5p 1 0 0
chr8:143274500|143274676 hsa-miR-328-5p 1 1 0
chr8:143274500|143274676 hsa-miR-3689a-3p 1 0 0
chr8:143274500|143274676 hsa-miR-449c-5p 1 1 0
chr8:143274500|143274676 hsa-miR-4632-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4649-5p 1 0 0
chr8:143274500|143274676 hsa-miR-4725-3p 1 0 0
chr8:143274500|143274676 hsa-miR-4726-5p 1 1 0
chr8:143274500|143274676 hsa-miR-4749-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6729-5p 1 0 0
chr8:143274500|143274676 hsa-miR-675-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6795-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6846-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6848-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6858-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6883-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6887-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3187-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6831-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6885-5p 1 0 0
chr8:143274500|143274676 hsa-miR-939-5p 1 1 0
chr8:143274500|143274676 hsa-miR-3940-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6758-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6856-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6855-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3173-3p 1 0 0
chr8:143274500|143274676 hsa-miR-4646-5p 1 1 0
chr8:143274500|143274676 hsa-miR-4747-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6876-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6891-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6785-5p 1 1 0
chr8:143274500|143274676 hsa-miR-4667-5p 1 0 0
chr8:143274500|143274676 hsa-miR-3689d 0 1 0
chr8:143274500|143274676 hsa-miR-6724-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6791-5p 1 0 0
chr8:143274500|143274676 hsa-miR-6762-5p 1 1 0
chr8:143274500|143274676 hsa-miR-6718-5p 1 1 0
chr8:143274500|143274676 hsa-miR-708-5p 1 0 0
chr8:143274500|143274676 hsa-miR-2682-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr8:143274500|143274676
ORF Type ORF1
Protein Length 56
Nucleotide Length 168
Protein Sequence MDHCLRSSLTATCSRAVALTQDTSWPSQSQQQARCLGFSSHECPLPSFPARFKSLL
Nucleotide Sequence CTGGACCACTGCCTCCGCTCCTCTCTGACCGCCACGTGCTCCCGGGCTGTGGCCCTGACACAGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTGGGCTTCTCTAGCCACGAATGCCCTTTACCTTCCTTCCCAGCTCGGTTCAAGAGCCTCCTC
CircID chr8:143274500|143274676
ORF Type ORF2
Protein Length 36
Nucleotide Length 111
Protein Sequence MPPLLSDRHVLPGCGPDTGHLLALPIPTAGPLLGLL
Nucleotide Sequence CTGCCTCCGCTCCTCTCTGACCGCCACGTGCTCCCGGGCTGTGGCCCTGACACAGGACACCTCCTGGCCCTCCCAATCCCAACAGCAGGCCCGCTGCTTGGGCTTCTCTAG
CircID chr8:143274500|143274676
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MLLGLGGPGGVLCQGHSPGARGGQRGAEAVVQRVE
Nucleotide Sequence CTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCTGTGTCAGGGCCACAGCCCGGGAGCACGTGGCGGTCAGAGAGGAGCGGAGGCAGTGGTCCAGAGGGTGGAG
CircID chr8:143274500|143274676
ORF Type ORF4
Protein Length 55
Nucleotide Length 165
Protein Sequence MNRAGKEGKGHSWLEKPKQRACCWDWEGQEVSCVRATAREHVAVREERRQWSRGW
Nucleotide Sequence TTGAACCGAGCTGGGAAGGAAGGTAAAGGGCATTCGTGGCTAGAGAAGCCCAAGCAGCGGGCCTGCTGTTGGGATTGGGAGGGCCAGGAGGTGTCCTGTGTCAGGGCCACAGCCCGGGAGCACGTGGCGGTCAGAGAGGAGCGGAGGCAGTGGTCCAGAGGGTGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab