CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143576271|143576411
Strand -
CircType exon
Host Gene ENSG00000147813.14;
Algorism CIRI2;
Sequence CTTCTGCTTGGGAGCTCCTAGGGAGCCCCACCACTTACTTCCCTGCCACGGCCTGCAGTATCACCGCTGAAACTTCAGCAGAGTACCTCACTGTCCTTCCCTGCCCATTCCCAAACCCCGGGGATCTCCCACCAGGCACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143576271|143576411 hsa-let-7b-5p 0 0 1
chr8:143576271|143576411 hsa-let-7b-3p 0 0 1
chr8:143576271|143576411 hsa-let-7c-5p 0 0 1
chr8:143576271|143576411 hsa-let-7c-3p 0 0 1
chr8:143576271|143576411 hsa-let-7d-5p 0 0 1
chr8:143576271|143576411 hsa-let-7d-3p 0 0 1
chr8:143576271|143576411 hsa-let-7e-5p 0 0 1
chr8:143576271|143576411 hsa-let-7e-3p 0 0 1
chr8:143576271|143576411 hsa-miR-98-5p 0 0 1
chr8:143576271|143576411 hsa-miR-98-3p 0 0 1
chr8:143576271|143576411 hsa-miR-217-5p 0 0 1
chr8:143576271|143576411 hsa-miR-217-3p 0 0 1
chr8:143576271|143576411 hsa-let-7g-5p 0 0 1
chr8:143576271|143576411 hsa-let-7g-3p 0 0 1
chr8:143576271|143576411 hsa-let-7i-5p 0 0 1
chr8:143576271|143576411 hsa-let-7i-3p 0 0 1
chr8:143576271|143576411 hsa-miR-150-5p 0 0 1
chr8:143576271|143576411 hsa-miR-150-3p 0 0 1
chr8:143576271|143576411 hsa-miR-202-5p 0 0 1
chr8:143576271|143576411 hsa-miR-202-3p 0 0 1
chr8:143576271|143576411 hsa-miR-661 0 0 1
chr8:143576271|143576411 hsa-miR-298 0 0 1
chr8:143576271|143576411 hsa-miR-541-5p 0 0 1
chr8:143576271|143576411 hsa-miR-541-3p 0 0 1
chr8:143576271|143576411 hsa-miR-708-5p 0 0 1
chr8:143576271|143576411 hsa-miR-708-3p 0 0 1
chr8:143576271|143576411 hsa-miR-1205 0 0 1
chr8:143576271|143576411 hsa-miR-1294 0 1 1
chr8:143576271|143576411 hsa-miR-654-5p 0 0 1
chr8:143576271|143576411 hsa-miR-28-5p 0 1 1
chr8:143576271|143576411 hsa-miR-1207-5p 1 1 1
chr8:143576271|143576411 hsa-miR-509-3-5p 1 1 1
chr8:143576271|143576411 hsa-miR-509-5p 1 1 1
chr8:143576271|143576411 hsa-miR-550 0 0 1
chr8:143576271|143576411 hsa-let-7a 0 0 1
chr8:143576271|143576411 hsa-let-7f 0 0 1
chr8:143576271|143576411 hsa-miR-1254 0 0 1
chr8:143576271|143576411 hsa-miR-923 0 0 1
chr8:143576271|143576411 hsa-miR-612 1 0 0
chr8:143576271|143576411 hsa-miR-637 1 0 0
chr8:143576271|143576411 hsa-miR-762 1 0 0
chr8:143576271|143576411 hsa-miR-760 1 0 0
chr8:143576271|143576411 hsa-miR-940 1 0 0
chr8:143576271|143576411 hsa-miR-1183 1 1 0
chr8:143576271|143576411 hsa-miR-1268a 1 0 0
chr8:143576271|143576411 hsa-miR-3122 1 0 0
chr8:143576271|143576411 hsa-miR-3132 1 0 0
chr8:143576271|143576411 hsa-miR-3137 1 0 0
chr8:143576271|143576411 hsa-miR-3138 1 0 0
chr8:143576271|143576411 hsa-miR-3139 0 1 0
chr8:143576271|143576411 hsa-miR-3141 1 0 0
chr8:143576271|143576411 hsa-miR-3147 1 0 0
chr8:143576271|143576411 hsa-miR-3155a 1 0 0
chr8:143576271|143576411 hsa-miR-4270 1 0 0
chr8:143576271|143576411 hsa-miR-1268b 1 0 0
chr8:143576271|143576411 hsa-miR-4440 1 0 0
chr8:143576271|143576411 hsa-miR-3689f 1 0 0
chr8:143576271|143576411 hsa-miR-4505 1 0 0
chr8:143576271|143576411 hsa-miR-4507 1 0 0
chr8:143576271|143576411 hsa-miR-4522 1 0 0
chr8:143576271|143576411 hsa-miR-4525 1 0 0
chr8:143576271|143576411 hsa-miR-1587 1 0 0
chr8:143576271|143576411 hsa-miR-4686 0 1 0
chr8:143576271|143576411 hsa-miR-4688 1 0 0
chr8:143576271|143576411 hsa-miR-4706 1 1 0
chr8:143576271|143576411 hsa-miR-4734 1 1 0
chr8:143576271|143576411 hsa-miR-4739 1 1 0
chr8:143576271|143576411 hsa-miR-4748 1 0 0
chr8:143576271|143576411 hsa-miR-5090 1 0 0
chr8:143576271|143576411 hsa-miR-5787 1 0 0
chr8:143576271|143576411 hsa-miR-6860 1 0 0
chr8:143576271|143576411 hsa-miR-7150 1 1 0
chr8:143576271|143576411 hsa-miR-7974 1 0 0
chr8:143576271|143576411 hsa-miR-8072 1 0 0
chr8:143576271|143576411 hsa-miR-8080 0 1 0
chr8:143576271|143576411 hsa-miR-8085 1 0 0
chr8:143576271|143576411 hsa-miR-9500 0 1 0
chr8:143576271|143576411 hsa-miR-9986 0 1 0
chr8:143576271|143576411 hsa-miR-211-3p 1 0 0
chr8:143576271|143576411 hsa-miR-4433b-3p 1 0 0
chr8:143576271|143576411 hsa-miR-92a-2-5p 0 1 0
chr8:143576271|143576411 hsa-miR-128-1-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6747-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6861-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6857-5p 1 0 0
chr8:143576271|143576411 hsa-miR-1972 1 0 0
chr8:143576271|143576411 hsa-miR-4687-3p 1 0 0
chr8:143576271|143576411 hsa-miR-6510-5p 0 1 0
chr8:143576271|143576411 hsa-miR-6728-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6757-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6727-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6721-5p 1 1 0
chr8:143576271|143576411 hsa-miR-197-5p 1 0 0
chr8:143576271|143576411 hsa-miR-7108-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6716-5p 1 1 0
chr8:143576271|143576411 hsa-miR-6871-5p 1 0 0
chr8:143576271|143576411 hsa-miR-1292-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6821-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6786-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6740-5p 1 1 0
chr8:143576271|143576411 hsa-miR-1229-5p 1 0 0
chr8:143576271|143576411 hsa-miR-193b-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6784-5p 1 0 0
chr8:143576271|143576411 hsa-miR-1908-5p 1 1 0
chr8:143576271|143576411 hsa-miR-1228-5p 1 0 0
chr8:143576271|143576411 hsa-miR-149-3p 1 0 0
chr8:143576271|143576411 hsa-miR-3162-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6802-5p 1 0 0
chr8:143576271|143576411 hsa-miR-550b-2-5p 0 1 0
chr8:143576271|143576411 hsa-miR-7112-5p 1 0 0
chr8:143576271|143576411 hsa-miR-1225-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4707-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4746-3p 1 1 0
chr8:143576271|143576411 hsa-miR-598-5p 0 1 0
chr8:143576271|143576411 hsa-miR-431-3p 1 0 0
chr8:143576271|143576411 hsa-miR-1233-5p 1 1 0
chr8:143576271|143576411 hsa-miR-4763-3p 1 1 0
chr8:143576271|143576411 hsa-miR-6778-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6787-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6816-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6743-5p 1 0 0
chr8:143576271|143576411 hsa-miR-10401-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6722-3p 1 0 0
chr8:143576271|143576411 hsa-miR-6763-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6779-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6780a-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6797-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6808-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6879-5p 1 1 0
chr8:143576271|143576411 hsa-miR-3620-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4728-5p 1 0 0
chr8:143576271|143576411 hsa-miR-5196-5p 1 1 0
chr8:143576271|143576411 hsa-miR-6780b-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6836-5p 1 0 0
chr8:143576271|143576411 hsa-miR-10396b-5p 1 0 0
chr8:143576271|143576411 hsa-miR-1909-3p 1 0 0
chr8:143576271|143576411 hsa-miR-4649-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4745-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4749-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6729-5p 1 0 0
chr8:143576271|143576411 hsa-miR-3187-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4436b-3p 1 0 0
chr8:143576271|143576411 hsa-miR-4758-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6511b-5p 1 1 0
chr8:143576271|143576411 hsa-miR-3940-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6855-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4700-5p 1 0 0
chr8:143576271|143576411 hsa-miR-4747-5p 0 1 0
chr8:143576271|143576411 hsa-miR-6750-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6791-5p 1 0 0
chr8:143576271|143576411 hsa-miR-550a-3-5p 0 1 0
chr8:143576271|143576411 hsa-miR-550a-5p 0 1 0
chr8:143576271|143576411 hsa-miR-769-3p 0 1 0
chr8:143576271|143576411 hsa-miR-10394-5p 1 1 0
chr8:143576271|143576411 hsa-miR-3619-5p 1 0 0
chr8:143576271|143576411 hsa-miR-6811-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143576271|143576411
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MPRPAVSPLKLQQSTSLSFPAHSQTPGISHQAH
Nucleotide Sequence CTGCCACGGCCTGCAGTATCACCGCTGAAACTTCAGCAGAGTACCTCACTGTCCTTCCCTGCCCATTCCCAAACCCCGGGGATCTCCCACCAGGCACAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab