CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143566264|143566506
Strand -
CircType exon
Host Gene ENSG00000204839.7;
Algorism CIRI2;
Sequence GCCTGTGCCTGAGGGGCCCCAGTCTGGGCAAGTGGTCCCAGCCCTTCACAAGGCTGCACACACTCCCTGTGCACTCGCAGAGGCTTCTCTGAGGAGGAGGCTGTGAAGGAGGCCACGAATGCAAGGACATTTCCAGGCAGGCATCCTAGGTGCAGGGACCTGCCGCCCAAAGCCAGAGAGGTGAGGTCACAGCATCAGTAGCTCCCAGAGCAGCCTCTTCCTCATGTGTCCAGTGGCGCGTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143566264|143566506 hsa-miR-27a-5p 0 0 1
chr8:143566264|143566506 hsa-miR-27a-3p 0 0 1
chr8:143566264|143566506 hsa-miR-33a-5p 0 0 1
chr8:143566264|143566506 hsa-miR-33a-3p 0 0 1
chr8:143566264|143566506 hsa-miR-205-5p 0 0 1
chr8:143566264|143566506 hsa-miR-205-3p 0 0 1
chr8:143566264|143566506 hsa-miR-27b-5p 0 0 1
chr8:143566264|143566506 hsa-miR-27b-3p 0 0 1
chr8:143566264|143566506 hsa-miR-122-5p 0 0 1
chr8:143566264|143566506 hsa-miR-122-3p 0 0 1
chr8:143566264|143566506 hsa-miR-149-5p 0 0 1
chr8:143566264|143566506 hsa-miR-149-3p 0 0 1
chr8:143566264|143566506 hsa-miR-326 0 0 1
chr8:143566264|143566506 hsa-miR-523-5p 0 0 1
chr8:143566264|143566506 hsa-miR-523-3p 0 0 1
chr8:143566264|143566506 hsa-miR-33b-5p 0 0 1
chr8:143566264|143566506 hsa-miR-33b-3p 0 0 1
chr8:143566264|143566506 hsa-miR-661 1 0 1
chr8:143566264|143566506 hsa-miR-920 0 1 1
chr8:143566264|143566506 hsa-miR-1204 0 1 1
chr8:143566264|143566506 hsa-miR-1265 0 0 1
chr8:143566264|143566506 hsa-miR-296-5p 0 0 1
chr8:143566264|143566506 hsa-miR-485-5p 0 0 1
chr8:143566264|143566506 hsa-miR-574-5p 0 1 1
chr8:143566264|143566506 hsa-miR-502-5p 0 0 1
chr8:143566264|143566506 hsa-miR-513a-5p 0 0 1
chr8:143566264|143566506 hsa-miR-875-3p 0 0 1
chr8:143566264|143566506 hsa-miR-330-5p 0 0 1
chr8:143566264|143566506 hsa-miR-220c 0 0 1
chr8:143566264|143566506 hsa-miR-1254 0 0 1
chr8:143566264|143566506 hsa-miR-346 1 0 0
chr8:143566264|143566506 hsa-miR-637 1 1 0
chr8:143566264|143566506 hsa-miR-762 1 1 0
chr8:143566264|143566506 hsa-miR-760 1 0 0
chr8:143566264|143566506 hsa-miR-933 1 0 0
chr8:143566264|143566506 hsa-miR-3137 1 0 0
chr8:143566264|143566506 hsa-miR-3138 0 1 0
chr8:143566264|143566506 hsa-miR-3196 1 0 0
chr8:143566264|143566506 hsa-miR-4269 0 1 0
chr8:143566264|143566506 hsa-miR-4270 0 1 0
chr8:143566264|143566506 hsa-miR-3654 0 1 0
chr8:143566264|143566506 hsa-miR-4463 0 1 0
chr8:143566264|143566506 hsa-miR-3689e 1 0 0
chr8:143566264|143566506 hsa-miR-4489 1 1 0
chr8:143566264|143566506 hsa-miR-4492 0 1 0
chr8:143566264|143566506 hsa-miR-4494 0 1 0
chr8:143566264|143566506 hsa-miR-4736 0 1 0
chr8:143566264|143566506 hsa-miR-4741 1 0 0
chr8:143566264|143566506 hsa-miR-5691 0 1 0
chr8:143566264|143566506 hsa-miR-6068 0 1 0
chr8:143566264|143566506 hsa-miR-6077 0 1 0
chr8:143566264|143566506 hsa-miR-6085 1 0 0
chr8:143566264|143566506 hsa-miR-8089 1 0 0
chr8:143566264|143566506 hsa-miR-92a-1-5p 0 1 0
chr8:143566264|143566506 hsa-miR-3194-3p 1 0 0
chr8:143566264|143566506 hsa-miR-3192-5p 0 1 0
chr8:143566264|143566506 hsa-miR-769-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6867-5p 1 1 0
chr8:143566264|143566506 hsa-miR-874-5p 1 0 0
chr8:143566264|143566506 hsa-miR-4728-3p 1 0 0
chr8:143566264|143566506 hsa-miR-6841-3p 0 1 0
chr8:143566264|143566506 hsa-miR-7108-5p 1 0 0
chr8:143566264|143566506 hsa-miR-3130-3p 0 1 0
chr8:143566264|143566506 hsa-miR-619-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6821-3p 1 0 0
chr8:143566264|143566506 hsa-miR-6878-3p 1 1 0
chr8:143566264|143566506 hsa-miR-4446-3p 0 1 0
chr8:143566264|143566506 hsa-miR-3162-5p 1 0 0
chr8:143566264|143566506 hsa-miR-7156-3p 0 1 0
chr8:143566264|143566506 hsa-miR-4695-3p 1 0 0
chr8:143566264|143566506 hsa-miR-6800-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6790-3p 1 0 0
chr8:143566264|143566506 hsa-miR-500a-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6808-3p 0 1 0
chr8:143566264|143566506 hsa-miR-4763-3p 1 0 0
chr8:143566264|143566506 hsa-miR-6816-5p 0 1 0
chr8:143566264|143566506 hsa-miR-5001-5p 0 1 0
chr8:143566264|143566506 hsa-miR-6726-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6752-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6803-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6774-5p 0 1 0
chr8:143566264|143566506 hsa-miR-3620-5p 1 0 0
chr8:143566264|143566506 hsa-miR-5189-5p 0 1 0
chr8:143566264|143566506 hsa-miR-642b-3p 0 1 0
chr8:143566264|143566506 hsa-miR-4745-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6858-5p 1 1 0
chr8:143566264|143566506 hsa-miR-939-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6791-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6877-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6849-5p 1 0 0
chr8:143566264|143566506 hsa-miR-769-3p 1 0 0
chr8:143566264|143566506 hsa-miR-4757-5p 0 1 0
chr8:143566264|143566506 hsa-miR-6792-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6829-3p 1 1 0
chr8:143566264|143566506 hsa-miR-4723-3p 0 1 0
chr8:143566264|143566506 hsa-miR-6744-3p 1 0 0
chr8:143566264|143566506 hsa-miR-6781-3p 0 1 0
chr8:143566264|143566506 hsa-miR-642a-3p 0 1 0
chr8:143566264|143566506 hsa-miR-7162-5p 0 1 0
chr8:143566264|143566506 hsa-miR-3689a-5p 1 0 0
chr8:143566264|143566506 hsa-miR-3689b-5p 1 0 0
chr8:143566264|143566506 hsa-miR-6820-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143566264|143566506
ORF Type ORF1
Protein Length 44
Nucleotide Length 135
Protein Sequence MCTRRGFSEEEAVKEATNARTFPGRHPRCRDLPPKAREVRSQHQ
Nucleotide Sequence CTGTGCACTCGCAGAGGCTTCTCTGAGGAGGAGGCTGTGAAGGAGGCCACGAATGCAAGGACATTTCCAGGCAGGCATCCTAGGTGCAGGGACCTGCCGCCCAAAGCCAGAGAGGTGAGGTCACAGCATCAGTAG

CircID chr8:143566264|143566506
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence LCLRGPSLGKWSQPFTRLHTLPVHSQRLL
Nucleotide Sequence CTGTGCCTGAGGGGCCCCAGTCTGGGCAAGTGGTCCCAGCCCTTCACAAGGCTGCACACACTCCCTGTGCACTCGCAGAGGCTTCTCTGA

CircID chr8:143566264|143566506
ORF Type ORF3
Protein Length 32
Nucleotide Length 99
Protein Sequence MPAWKCPCIRGLLHSLLLREASASAQGVCAAL
Nucleotide Sequence ATGCCTGCCTGGAAATGTCCTTGCATTCGTGGCCTCCTTCACAGCCTCCTCCTCAGAGAAGCCTCTGCGAGTGCACAGGGAGTGTGTGCAGCCTTGTGA

CircID chr8:143566264|143566506
ORF Type ORF4
Protein Length 58
Nucleotide Length 174
Protein Sequence MALGGRSLHLGCLPGNVLAFVASFTASSSEKPLRVHRECVQPCEGLGPLAQTGAPQAQ
Nucleotide Sequence CTGGCTTTGGGCGGCAGGTCCCTGCACCTAGGATGCCTGCCTGGAAATGTCCTTGCATTCGTGGCCTCCTTCACAGCCTCCTCCTCAGAGAAGCCTCTGCGAGTGCACAGGGAGTGTGTGCAGCCTTGTGAAGGGCTGGGACCACTTGCCCAGACTGGGGCCCCTCAGGCACAG

CircID chr8:143566264|143566506
ORF Type ORF5
Protein Length 45
Nucleotide Length 135
Protein Sequence MEMSLHSWPPSQPPPQRSLCECTGSVCSLVKGWDHLPRLGPLRHR
Nucleotide Sequence CTGGAAATGTCCTTGCATTCGTGGCCTCCTTCACAGCCTCCTCCTCAGAGAAGCCTCTGCGAGTGCACAGGGAGTGTGTGCAGCCTTGTGAAGGGCTGGGACCACTTGCCCAGACTGGGGCCCCTCAGGCACAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites