CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143437824|143437933
Strand -
CircType exon
Host Gene ENSG00000014164.6;
Algorism CIRI2;
Sequence CCTGGAAGGTGGTGGGGTGGGGACAGGGGCCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143437824|143437933 hsa-miR-328-5p 0 0 1
chr8:143437824|143437933 hsa-miR-328-3p 0 0 1
chr8:143437824|143437933 hsa-miR-661 1 0 1
chr8:143437824|143437933 hsa-miR-933 1 1 1
chr8:143437824|143437933 hsa-miR-1291 1 0 1
chr8:143437824|143437933 hsa-miR-339-5p 0 1 1
chr8:143437824|143437933 hsa-miR-361-3p 0 0 1
chr8:143437824|143437933 hsa-miR-220b 0 0 1
chr8:143437824|143437933 hsa-miR-1254 0 0 1
chr8:143437824|143437933 hsa-miR-484 0 1 0
chr8:143437824|143437933 hsa-miR-596 1 0 0
chr8:143437824|143437933 hsa-miR-1260a 1 0 0
chr8:143437824|143437933 hsa-miR-718 1 0 0
chr8:143437824|143437933 hsa-miR-1260b 1 0 0
chr8:143437824|143437933 hsa-miR-5193 1 0 0
chr8:143437824|143437933 hsa-miR-6132 0 1 0
chr8:143437824|143437933 hsa-miR-8073 1 0 0
chr8:143437824|143437933 hsa-miR-6749-3p 1 1 0
chr8:143437824|143437933 hsa-miR-3194-3p 1 1 0
chr8:143437824|143437933 hsa-miR-6747-3p 1 1 0
chr8:143437824|143437933 hsa-miR-6836-3p 1 0 0
chr8:143437824|143437933 hsa-miR-210-5p 1 1 0
chr8:143437824|143437933 hsa-miR-6875-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6762-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6849-3p 1 0 0
chr8:143437824|143437933 hsa-miR-1915-5p 1 0 0
chr8:143437824|143437933 hsa-miR-423-3p 1 0 0
chr8:143437824|143437933 hsa-miR-4633-5p 1 0 0
chr8:143437824|143437933 hsa-miR-4713-5p 0 1 0
chr8:143437824|143437933 hsa-miR-939-3p 1 0 0
chr8:143437824|143437933 hsa-miR-4763-5p 1 1 0
chr8:143437824|143437933 hsa-miR-4707-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6894-3p 1 1 0
chr8:143437824|143437933 hsa-miR-5001-3p 1 1 0
chr8:143437824|143437933 hsa-miR-7113-3p 1 0 0
chr8:143437824|143437933 hsa-miR-3191-5p 1 0 0
chr8:143437824|143437933 hsa-miR-1914-5p 1 0 0
chr8:143437824|143437933 hsa-miR-6738-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6748-3p 1 1 0
chr8:143437824|143437933 hsa-miR-4433a-5p 1 0 0
chr8:143437824|143437933 hsa-miR-3173-5p 1 0 0
chr8:143437824|143437933 hsa-miR-4433b-5p 1 0 0
chr8:143437824|143437933 hsa-miR-3162-3p 1 1 0
chr8:143437824|143437933 hsa-miR-6836-5p 0 1 0
chr8:143437824|143437933 hsa-miR-1271-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6791-3p 1 0 0
chr8:143437824|143437933 hsa-miR-193b-3p 1 1 0
chr8:143437824|143437933 hsa-miR-6805-3p 1 1 0
chr8:143437824|143437933 hsa-miR-6775-3p 1 0 0
chr8:143437824|143437933 hsa-miR-4723-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6819-3p 1 1 0
chr8:143437824|143437933 hsa-miR-3085-3p 1 0 0
chr8:143437824|143437933 hsa-miR-6744-3p 0 1 0
chr8:143437824|143437933 hsa-miR-6807-3p 1 0 0
chr8:143437824|143437933 hsa-miR-550a-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:143437824|143437933
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MAWGRKTRPCAHAGHGRLRARQAEQC
Nucleotide Sequence CTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGT

CircID chr8:143437824|143437933
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence LEGGGVGTGAWLGGGRPGPAHTLVMEG
Nucleotide Sequence CTGGAAGGTGGTGGGGTGGGGACAGGGGCCTGGCTTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGA

CircID chr8:143437824|143437933
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MGEEDQALRTRWSWKVEGQAGRAVS
Nucleotide Sequence TTGGGGGAGGAAGACCAGGCCCTGCGCACACGCTGGTCATGGAAGGTTGAGGGCCAGGCAGGCAGAGCAGTGTCC

CircID chr8:143437824|143437933
ORF Type ORF4
Protein Length 33
Nucleotide Length 99
Protein Sequence MPAWPSTFHDQRVRRAWSSSPKPGPCPHPTTFQ
Nucleotide Sequence CTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGGCCCCTGTCCCCACCCCACCACCTTCCAG

CircID chr8:143437824|143437933
ORF Type ORF5
Protein Length 35
Nucleotide Length 105
Protein Sequence MLCLPGPQPSMTSVCAGPGLPPPSQAPVPTPPPSR
Nucleotide Sequence CTGCTCTGCCTGCCTGGCCCTCAACCTTCCATGACCAGCGTGTGCGCAGGGCCTGGTCTTCCTCCCCCAAGCCAGGCCCCTGTCCCCACCCCACCACCTTCCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites