CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143817117|143817450
Strand -
CircType exon
Host Gene ENSG00000179950.12;
Algorism CIRI2;
Sequence CGGGATAGGAGGACGGGCTGGGGTCACACCTGTGATGACTCCAGGTGCCTGGGCAGCCATGACAGCCTGGGGCAAAGTGCCCAGGGGCTGGGCCAGGGTCAGTGCTGGGGACACCAGTCCAGGTGTGCCCAGGGTACCCAGCACCGCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143817117|143817450 hsa-miR-10a-5p 0 0 1
chr8:143817117|143817450 hsa-miR-10a-3p 0 0 1
chr8:143817117|143817450 hsa-miR-10b-5p 0 0 1
chr8:143817117|143817450 hsa-miR-10b-3p 0 0 1
chr8:143817117|143817450 hsa-miR-422a 0 0 1
chr8:143817117|143817450 hsa-miR-504-5p 0 0 1
chr8:143817117|143817450 hsa-miR-504-3p 0 0 1
chr8:143817117|143817450 hsa-miR-552-5p 0 0 1
chr8:143817117|143817450 hsa-miR-552-3p 0 0 1
chr8:143817117|143817450 hsa-miR-604 0 0 1
chr8:143817117|143817450 hsa-miR-612 0 1 1
chr8:143817117|143817450 hsa-miR-619-5p 0 0 1
chr8:143817117|143817450 hsa-miR-619-3p 0 0 1
chr8:143817117|143817450 hsa-miR-647 0 0 1
chr8:143817117|143817450 hsa-miR-1228-5p 0 0 1
chr8:143817117|143817450 hsa-miR-1228-3p 0 0 1
chr8:143817117|143817450 hsa-miR-1247-5p 0 0 1
chr8:143817117|143817450 hsa-miR-1247-3p 0 0 1
chr8:143817117|143817450 hsa-miR-1250-5p 0 0 1
chr8:143817117|143817450 hsa-miR-1250-3p 0 0 1
chr8:143817117|143817450 hsa-miR-1288-5p 0 0 1
chr8:143817117|143817450 hsa-miR-1288-3p 0 0 1
chr8:143817117|143817450 hsa-miR-1289 0 0 1
chr8:143817117|143817450 hsa-miR-1225-5p 0 0 1
chr8:143817117|143817450 hsa-miR-331-3p 0 1 1
chr8:143817117|143817450 hsa-miR-513a-5p 0 0 1
chr8:143817117|143817450 hsa-miR-220c 0 0 1
chr8:143817117|143817450 hsa-miR-378 0 0 1
chr8:143817117|143817450 hsa-miR-1269 0 0 1
chr8:143817117|143817450 hsa-miR-1285 0 0 1
chr8:143817117|143817450 hsa-miR-608 1 0 0
chr8:143817117|143817450 hsa-miR-661 0 1 0
chr8:143817117|143817450 hsa-miR-762 1 0 0
chr8:143817117|143817450 hsa-miR-764 1 0 0
chr8:143817117|143817450 hsa-miR-1263 0 1 0
chr8:143817117|143817450 hsa-miR-378c 0 1 0
chr8:143817117|143817450 hsa-miR-4292 0 1 0
chr8:143817117|143817450 hsa-miR-3657 0 1 0
chr8:143817117|143817450 hsa-miR-378e 0 1 0
chr8:143817117|143817450 hsa-miR-378h 0 1 0
chr8:143817117|143817450 hsa-miR-4515 1 1 0
chr8:143817117|143817450 hsa-miR-378i 0 1 0
chr8:143817117|143817450 hsa-miR-6860 0 1 0
chr8:143817117|143817450 hsa-miR-7978 0 1 0
chr8:143817117|143817450 hsa-miR-215-3p 0 1 0
chr8:143817117|143817450 hsa-miR-6861-5p 0 1 0
chr8:143817117|143817450 hsa-miR-5589-5p 0 1 0
chr8:143817117|143817450 hsa-miR-101-5p 0 1 0
chr8:143817117|143817450 hsa-miR-6849-3p 0 1 0
chr8:143817117|143817450 hsa-miR-4725-5p 0 1 0
chr8:143817117|143817450 hsa-miR-6765-3p 1 1 0
chr8:143817117|143817450 hsa-miR-939-3p 1 1 0
chr8:143817117|143817450 hsa-miR-889-5p 0 1 0
chr8:143817117|143817450 hsa-miR-3677-3p 1 0 0
chr8:143817117|143817450 hsa-miR-361-3p 0 1 0
chr8:143817117|143817450 hsa-miR-383-3p 0 1 0
chr8:143817117|143817450 hsa-miR-4750-3p 0 1 0
chr8:143817117|143817450 hsa-miR-6846-3p 1 0 0
chr8:143817117|143817450 hsa-miR-6808-3p 0 1 0
chr8:143817117|143817450 hsa-miR-5189-5p 0 1 0
chr8:143817117|143817450 hsa-miR-3187-5p 0 1 0
chr8:143817117|143817450 hsa-miR-1285-3p 0 1 0
chr8:143817117|143817450 hsa-miR-378a-3p 0 1 0
chr8:143817117|143817450 hsa-miR-6791-5p 0 1 0
chr8:143817117|143817450 hsa-miR-330-5p 0 1 0
chr8:143817117|143817450 hsa-miR-378d 0 1 0
chr8:143817117|143817450 hsa-miR-7973 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143817117|143817450
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MGSHDSLGQSAQGLGQGQCWGHQSRCAQGTQHR
Nucleotide Sequence CTGGGCAGCCATGACAGCCTGGGGCAAAGTGCCCAGGGGCTGGGCCAGGGTCAGTGCTGGGGACACCAGTCCAGGTGTGCCCAGGGTACCCAGCACCGC

CircID chr8:143817117|143817450
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MTPGAWAAMTAWGKVPRGWARVSAGDTSPGVPRVPSTA
Nucleotide Sequence ATGACTCCAGGTGCCTGGGCAGCCATGACAGCCTGGGGCAAAGTGCCCAGGGGCTGGGCCAGGGTCAGTGCTGGGGACACCAGTCCAGGTGTGCCCAGGGTACCCAGCACCGCT

CircID chr8:143817117|143817450
ORF Type ORF3
Protein Length 47
Nucleotide Length 141
Protein Sequence MGTLGTPGLVSPALTLAQPLGTLPQAVMAAQAPGVITGVTPARPPIP
Nucleotide Sequence CTGGGTACCCTGGGCACACCTGGACTGGTGTCCCCAGCACTGACCCTGGCCCAGCCCCTGGGCACTTTGCCCCAGGCTGTCATGGCTGCCCAGGCACCTGGAGTCATCACAGGTGTGACCCCAGCCCGTCCTCCTATCCCG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites