CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143576506|143576715
Strand -
CircType exon
Host Gene ENSG00000255050.1;
Algorism CIRI2;
Sequence GCCCACTGCCCGGTAGCCCAGCTCTCCCAGGGCCAGGGCGACTGCTAGGAAGTTGGGGAGACCACTCCTGCAGAAATAGATAAGGGAGTCAGAGGCTGCTGAGGTTCTGCTGAGCCCACCCCTAAAGTGCCCGGGCTCACCTCCACACGCTGTAGGTGTCCAGGAGGCCCTGGAAGGCCCGGGGAAAAGCCAAGGCATAGGCCACAAAGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143576506|143576715 hsa-miR-34a-5p 0 0 1
chr8:143576506|143576715 hsa-miR-34a-3p 0 0 1
chr8:143576506|143576715 hsa-miR-214-5p 0 0 1
chr8:143576506|143576715 hsa-miR-214-3p 0 0 1
chr8:143576506|143576715 hsa-miR-328-5p 0 0 1
chr8:143576506|143576715 hsa-miR-328-3p 0 0 1
chr8:143576506|143576715 hsa-miR-345-5p 0 0 1
chr8:143576506|143576715 hsa-miR-345-3p 0 0 1
chr8:143576506|143576715 hsa-miR-384 0 0 1
chr8:143576506|143576715 hsa-miR-449a 0 0 1
chr8:143576506|143576715 hsa-miR-608 0 1 1
chr8:143576506|143576715 hsa-miR-449b-5p 0 0 1
chr8:143576506|143576715 hsa-miR-449b-3p 0 0 1
chr8:143576506|143576715 hsa-miR-541-5p 0 0 1
chr8:143576506|143576715 hsa-miR-541-3p 0 0 1
chr8:143576506|143576715 hsa-miR-922 0 0 1
chr8:143576506|143576715 hsa-miR-663b 0 0 1
chr8:143576506|143576715 hsa-miR-1205 0 0 1
chr8:143576506|143576715 hsa-miR-1286 0 0 1
chr8:143576506|143576715 hsa-miR-1291 0 0 1
chr8:143576506|143576715 hsa-miR-1249-5p 0 0 1
chr8:143576506|143576715 hsa-miR-1249-3p 0 0 1
chr8:143576506|143576715 hsa-miR-1225-3p 0 0 1
chr8:143576506|143576715 hsa-miR-1184 0 0 1
chr8:143576506|143576715 hsa-miR-654-5p 1 1 1
chr8:143576506|143576715 hsa-miR-532-5p 0 0 1
chr8:143576506|143576715 hsa-miR-34c-5p 0 0 1
chr8:143576506|143576715 hsa-miR-1233 0 0 1
chr8:143576506|143576715 hsa-miR-544 0 0 1
chr8:143576506|143576715 hsa-miR-24 0 0 1
chr8:143576506|143576715 hsa-miR-612 1 0 0
chr8:143576506|143576715 hsa-miR-4300 0 1 0
chr8:143576506|143576715 hsa-miR-4321 0 1 0
chr8:143576506|143576715 hsa-miR-4274 0 1 0
chr8:143576506|143576715 hsa-miR-4487 1 1 0
chr8:143576506|143576715 hsa-miR-4512 0 1 0
chr8:143576506|143576715 hsa-miR-4651 0 1 0
chr8:143576506|143576715 hsa-miR-4674 0 1 0
chr8:143576506|143576715 hsa-miR-4433a-3p 0 1 0
chr8:143576506|143576715 hsa-miR-212-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6089 1 0 0
chr8:143576506|143576715 hsa-miR-3192-5p 0 1 0
chr8:143576506|143576715 hsa-miR-4722-5p 0 1 0
chr8:143576506|143576715 hsa-miR-874-3p 1 1 0
chr8:143576506|143576715 hsa-miR-6726-3p 0 1 0
chr8:143576506|143576715 hsa-miR-7108-5p 1 0 0
chr8:143576506|143576715 hsa-miR-6782-5p 1 1 0
chr8:143576506|143576715 hsa-miR-4633-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6735-3p 1 0 0
chr8:143576506|143576715 hsa-miR-6882-3p 1 0 0
chr8:143576506|143576715 hsa-miR-6763-3p 0 1 0
chr8:143576506|143576715 hsa-miR-1908-3p 1 0 0
chr8:143576506|143576715 hsa-miR-30c-2-3p 0 1 0
chr8:143576506|143576715 hsa-miR-5004-3p 0 1 0
chr8:143576506|143576715 hsa-miR-4787-5p 1 0 0
chr8:143576506|143576715 hsa-miR-4638-3p 0 1 0
chr8:143576506|143576715 hsa-miR-6871-3p 1 0 0
chr8:143576506|143576715 hsa-miR-3617-3p 0 1 0
chr8:143576506|143576715 hsa-miR-1343-5p 1 0 0
chr8:143576506|143576715 hsa-miR-5001-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6737-5p 1 0 0
chr8:143576506|143576715 hsa-miR-6803-5p 1 1 0
chr8:143576506|143576715 hsa-miR-6842-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6851-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6751-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6779-5p 0 1 0
chr8:143576506|143576715 hsa-miR-3620-5p 1 0 0
chr8:143576506|143576715 hsa-miR-4745-5p 1 0 0
chr8:143576506|143576715 hsa-miR-939-5p 1 1 0
chr8:143576506|143576715 hsa-miR-30c-1-3p 0 1 0
chr8:143576506|143576715 hsa-miR-6731-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6791-3p 0 1 0
chr8:143576506|143576715 hsa-miR-6877-3p 1 1 0
chr8:143576506|143576715 hsa-miR-6766-5p 0 1 0
chr8:143576506|143576715 hsa-miR-3689d 0 1 0
chr8:143576506|143576715 hsa-miR-6724-5p 1 0 0
chr8:143576506|143576715 hsa-miR-6791-5p 1 1 0
chr8:143576506|143576715 hsa-miR-6837-5p 0 1 0
chr8:143576506|143576715 hsa-miR-6819-3p 1 1 0
chr8:143576506|143576715 hsa-miR-5581-5p 0 1 0
chr8:143576506|143576715 hsa-miR-203b-5p 0 1 0
chr8:143576506|143576715 hsa-miR-548b-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143576506|143576715
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MLSPPLKCPGSPPHAVGVQEALEGPGKSQGIGHK
Nucleotide Sequence CTGCTGAGCCCACCCCTAAAGTGCCCGGGCTCACCTCCACACGCTGTAGGTGTCCAGGAGGCCCTGGAAGGCCCGGGGAAAAGCCAAGGCATAGGCCACAAA

CircID chr8:143576506|143576715
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MPGSPALPGPGRLLGSWGDHSCRNR
Nucleotide Sequence CTGCCCGGTAGCCCAGCTCTCCCAGGGCCAGGGCGACTGCTAGGAAGTTGGGGAGACCACTCCTGCAGAAATAGATAA

CircID chr8:143576506|143576715
ORF Type ORF3
Protein Length 69
Nucleotide Length 207
Protein Sequence MWPMPWLFPGPSRASWTPTACGGEPGHFRGGLSRTSAASDSLIYFCRSGLPNFLAVALALGELGYRAVG
Nucleotide Sequence TTGTGGCCTATGCCTTGGCTTTTCCCCGGGCCTTCCAGGGCCTCCTGGACACCTACAGCGTGTGGAGGTGAGCCCGGGCACTTTAGGGGTGGGCTCAGCAGAACCTCAGCAGCCTCTGACTCCCTTATCTATTTCTGCAGGAGTGGTCTCCCCAACTTCCTAGCAGTCGCCCTGGCCCTGGGAGAGCTGGGCTACCGGGCAGTGGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites