CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143580545|143580661
Strand +
CircType exon
Host Gene ENSG00000279605.1;
Algorism CIRI2;
Sequence GAGGATGATGACATTGACCTGTTTGGCAGTGACAATGAGGAGGAGGACAAGGAGGCGGCACAGCTGCGGGAGGAGCGGCTACGGCAGTACGCGGAGAAGAAGGCCAAGAAGCCTGCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143580545|143580661 hsa-miR-668-5p 0 0 1
chr8:143580545|143580661 hsa-miR-668-3p 0 0 1
chr8:143580545|143580661 hsa-miR-942-5p 0 0 1
chr8:143580545|143580661 hsa-miR-942-3p 0 0 1
chr8:143580545|143580661 hsa-miR-1248 0 1 1
chr8:143580545|143580661 hsa-miR-1281 1 1 1
chr8:143580545|143580661 hsa-miR-1913 1 0 0
chr8:143580545|143580661 hsa-miR-4268 1 1 0
chr8:143580545|143580661 hsa-miR-3909 1 0 0
chr8:143580545|143580661 hsa-miR-5193 1 1 0
chr8:143580545|143580661 hsa-miR-7974 1 0 0
chr8:143580545|143580661 hsa-miR-12116 1 0 0
chr8:143580545|143580661 hsa-miR-6749-3p 0 1 0
chr8:143580545|143580661 hsa-miR-149-5p 1 0 0
chr8:143580545|143580661 hsa-miR-6881-3p 1 0 0
chr8:143580545|143580661 hsa-miR-877-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6868-3p 0 1 0
chr8:143580545|143580661 hsa-miR-6882-3p 1 0 0
chr8:143580545|143580661 hsa-miR-5001-3p 1 0 0
chr8:143580545|143580661 hsa-miR-339-5p 1 0 0
chr8:143580545|143580661 hsa-miR-1236-3p 1 1 0
chr8:143580545|143580661 hsa-miR-6743-3p 1 1 0
chr8:143580545|143580661 hsa-miR-6889-3p 0 1 0
chr8:143580545|143580661 hsa-miR-4632-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6886-3p 1 0 0
chr8:143580545|143580661 hsa-miR-328-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6880-3p 1 1 0
chr8:143580545|143580661 hsa-miR-1227-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6852-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6791-3p 1 1 0
chr8:143580545|143580661 hsa-miR-2682-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6829-3p 1 1 0
chr8:143580545|143580661 hsa-miR-4723-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6529-3p 0 1 0
chr8:143580545|143580661 hsa-miR-6769b-3p 1 0 0
chr8:143580545|143580661 hsa-miR-6781-3p 1 1 0
chr8:143580545|143580661 hsa-miR-6827-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:143580545|143580661
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MFGSDNEEEDKEAAQLREERLRQYAEKKAKKPA
Nucleotide Sequence CTGTTTGGCAGTGACAATGAGGAGGAGGACAAGGAGGCGGCACAGCTGCGGGAGGAGCGGCTACGGCAGTACGCGGAGAAGAAGGCCAAGAAGCCTGCA

CircID chr8:143580545|143580661
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MMTLTCLAVTMRRRTRRRHSCGRSGYGSTRRRRPRSL
Nucleotide Sequence ATGATGACATTGACCTGTTTGGCAGTGACAATGAGGAGGAGGACAAGGAGGCGGCACAGCTGCGGGAGGAGCGGCTACGGCAGTACGCGGAGAAGAAGGCCAAGAAGCCTG

CircID chr8:143580545|143580661
ORF Type ORF3
Protein Length 35
Nucleotide Length 105
Protein Sequence MAFFSAYCRSRSSRSCAASLSSSSLSLPNRSMSSS
Nucleotide Sequence TTGGCCTTCTTCTCCGCGTACTGCCGTAGCCGCTCCTCCCGCAGCTGTGCCGCCTCCTTGTCCTCCTCCTCATTGTCACTGCCAAACAGGTCAATGTCATCATCC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites