CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143926977|143927299
Strand -
CircType exon
Host Gene ENSG00000178209.13;
Algorism CIRI2;
Sequence CTCCTGGATGACACTCTCTGATCCCGACTGGACCTTGGGCTTCTTGGCCGGGGAGGCCACCGGCTCAAGCTGCGCCTTGTACGTCACCAGCTGGAGTTCATAGTCCTGTGGCAATGCACTGCGGTCAGCCACCAGCTCTGCCCTCCGATGGCCCCTGCCCAGCCCCTAAACCCTCACATGGGCTTTCCCTGGCATGGCCCAGGCTCAGGGAAAGCCCGCCATCATCCTGGCAACGGTCCCGGACTTGGGGCCTGGTGCAGGCGGCTGGGCCTCACCTTGATGGCGTTGATGTACTGTTTCGCAAACCTCTGGCACTCCTCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143926977|143927299 hsa-miR-33a-5p 0 0 1
chr8:143926977|143927299 hsa-miR-33a-3p 0 0 1
chr8:143926977|143927299 hsa-miR-148a-5p 0 0 1
chr8:143926977|143927299 hsa-miR-148a-3p 0 0 1
chr8:143926977|143927299 hsa-miR-152-5p 0 0 1
chr8:143926977|143927299 hsa-miR-152-3p 0 0 1
chr8:143926977|143927299 hsa-miR-383-5p 0 0 1
chr8:143926977|143927299 hsa-miR-383-3p 0 0 1
chr8:143926977|143927299 hsa-miR-148b-5p 0 0 1
chr8:143926977|143927299 hsa-miR-148b-3p 0 0 1
chr8:143926977|143927299 hsa-miR-611 1 0 1
chr8:143926977|143927299 hsa-miR-612 1 1 1
chr8:143926977|143927299 hsa-miR-624-5p 0 0 1
chr8:143926977|143927299 hsa-miR-624-3p 0 0 1
chr8:143926977|143927299 hsa-miR-629-5p 0 0 1
chr8:143926977|143927299 hsa-miR-629-3p 0 0 1
chr8:143926977|143927299 hsa-miR-33b-5p 0 0 1
chr8:143926977|143927299 hsa-miR-33b-3p 0 0 1
chr8:143926977|143927299 hsa-miR-661 0 0 1
chr8:143926977|143927299 hsa-miR-766-5p 0 0 1
chr8:143926977|143927299 hsa-miR-766-3p 0 0 1
chr8:143926977|143927299 hsa-miR-665 0 0 1
chr8:143926977|143927299 hsa-miR-1202 0 0 1
chr8:143926977|143927299 hsa-miR-1294 1 0 1
chr8:143926977|143927299 hsa-miR-767-5p 0 0 1
chr8:143926977|143927299 hsa-miR-508-5p 0 0 1
chr8:143926977|143927299 hsa-miR-1207-3p 0 0 1
chr8:143926977|143927299 hsa-miR-1207-5p 1 1 1
chr8:143926977|143927299 hsa-miR-125a-5p 0 0 1
chr8:143926977|143927299 hsa-miR-524-3p 0 0 1
chr8:143926977|143927299 hsa-miR-525-3p 0 0 1
chr8:143926977|143927299 hsa-miR-151-5p 0 0 1
chr8:143926977|143927299 hsa-miR-1274a 0 0 1
chr8:143926977|143927299 hsa-miR-125b 0 0 1
chr8:143926977|143927299 hsa-miR-138 0 0 1
chr8:143926977|143927299 hsa-miR-1285 0 0 1
chr8:143926977|143927299 hsa-miR-450a 0 0 1
chr8:143926977|143927299 hsa-miR-663 0 0 1
chr8:143926977|143927299 hsa-miR-499-3p 0 0 1
chr8:143926977|143927299 hsa-miR-101 0 0 1
chr8:143926977|143927299 hsa-miR-638 1 1 0
chr8:143926977|143927299 hsa-miR-663a 1 0 0
chr8:143926977|143927299 hsa-miR-658 1 0 0
chr8:143926977|143927299 hsa-miR-762 1 1 0
chr8:143926977|143927299 hsa-miR-663b 1 0 0
chr8:143926977|143927299 hsa-miR-3141 1 0 0
chr8:143926977|143927299 hsa-miR-3147 1 0 0
chr8:143926977|143927299 hsa-miR-3153 0 1 0
chr8:143926977|143927299 hsa-miR-3197 1 0 0
chr8:143926977|143927299 hsa-miR-4299 0 1 0
chr8:143926977|143927299 hsa-miR-4316 0 1 0
chr8:143926977|143927299 hsa-miR-4317 0 1 0
chr8:143926977|143927299 hsa-miR-3659 0 1 0
chr8:143926977|143927299 hsa-miR-4456 0 1 0
chr8:143926977|143927299 hsa-miR-4492 1 1 0
chr8:143926977|143927299 hsa-miR-4497 0 1 0
chr8:143926977|143927299 hsa-miR-4498 1 1 0
chr8:143926977|143927299 hsa-miR-4505 1 1 0
chr8:143926977|143927299 hsa-miR-4507 1 0 0
chr8:143926977|143927299 hsa-miR-4508 1 0 0
chr8:143926977|143927299 hsa-miR-1587 1 0 0
chr8:143926977|143927299 hsa-miR-4706 1 0 0
chr8:143926977|143927299 hsa-miR-4710 1 0 0
chr8:143926977|143927299 hsa-miR-4741 1 0 0
chr8:143926977|143927299 hsa-miR-4748 0 1 0
chr8:143926977|143927299 hsa-miR-5192 0 1 0
chr8:143926977|143927299 hsa-miR-5194 1 0 0
chr8:143926977|143927299 hsa-miR-5698 1 0 0
chr8:143926977|143927299 hsa-miR-5787 1 0 0
chr8:143926977|143927299 hsa-miR-6085 1 1 0
chr8:143926977|143927299 hsa-miR-6086 1 0 0
chr8:143926977|143927299 hsa-miR-6125 1 0 0
chr8:143926977|143927299 hsa-miR-6132 1 0 0
chr8:143926977|143927299 hsa-miR-6860 1 1 0
chr8:143926977|143927299 hsa-miR-12119 1 0 0
chr8:143926977|143927299 hsa-miR-12128 0 1 0
chr8:143926977|143927299 hsa-miR-138-5p 1 1 0
chr8:143926977|143927299 hsa-miR-370-3p 1 0 0
chr8:143926977|143927299 hsa-miR-4433b-3p 1 0 0
chr8:143926977|143927299 hsa-miR-6734-5p 1 0 0
chr8:143926977|143927299 hsa-miR-504-3p 1 1 0
chr8:143926977|143927299 hsa-miR-4700-3p 0 1 0
chr8:143926977|143927299 hsa-miR-4433a-3p 1 0 0
chr8:143926977|143927299 hsa-miR-671-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6861-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6857-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6720-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6089 1 0 0
chr8:143926977|143927299 hsa-miR-6820-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6741-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6842-3p 1 0 0
chr8:143926977|143927299 hsa-miR-6721-5p 1 1 0
chr8:143926977|143927299 hsa-miR-197-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4711-5p 0 1 0
chr8:143926977|143927299 hsa-miR-6796-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6732-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6798-5p 1 0 0
chr8:143926977|143927299 hsa-miR-3130-3p 0 1 0
chr8:143926977|143927299 hsa-miR-6782-5p 1 0 0
chr8:143926977|143927299 hsa-miR-3150b-3p 1 0 0
chr8:143926977|143927299 hsa-miR-7855-5p 1 0 0
chr8:143926977|143927299 hsa-miR-5006-5p 1 1 0
chr8:143926977|143927299 hsa-miR-3691-3p 0 1 0
chr8:143926977|143927299 hsa-miR-1226-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6763-3p 0 1 0
chr8:143926977|143927299 hsa-miR-1909-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4693-3p 0 1 0
chr8:143926977|143927299 hsa-miR-1229-5p 1 1 0
chr8:143926977|143927299 hsa-miR-1908-3p 0 1 0
chr8:143926977|143927299 hsa-miR-193b-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4640-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1228-5p 1 0 0
chr8:143926977|143927299 hsa-miR-296-3p 1 0 0
chr8:143926977|143927299 hsa-miR-6501-5p 0 1 0
chr8:143926977|143927299 hsa-miR-4733-3p 0 1 0
chr8:143926977|143927299 hsa-miR-6824-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6789-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6781-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1225-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4750-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6746-3p 0 1 0
chr8:143926977|143927299 hsa-miR-371a-3p 1 0 0
chr8:143926977|143927299 hsa-miR-6508-3p 0 1 0
chr8:143926977|143927299 hsa-miR-7113-5p 0 1 0
chr8:143926977|143927299 hsa-miR-4485-5p 0 1 0
chr8:143926977|143927299 hsa-miR-1251-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1233-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4763-3p 1 1 0
chr8:143926977|143927299 hsa-miR-6787-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6816-5p 1 0 0
chr8:143926977|143927299 hsa-miR-5001-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6726-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6743-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6752-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6756-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6803-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6813-5p 1 1 0
chr8:143926977|143927299 hsa-miR-7110-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1249-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6722-3p 1 1 0
chr8:143926977|143927299 hsa-miR-6751-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6779-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6780a-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6797-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6808-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6879-5p 1 1 0
chr8:143926977|143927299 hsa-miR-3620-5p 1 0 0
chr8:143926977|143927299 hsa-miR-5189-5p 1 1 0
chr8:143926977|143927299 hsa-miR-5196-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6836-5p 1 0 0
chr8:143926977|143927299 hsa-miR-10396b-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1909-3p 1 1 0
chr8:143926977|143927299 hsa-miR-328-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4632-5p 1 1 0
chr8:143926977|143927299 hsa-miR-4685-5p 1 0 0
chr8:143926977|143927299 hsa-miR-4726-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6729-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6735-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6738-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6777-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6846-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6848-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6858-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6889-5p 1 0 0
chr8:143926977|143927299 hsa-miR-3187-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6845-5p 0 1 0
chr8:143926977|143927299 hsa-miR-6885-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6511a-5p 0 1 0
chr8:143926977|143927299 hsa-miR-3085-5p 1 0 0
chr8:143926977|143927299 hsa-miR-3940-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6731-5p 1 0 0
chr8:143926977|143927299 hsa-miR-1199-5p 0 1 0
chr8:143926977|143927299 hsa-miR-7843-5p 1 1 0
chr8:143926977|143927299 hsa-miR-6855-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6785-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6791-5p 0 1 0
chr8:143926977|143927299 hsa-miR-550a-5p 1 0 0
chr8:143926977|143927299 hsa-miR-6762-5p 1 1 0
chr8:143926977|143927299 hsa-miR-3928-5p 0 1 0
chr8:143926977|143927299 hsa-miR-6764-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143926977|143927299
ORF Type ORF1
Protein Length 98
Nucleotide Length 294
Protein Sequence MDLGLLGRGGHRLKLRLVRHQLEFIVLWQCTAVSHQLCPPMAPAQPLNPHMGFPWHGPGSGKARHHPGNGPGLGAWCRRLGLTLMALMYCFANLWHSS
Nucleotide Sequence CTGGACCTTGGGCTTCTTGGCCGGGGAGGCCACCGGCTCAAGCTGCGCCTTGTACGTCACCAGCTGGAGTTCATAGTCCTGTGGCAATGCACTGCGGTCAGCCACCAGCTCTGCCCTCCGATGGCCCCTGCCCAGCCCCTAAACCCTCACATGGGCTTTCCCTGGCATGGCCCAGGCTCAGGGAAAGCCCGCCATCATCCTGGCAACGGTCCCGGACTTGGGGCCTGGTGCAGGCGGCTGGGCCTCACCTTGATGGCGTTGATGTACTGTTTCGCAAACCTCTGGCACTCCTCG
CircID chr8:143926977|143927299
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MTLSDPDWTLGFLAGEATGSSCALYVTSWSS
Nucleotide Sequence ATGACACTCTCTGATCCCGACTGGACCTTGGGCTTCTTGGCCGGGGAGGCCACCGGCTCAAGCTGCGCCTTGTACGTCACCAGCTGGAGTTCATAG
CircID chr8:143926977|143927299
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MAQAQGKPAIILATVPDLGPGAGGWASP
Nucleotide Sequence ATGGCCCAGGCTCAGGGAAAGCCCGCCATCATCCTGGCAACGGTCCCGGACTTGGGGCCTGGTGCAGGCGGCTGGGCCTCACCTTGA
CircID chr8:143926977|143927299
ORF Type ORF4
Protein Length 102
Nucleotide Length 306
Protein Sequence MIPTGPWASWPGRPPAQAAPCTSPAGVHSPVAMHCGQPPALPSDGPCPAPKPSHGLSLAWPRLRESPPSSWQRSRTWGLVQAAGPHLDGVDVLFRKPLALLD
Nucleotide Sequence CTGATCCCGACTGGACCTTGGGCTTCTTGGCCGGGGAGGCCACCGGCTCAAGCTGCGCCTTGTACGTCACCAGCTGGAGTTCATAGTCCTGTGGCAATGCACTGCGGTCAGCCACCAGCTCTGCCCTCCGATGGCCCCTGCCCAGCCCCTAAACCCTCACATGGGCTTTCCCTGGCATGGCCCAGGCTCAGGGAAAGCCCGCCATCATCCTGGCAACGGTCCCGGACTTGGGGCCTGGTGCAGGCGGCTGGGCCTCACCTTGATGGCGTTGATGTACTGTTTCGCAAACCTCTGGCACTCCTCGAC
CircID chr8:143926977|143927299
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MSLGHARESPCEGLGAGQGPSEGRAGG
Nucleotide Sequence CTGAGCCTGGGCCATGCCAGGGAAAGCCCATGTGAGGGTTTAGGGGCTGGGCAGGGGCCATCGGAGGGCAGAGCTGGTGGCTGA
CircID chr8:143926977|143927299
ORF Type ORF6
Protein Length 54
Nucleotide Length 162
Protein Sequence MGRGHRRAELVADRSALPQDYELQLVTYKAQLEPVASPAKKPKVQSGSESVIQE
Nucleotide Sequence CTGGGCAGGGGCCATCGGAGGGCAGAGCTGGTGGCTGACCGCAGTGCATTGCCACAGGACTATGAACTCCAGCTGGTGACGTACAAGGCGCAGCTTGAGCCGGTGGCCTCCCCGGCCAAGAAGCCCAAGGTCCAGTCGGGATCAGAGAGTGTCATCCAGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab