CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143932190|143932499
Strand +
CircType exon
Host Gene ENSG00000178209.13;
Algorism CIRI2;
Sequence TAAGGAGCTAATGTGGCTGAATGAGAAGGAGGAGGAGGAGGTGGGCTTCGACTGGAGCGACCGCAACACCAACATGACCGCCAAGAAGGAGAGCTACTCGGTGAGCGGTGGCCCAGCTGCCCTGAACCCCACAGCCCCCTCCCCAGCTGTGCCCTGGCCGTCCCCTATGGTCAGAGACCAGTGGGGGCCCTGGGTCGAGTTTGCTGGGAGCGTGGCAGAGCCGGGTGTGGCCGGCCGTCCCTGAGACCCTTTGCTCTGGTGCCAGGCGCTGATGCGGGAGCTGGAGCTGAAGGAGAAGAAGATCAAGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143932190|143932499 hsa-miR-205-5p 0 0 1
chr8:143932190|143932499 hsa-miR-205-3p 0 0 1
chr8:143932190|143932499 hsa-miR-545-5p 0 0 1
chr8:143932190|143932499 hsa-miR-545-3p 0 0 1
chr8:143932190|143932499 hsa-miR-551a 0 0 1
chr8:143932190|143932499 hsa-miR-551b-5p 0 0 1
chr8:143932190|143932499 hsa-miR-551b-3p 0 0 1
chr8:143932190|143932499 hsa-miR-591 0 0 1
chr8:143932190|143932499 hsa-miR-593-5p 0 0 1
chr8:143932190|143932499 hsa-miR-593-3p 0 0 1
chr8:143932190|143932499 hsa-miR-766-5p 0 0 1
chr8:143932190|143932499 hsa-miR-766-3p 0 0 1
chr8:143932190|143932499 hsa-miR-760 0 0 1
chr8:143932190|143932499 hsa-miR-939-5p 0 0 1
chr8:143932190|143932499 hsa-miR-939-3p 0 0 1
chr8:143932190|143932499 hsa-miR-942-5p 0 0 1
chr8:143932190|143932499 hsa-miR-942-3p 0 0 1
chr8:143932190|143932499 hsa-miR-1182 0 0 1
chr8:143932190|143932499 hsa-miR-1237-5p 0 0 1
chr8:143932190|143932499 hsa-miR-1237-3p 0 0 1
chr8:143932190|143932499 hsa-miR-1248 0 0 1
chr8:143932190|143932499 hsa-miR-1266-5p 0 0 1
chr8:143932190|143932499 hsa-miR-1266-3p 0 0 1
chr8:143932190|143932499 hsa-miR-296-5p 0 0 1
chr8:143932190|143932499 hsa-miR-491-5p 0 0 1
chr8:143932190|143932499 hsa-miR-941 0 0 1
chr8:143932190|143932499 hsa-miR-1224-3p 1 0 1
chr8:143932190|143932499 hsa-miR-1207-3p 0 0 1
chr8:143932190|143932499 hsa-miR-608 1 0 0
chr8:143932190|143932499 hsa-miR-638 1 0 0
chr8:143932190|143932499 hsa-miR-663a 1 0 0
chr8:143932190|143932499 hsa-miR-762 1 0 0
chr8:143932190|143932499 hsa-miR-920 1 0 0
chr8:143932190|143932499 hsa-miR-1260a 1 0 0
chr8:143932190|143932499 hsa-miR-1281 1 0 0
chr8:143932190|143932499 hsa-miR-3196 1 0 0
chr8:143932190|143932499 hsa-miR-4258 1 0 0
chr8:143932190|143932499 hsa-miR-4268 1 0 0
chr8:143932190|143932499 hsa-miR-4290 1 0 0
chr8:143932190|143932499 hsa-miR-3945 1 0 0
chr8:143932190|143932499 hsa-miR-4498 1 0 0
chr8:143932190|143932499 hsa-miR-4525 1 0 0
chr8:143932190|143932499 hsa-miR-4656 1 0 0
chr8:143932190|143932499 hsa-miR-4741 1 0 0
chr8:143932190|143932499 hsa-miR-5193 1 0 0
chr8:143932190|143932499 hsa-miR-5787 1 0 0
chr8:143932190|143932499 hsa-miR-6085 1 0 0
chr8:143932190|143932499 hsa-miR-8089 1 0 0
chr8:143932190|143932499 hsa-miR-197-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6749-3p 1 0 0
chr8:143932190|143932499 hsa-miR-3194-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4665-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6825-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6881-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6728-5p 1 0 0
chr8:143932190|143932499 hsa-miR-197-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6845-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6796-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6796-5p 1 0 0
chr8:143932190|143932499 hsa-miR-877-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6732-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6805-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6728-3p 1 0 0
chr8:143932190|143932499 hsa-miR-5006-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6858-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6884-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4707-3p 1 0 0
chr8:143932190|143932499 hsa-miR-1908-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6784-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4640-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6753-5p 1 0 0
chr8:143932190|143932499 hsa-miR-92b-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4783-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4667-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6736-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6824-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6789-5p 1 0 0
chr8:143932190|143932499 hsa-miR-1306-5p 1 0 0
chr8:143932190|143932499 hsa-miR-7843-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6769a-3p 1 0 0
chr8:143932190|143932499 hsa-miR-3190-5p 1 0 0
chr8:143932190|143932499 hsa-miR-3191-3p 1 0 0
chr8:143932190|143932499 hsa-miR-1236-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4687-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4758-3p 1 0 0
chr8:143932190|143932499 hsa-miR-744-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6758-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6865-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6886-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4433a-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6750-3p 1 0 0
chr8:143932190|143932499 hsa-miR-3156-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4763-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6787-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6775-5p 1 0 0
chr8:143932190|143932499 hsa-miR-5001-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6726-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6752-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6756-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6803-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6813-5p 1 0 0
chr8:143932190|143932499 hsa-miR-7110-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6763-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6779-5p 1 0 0
chr8:143932190|143932499 hsa-miR-320a-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4728-5p 1 0 0
chr8:143932190|143932499 hsa-miR-5196-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6780b-5p 1 0 0
chr8:143932190|143932499 hsa-miR-10396a-5p 1 0 0
chr8:143932190|143932499 hsa-miR-328-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4685-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6794-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6846-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6848-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6858-5p 1 0 0
chr8:143932190|143932499 hsa-miR-4697-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6885-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6855-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6791-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4646-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6750-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6756-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6792-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6805-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6829-3p 1 0 0
chr8:143932190|143932499 hsa-miR-6837-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6511b-3p 1 0 0
chr8:143932190|143932499 hsa-miR-7114-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4691-5p 1 0 0
chr8:143932190|143932499 hsa-miR-6781-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4769-3p 1 0 0
chr8:143932190|143932499 hsa-miR-4724-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr8:143932190|143932499
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MERPQHQHDRQEGELLGERWPSCPEPHSPLPSCALAVPYGQRPVGALGRVCWERGRAGCGRPSLRPFALVPGADAGAGAEGEEDQG
Nucleotide Sequence CTGGAGCGACCGCAACACCAACATGACCGCCAAGAAGGAGAGCTACTCGGTGAGCGGTGGCCCAGCTGCCCTGAACCCCACAGCCCCCTCCCCAGCTGTGCCCTGGCCGTCCCCTATGGTCAGAGACCAGTGGGGGCCCTGGGTCGAGTTTGCTGGGAGCGTGGCAGAGCCGGGTGTGGCCGGCCGTCCCTGAGACCCTTTGCTCTGGTGCCAGGCGCTGATGCGGGAGCTGGAGCTGAAGGAGAAGAAGATCAAGGA
CircID chr8:143932190|143932499
ORF Type ORF2
Protein Length 77
Nucleotide Length 234
Protein Sequence MWLNEKEEEEVGFDWSDRNTNMTAKKESYSVSGGPAALNPTAPSPAVPWPSPMVRDQWGPWVEFAGSVAEPGVAGRP
Nucleotide Sequence ATGTGGCTGAATGAGAAGGAGGAGGAGGAGGTGGGCTTCGACTGGAGCGACCGCAACACCAACATGACCGCCAAGAAGGAGAGCTACTCGGTGAGCGGTGGCCCAGCTGCCCTGAACCCCACAGCCCCCTCCCCAGCTGTGCCCTGGCCGTCCCCTATGGTCAGAGACCAGTGGGGGCCCTGGGTCGAGTTTGCTGGGAGCGTGGCAGAGCCGGGTGTGGCCGGCCGTCCCTGA
CircID chr8:143932190|143932499
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MCPGRPLWSETSGGPGSSLLGAWQSRVWPAVPETLCSGARR
Nucleotide Sequence CTGTGCCCTGGCCGTCCCCTATGGTCAGAGACCAGTGGGGGCCCTGGGTCGAGTTTGCTGGGAGCGTGGCAGAGCCGGGTGTGGCCGGCCGTCCCTGAGACCCTTTGCTCTGGTGCCAGGCGCTGA
CircID chr8:143932190|143932499
ORF Type ORF4
Protein Length 85
Nucleotide Length 258
Protein Sequence MAPEQRVSGTAGHTRLCHAPSKLDPGPPLVSDHRGRPGHSWGGGCGVQGSWATAHRVALLLGGHVGVAVAPVEAHLLLLLLIQPH
Nucleotide Sequence CTGGCACCAGAGCAAAGGGTCTCAGGGACGGCCGGCCACACCCGGCTCTGCCACGCTCCCAGCAAACTCGACCCAGGGCCCCCACTGGTCTCTGACCATAGGGGACGGCCAGGGCACAGCTGGGGAGGGGGCTGTGGGGTTCAGGGCAGCTGGGCCACCGCTCACCGAGTAGCTCTCCTTCTTGGCGGTCATGTTGGTGTTGCGGTCGCTCCAGTCGAAGCCCACCTCCTCCTCCTCCTTCTCATTCAGCCACATTAG
CircID chr8:143932190|143932499
ORF Type ORF5
Protein Length 70
Nucleotide Length 213
Protein Sequence MIFFSFSSSSRISAWHQSKGSQGRPATPGSATLPANSTQGPHWSLTIGDGQGTAGEGAVGFRAAGPPLTE
Nucleotide Sequence TTGATCTTCTTCTCCTTCAGCTCCAGCTCCCGCATCAGCGCCTGGCACCAGAGCAAAGGGTCTCAGGGACGGCCGGCCACACCCGGCTCTGCCACGCTCCCAGCAAACTCGACCCAGGGCCCCCACTGGTCTCTGACCATAGGGGACGGCCAGGGCACAGCTGGGGAGGGGGCTGTGGGGTTCAGGGCAGCTGGGCCACCGCTCACCGAGTAG
CircID chr8:143932190|143932499
ORF Type ORF6
Protein Length 28
Nucleotide Length 84
Protein Sequence MAVMLVLRSLQSKPTSSSSFSFSHISSL
Nucleotide Sequence TTGGCGGTCATGTTGGTGTTGCGGTCGCTCCAGTCGAAGCCCACCTCCTCCTCCTCCTTCTCATTCAGCCACATTAGCTCCTTA
CircID chr8:143932190|143932499
ORF Type ORF7
Protein Length 48
Nucleotide Length 144
Protein Sequence MGRGLWGSGQLGHRSPSSSPSWRSCWCCGRSSRSPPPPPPSHSATLAP
Nucleotide Sequence CTGGGGAGGGGGCTGTGGGGTTCAGGGCAGCTGGGCCACCGCTCACCGAGTAGCTCTCCTTCTTGGCGGTCATGTTGGTGTTGCGGTCGCTCCAGTCGAAGCCCACCTCCTCCTCCTCCTTCTCATTCAGCCACATTAGCTCCT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab