CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143816743|143816975
Strand -
CircType exon
Host Gene ENSG00000179950.12;
Algorism CIRI2;
Sequence TCCTCTGTCACCTCCCCTTCCAGGTCATCATCGATGTCCTTGGGGTCCACCATGTTGCGCAGAACCATCACTGTAGACTGTGGGGCAGGGCCGAGGGGAAGACAGCTGAGCACTGCGGCCCCGCCCCCCTACCCTCTCCCCCGCCACCACCCTGCCCCTCTGCCTACCTCCTGCTTGCGGAGCAGCTTCTGCATCACCATGTGTCGGGCGCTACTGCCCGAGATGCTCATGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143816743|143816975 hsa-let-7b-5p 0 0 1
chr8:143816743|143816975 hsa-let-7b-3p 0 0 1
chr8:143816743|143816975 hsa-let-7c-5p 0 0 1
chr8:143816743|143816975 hsa-let-7c-3p 0 0 1
chr8:143816743|143816975 hsa-let-7d-5p 0 0 1
chr8:143816743|143816975 hsa-let-7d-3p 0 0 1
chr8:143816743|143816975 hsa-let-7e-5p 0 0 1
chr8:143816743|143816975 hsa-let-7e-3p 0 0 1
chr8:143816743|143816975 hsa-miR-98-5p 0 0 1
chr8:143816743|143816975 hsa-miR-98-3p 0 0 1
chr8:143816743|143816975 hsa-let-7g-5p 0 0 1
chr8:143816743|143816975 hsa-let-7g-3p 0 0 1
chr8:143816743|143816975 hsa-let-7i-5p 0 0 1
chr8:143816743|143816975 hsa-let-7i-3p 0 0 1
chr8:143816743|143816975 hsa-miR-619-5p 0 0 1
chr8:143816743|143816975 hsa-miR-619-3p 0 0 1
chr8:143816743|143816975 hsa-miR-626 0 0 1
chr8:143816743|143816975 hsa-miR-631 0 0 1
chr8:143816743|143816975 hsa-miR-298 0 0 1
chr8:143816743|143816975 hsa-miR-744-5p 0 0 1
chr8:143816743|143816975 hsa-miR-744-3p 0 0 1
chr8:143816743|143816975 hsa-miR-940 0 0 1
chr8:143816743|143816975 hsa-miR-1291 0 1 1
chr8:143816743|143816975 hsa-miR-1293 0 0 1
chr8:143816743|143816975 hsa-miR-1272 0 0 1
chr8:143816743|143816975 hsa-miR-139-5p 0 0 1
chr8:143816743|143816975 hsa-miR-486-3p 0 0 1
chr8:143816743|143816975 hsa-miR-423-5p 0 1 1
chr8:143816743|143816975 hsa-miR-1207-3p 0 0 1
chr8:143816743|143816975 hsa-miR-1207-5p 1 1 1
chr8:143816743|143816975 hsa-miR-324-3p 0 0 1
chr8:143816743|143816975 hsa-miR-542-3p 0 0 1
chr8:143816743|143816975 hsa-let-7a 0 0 1
chr8:143816743|143816975 hsa-let-7f 0 0 1
chr8:143816743|143816975 hsa-miR-663 0 0 1
chr8:143816743|143816975 hsa-miR-608 1 1 0
chr8:143816743|143816975 hsa-miR-638 1 0 0
chr8:143816743|143816975 hsa-miR-663a 1 1 0
chr8:143816743|143816975 hsa-miR-762 1 0 0
chr8:143816743|143816975 hsa-miR-1268a 1 0 0
chr8:143816743|143816975 hsa-miR-1275 1 0 0
chr8:143816743|143816975 hsa-miR-3141 1 0 0
chr8:143816743|143816975 hsa-miR-3147 1 0 0
chr8:143816743|143816975 hsa-miR-3154 0 1 0
chr8:143816743|143816975 hsa-miR-3196 1 0 0
chr8:143816743|143816975 hsa-miR-4270 1 0 0
chr8:143816743|143816975 hsa-miR-1268b 1 0 0
chr8:143816743|143816975 hsa-miR-4458 0 1 0
chr8:143816743|143816975 hsa-miR-4466 1 0 0
chr8:143816743|143816975 hsa-miR-4479 1 0 0
chr8:143816743|143816975 hsa-miR-4488 1 1 0
chr8:143816743|143816975 hsa-miR-4492 1 0 0
chr8:143816743|143816975 hsa-miR-4651 1 0 0
chr8:143816743|143816975 hsa-miR-4656 1 0 0
chr8:143816743|143816975 hsa-miR-4706 1 0 0
chr8:143816743|143816975 hsa-miR-4739 1 0 0
chr8:143816743|143816975 hsa-miR-5090 1 1 0
chr8:143816743|143816975 hsa-miR-5787 1 0 0
chr8:143816743|143816975 hsa-miR-6086 1 0 0
chr8:143816743|143816975 hsa-miR-6165 1 1 0
chr8:143816743|143816975 hsa-miR-6860 1 0 0
chr8:143816743|143816975 hsa-miR-7150 1 0 0
chr8:143816743|143816975 hsa-miR-8072 1 0 0
chr8:143816743|143816975 hsa-miR-8080 0 1 0
chr8:143816743|143816975 hsa-miR-152-5p 0 1 0
chr8:143816743|143816975 hsa-miR-128-1-5p 1 1 0
chr8:143816743|143816975 hsa-miR-4433a-3p 1 0 0
chr8:143816743|143816975 hsa-miR-218-2-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6825-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6799-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6880-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4695-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4722-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6890-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6806-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6721-5p 1 0 0
chr8:143816743|143816975 hsa-miR-197-5p 1 0 0
chr8:143816743|143816975 hsa-miR-7845-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6787-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6742-5p 1 0 0
chr8:143816743|143816975 hsa-miR-3180-3p 1 1 0
chr8:143816743|143816975 hsa-miR-185-3p 1 0 0
chr8:143816743|143816975 hsa-miR-6732-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6805-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6798-5p 1 0 0
chr8:143816743|143816975 hsa-miR-2467-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6782-5p 1 0 0
chr8:143816743|143816975 hsa-miR-615-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6786-5p 1 0 0
chr8:143816743|143816975 hsa-miR-7109-5p 1 0 0
chr8:143816743|143816975 hsa-miR-3944-3p 1 0 0
chr8:143816743|143816975 hsa-miR-1229-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4640-5p 1 0 0
chr8:143816743|143816975 hsa-miR-885-3p 1 0 0
chr8:143816743|143816975 hsa-miR-1908-5p 1 1 0
chr8:143816743|143816975 hsa-miR-1228-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6771-5p 1 0 0
chr8:143816743|143816975 hsa-miR-92b-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4717-3p 0 1 0
chr8:143816743|143816975 hsa-miR-7854-3p 0 1 0
chr8:143816743|143816975 hsa-miR-7111-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6830-3p 0 1 0
chr8:143816743|143816975 hsa-miR-4787-5p 1 0 0
chr8:143816743|143816975 hsa-miR-149-3p 1 0 0
chr8:143816743|143816975 hsa-miR-6789-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6886-5p 1 0 0
chr8:143816743|143816975 hsa-miR-1236-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6752-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6814-5p 0 1 0
chr8:143816743|143816975 hsa-miR-34a-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6792-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6795-3p 0 1 0
chr8:143816743|143816975 hsa-miR-1296-3p 1 0 0
chr8:143816743|143816975 hsa-miR-3173-5p 0 1 0
chr8:143816743|143816975 hsa-miR-132-3p 0 1 0
chr8:143816743|143816975 hsa-miR-212-3p 0 1 0
chr8:143816743|143816975 hsa-miR-10400-5p 1 0 0
chr8:143816743|143816975 hsa-miR-1233-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4763-3p 1 1 0
chr8:143816743|143816975 hsa-miR-6769b-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6787-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6816-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6865-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6870-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6893-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6775-5p 1 1 0
chr8:143816743|143816975 hsa-miR-1343-5p 1 0 0
chr8:143816743|143816975 hsa-miR-3180 1 1 0
chr8:143816743|143816975 hsa-miR-6737-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6743-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6752-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6756-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6803-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6813-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6819-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6842-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6851-5p 1 1 0
chr8:143816743|143816975 hsa-miR-1249-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6722-3p 1 0 0
chr8:143816743|143816975 hsa-miR-6751-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6763-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6774-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6808-5p 1 1 0
chr8:143816743|143816975 hsa-miR-6879-5p 1 0 0
chr8:143816743|143816975 hsa-miR-7111-5p 1 1 0
chr8:143816743|143816975 hsa-miR-4728-5p 1 0 0
chr8:143816743|143816975 hsa-miR-5196-5p 1 0 0
chr8:143816743|143816975 hsa-miR-642b-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6780b-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6836-5p 1 0 0
chr8:143816743|143816975 hsa-miR-10396a-5p 1 1 0
chr8:143816743|143816975 hsa-miR-10396b-5p 1 1 0
chr8:143816743|143816975 hsa-miR-1237-5p 1 1 0
chr8:143816743|143816975 hsa-miR-1909-3p 1 0 0
chr8:143816743|143816975 hsa-miR-328-5p 1 1 0
chr8:143816743|143816975 hsa-miR-4649-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4745-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6729-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6735-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6738-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6794-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6795-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6846-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6848-5p 1 0 0
chr8:143816743|143816975 hsa-miR-4697-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6831-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6885-5p 1 0 0
chr8:143816743|143816975 hsa-miR-939-5p 1 0 0
chr8:143816743|143816975 hsa-miR-1910-3p 0 1 0
chr8:143816743|143816975 hsa-miR-6511a-5p 0 1 0
chr8:143816743|143816975 hsa-miR-6766-5p 1 0 0
chr8:143816743|143816975 hsa-miR-6775-3p 0 1 0
chr8:143816743|143816975 hsa-miR-3059-5p 0 1 0
chr8:143816743|143816975 hsa-miR-4756-5p 1 0 0
chr8:143816743|143816975 hsa-miR-3619-5p 1 0 0
chr8:143816743|143816975 hsa-miR-642a-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143816743|143816975
ORF Type ORF1
Protein Length 66
Nucleotide Length 198
Protein Sequence MSLGSTMLRRTITVDCGAGPRGRQLSTAAPPPYPLPRHHPAPLPTSCLRSSFCITMCRALLPEMLM
Nucleotide Sequence ATGTCCTTGGGGTCCACCATGTTGCGCAGAACCATCACTGTAGACTGTGGGGCAGGGCCGAGGGGAAGACAGCTGAGCACTGCGGCCCCGCCCCCCTACCCTCTCCCCCGCCACCACCCTGCCCCTCTGCCTACCTCCTGCTTGCGGAGCAGCTTCTGCATCACCATGTGTCGGGCGCTACTGCCCGAGATGCTCATG
CircID chr8:143816743|143816975
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MRPRPPTLSPATTLPLCLPPACGAASASPCVGRYCPRCSC
Nucleotide Sequence CTGCGGCCCCGCCCCCCTACCCTCTCCCCCGCCACCACCCTGCCCCTCTGCCTACCTCCTGCTTGCGGAGCAGCTTCTGCATCACCATGTGTCGGGCGCTACTGCCCGAGATGCTCATGT
CircID chr8:143816743|143816975
ORF Type ORF3
Protein Length 52
Nucleotide Length 156
Protein Sequence MWGRAEGKTAEHCGPAPLPSPPPPPCPSAYLLLAEQLLHHHVSGATARDAHV
Nucleotide Sequence CTGTGGGGCAGGGCCGAGGGGAAGACAGCTGAGCACTGCGGCCCCGCCCCCCTACCCTCTCCCCCGCCACCACCCTGCCCCTCTGCCTACCTCCTGCTTGCGGAGCAGCTTCTGCATCACCATGTGTCGGGCGCTACTGCCCGAGATGCTCATGTG
CircID chr8:143816743|143816975
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MSISGSSARHMVMQKLLRKQEVGRGAGWWRGRG
Nucleotide Sequence ATGAGCATCTCGGGCAGTAGCGCCCGACACATGGTGATGCAGAAGCTGCTCCGCAAGCAGGAGGTAGGCAGAGGGGCAGGGTGGTGGCGGGGGAGAGGGTAG
CircID chr8:143816743|143816975
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MSSPRPCPTVYSDGSAQHGGPQGHR
Nucleotide Sequence CTGTCTTCCCCTCGGCCCTGCCCCACAGTCTACAGTGATGGTTCTGCGCAACATGGTGGACCCCAAGGACATCGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab