CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143821653|143821913
Strand -
CircType exon
Host Gene ENSG00000179950.12;
Algorism CIRI2;
Sequence TCTTGATGCTCTGCTCCATGGCGTACTTCTTGGCCTTCTGAAGGGCCTCCTGCTGCTCGGGCGTCAGGGGAGGCAGCCCCAGCTTGGCGGCTGTGCTCTGCCCGTTCTCCATCTTGATGGAGTCTGTGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143821653|143821913 hsa-miR-15a-5p 0 0 1
chr8:143821653|143821913 hsa-miR-15a-3p 0 0 1
chr8:143821653|143821913 hsa-miR-214-5p 0 0 1
chr8:143821653|143821913 hsa-miR-214-3p 0 0 1
chr8:143821653|143821913 hsa-miR-15b-5p 0 0 1
chr8:143821653|143821913 hsa-miR-15b-3p 0 0 1
chr8:143821653|143821913 hsa-miR-195-5p 0 0 1
chr8:143821653|143821913 hsa-miR-195-3p 0 0 1
chr8:143821653|143821913 hsa-miR-424-5p 0 0 1
chr8:143821653|143821913 hsa-miR-424-3p 0 0 1
chr8:143821653|143821913 hsa-miR-497-5p 0 0 1
chr8:143821653|143821913 hsa-miR-497-3p 0 0 1
chr8:143821653|143821913 hsa-miR-331-3p 0 0 1
chr8:143821653|143821913 hsa-miR-16 0 0 1
chr8:143821653|143821913 hsa-miR-4534 0 1 0
chr8:143821653|143821913 hsa-miR-4647 0 1 0
chr8:143821653|143821913 hsa-miR-6081 0 1 0
chr8:143821653|143821913 hsa-miR-6165 0 1 0
chr8:143821653|143821913 hsa-miR-4665-3p 1 0 0
chr8:143821653|143821913 hsa-miR-6836-3p 0 1 0
chr8:143821653|143821913 hsa-miR-671-5p 1 0 0
chr8:143821653|143821913 hsa-miR-6089 1 0 0
chr8:143821653|143821913 hsa-miR-4722-5p 0 1 0
chr8:143821653|143821913 hsa-miR-6762-3p 0 1 0
chr8:143821653|143821913 hsa-miR-1292-5p 0 1 0
chr8:143821653|143821913 hsa-miR-185-3p 0 1 0
chr8:143821653|143821913 hsa-miR-5008-5p 1 1 0
chr8:143821653|143821913 hsa-miR-6882-3p 1 1 0
chr8:143821653|143821913 hsa-miR-1908-3p 1 0 0
chr8:143821653|143821913 hsa-miR-7112-5p 1 1 0
chr8:143821653|143821913 hsa-miR-6778-3p 0 1 0
chr8:143821653|143821913 hsa-miR-6746-3p 0 1 0
chr8:143821653|143821913 hsa-miR-2277-5p 1 0 0
chr8:143821653|143821913 hsa-miR-4763-3p 1 0 0
chr8:143821653|143821913 hsa-miR-6722-3p 1 0 0
chr8:143821653|143821913 hsa-miR-7843-5p 1 1 0
chr8:143821653|143821913 hsa-miR-3619-5p 0 1 0
chr8:143821653|143821913 hsa-miR-520e-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143821653|143821913
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MLHGVLLGLLKGLLLLGRQGRQPQLGGCALPVLHLDGVCA
Nucleotide Sequence CTGCTCCATGGCGTACTTCTTGGCCTTCTGAAGGGCCTCCTGCTGCTCGGGCGTCAGGGGAGGCAGCCCCAGCTTGGCGGCTGTGCTCTGCCCGTTCTCCATCTTGATGGAGTCTGTGCC

CircID chr8:143821653|143821913
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MENGQSTAAKLGLPPLTPEQQEALQKAKKYAMEQSIK
Nucleotide Sequence ATGGAGAACGGGCAGAGCACAGCCGCCAAGCTGGGGCTGCCTCCCCTGACGCCCGAGCAGCAGGAGGCCCTTCAGAAGGCCAAGAAGTACGCCATGGAGCAGAGCATCAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites