CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143983646|143984023
Strand -
CircType exon
Host Gene ENSG00000178685.12;
Algorism CIRI2;
Sequence CTGGGTGCCACAGTGCTGGGGGCCACAGGCTCCTCCTCCTCATGCCCTGGGGTCACCTCCTCCTCTGGCTGCTCCTGAGGCCCTTCCTCCTCCAGCTCCCGAGGCAGCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTGGCCAGCAGTTCTCGGACCTCCTCCAGGCTCACGTCCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143983646|143984023 hsa-miR-146a-5p 0 0 1
chr8:143983646|143984023 hsa-miR-146a-3p 0 0 1
chr8:143983646|143984023 hsa-miR-588 0 1 1
chr8:143983646|143984023 hsa-miR-604 0 0 1
chr8:143983646|143984023 hsa-miR-647 0 0 1
chr8:143983646|143984023 hsa-miR-765 0 1 1
chr8:143983646|143984023 hsa-miR-892b 0 1 1
chr8:143983646|143984023 hsa-miR-920 1 1 1
chr8:143983646|143984023 hsa-miR-663b 0 0 1
chr8:143983646|143984023 hsa-miR-361-3p 0 0 1
chr8:143983646|143984023 hsa-miR-483-5p 1 1 1
chr8:143983646|143984023 hsa-miR-146b-5p 0 0 1
chr8:143983646|143984023 hsa-miR-1254 0 0 1
chr8:143983646|143984023 hsa-miR-637 1 0 0
chr8:143983646|143984023 hsa-miR-661 1 0 0
chr8:143983646|143984023 hsa-miR-663a 1 0 0
chr8:143983646|143984023 hsa-miR-762 1 0 0
chr8:143983646|143984023 hsa-miR-665 1 0 0
chr8:143983646|143984023 hsa-miR-1182 1 0 0
chr8:143983646|143984023 hsa-miR-1268a 1 0 0
chr8:143983646|143984023 hsa-miR-2861 1 0 0
chr8:143983646|143984023 hsa-miR-3131 1 0 0
chr8:143983646|143984023 hsa-miR-3141 1 0 0
chr8:143983646|143984023 hsa-miR-3154 1 0 0
chr8:143983646|143984023 hsa-miR-3169 0 1 0
chr8:143983646|143984023 hsa-miR-4300 0 1 0
chr8:143983646|143984023 hsa-miR-4308 0 1 0
chr8:143983646|143984023 hsa-miR-4253 1 1 0
chr8:143983646|143984023 hsa-miR-4254 0 1 0
chr8:143983646|143984023 hsa-miR-3652 1 0 0
chr8:143983646|143984023 hsa-miR-3661 1 0 0
chr8:143983646|143984023 hsa-miR-3684 0 1 0
chr8:143983646|143984023 hsa-miR-3945 1 0 0
chr8:143983646|143984023 hsa-miR-1268b 1 1 0
chr8:143983646|143984023 hsa-miR-4440 1 0 0
chr8:143983646|143984023 hsa-miR-4449 1 0 0
chr8:143983646|143984023 hsa-miR-3135b 1 1 0
chr8:143983646|143984023 hsa-miR-4476 0 1 0
chr8:143983646|143984023 hsa-miR-4487 1 1 0
chr8:143983646|143984023 hsa-miR-4498 1 0 0
chr8:143983646|143984023 hsa-miR-4512 0 1 0
chr8:143983646|143984023 hsa-miR-4515 1 1 0
chr8:143983646|143984023 hsa-miR-4525 1 0 0
chr8:143983646|143984023 hsa-miR-4534 1 0 0
chr8:143983646|143984023 hsa-miR-1587 1 0 0
chr8:143983646|143984023 hsa-miR-4658 1 0 0
chr8:143983646|143984023 hsa-miR-4688 1 1 0
chr8:143983646|143984023 hsa-miR-4706 1 0 0
chr8:143983646|143984023 hsa-miR-4739 1 1 0
chr8:143983646|143984023 hsa-miR-4741 1 0 0
chr8:143983646|143984023 hsa-miR-6076 1 0 0
chr8:143983646|143984023 hsa-miR-6081 1 1 0
chr8:143983646|143984023 hsa-miR-6085 1 0 0
chr8:143983646|143984023 hsa-miR-6090 1 0 0
chr8:143983646|143984023 hsa-miR-6165 1 0 0
chr8:143983646|143984023 hsa-miR-134-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4433a-3p 1 0 0
chr8:143983646|143984023 hsa-miR-3150a-3p 1 0 0
chr8:143983646|143984023 hsa-miR-7106-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6825-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6894-5p 1 0 0
chr8:143983646|143984023 hsa-miR-27a-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6799-5p 1 1 0
chr8:143983646|143984023 hsa-miR-3692-5p 0 1 0
chr8:143983646|143984023 hsa-miR-766-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6515-5p 0 1 0
chr8:143983646|143984023 hsa-miR-6880-5p 1 0 0
chr8:143983646|143984023 hsa-miR-7847-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6746-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3064-5p 0 1 0
chr8:143983646|143984023 hsa-miR-7154-3p 1 1 0
chr8:143983646|143984023 hsa-miR-6741-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6776-5p 1 0 0
chr8:143983646|143984023 hsa-miR-432-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3180-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6772-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6732-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6827-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6798-5p 1 0 0
chr8:143983646|143984023 hsa-miR-1224-5p 1 0 0
chr8:143983646|143984023 hsa-miR-486-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6782-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6874-5p 1 0 0
chr8:143983646|143984023 hsa-miR-5006-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6735-3p 0 1 0
chr8:143983646|143984023 hsa-miR-6852-5p 1 0 0
chr8:143983646|143984023 hsa-miR-5088-5p 1 0 0
chr8:143983646|143984023 hsa-miR-1226-5p 0 1 0
chr8:143983646|143984023 hsa-miR-4640-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3127-5p 0 1 0
chr8:143983646|143984023 hsa-miR-1908-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6771-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3677-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6749-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6847-5p 0 1 0
chr8:143983646|143984023 hsa-miR-7854-3p 1 1 0
chr8:143983646|143984023 hsa-miR-4787-5p 1 0 0
chr8:143983646|143984023 hsa-miR-149-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6824-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6781-5p 1 0 0
chr8:143983646|143984023 hsa-miR-490-3p 1 0 0
chr8:143983646|143984023 hsa-miR-3191-3p 1 0 0
chr8:143983646|143984023 hsa-miR-598-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3664-3p 0 1 0
chr8:143983646|143984023 hsa-miR-4802-5p 0 1 0
chr8:143983646|143984023 hsa-miR-1207-5p 1 0 0
chr8:143983646|143984023 hsa-miR-1233-5p 1 0 0
chr8:143983646|143984023 hsa-miR-1273h-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4763-3p 1 0 0
chr8:143983646|143984023 hsa-miR-6778-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6787-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6812-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6870-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6775-5p 1 1 0
chr8:143983646|143984023 hsa-miR-1343-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3180 1 0 0
chr8:143983646|143984023 hsa-miR-5001-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6726-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6737-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6743-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6752-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6754-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6803-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6813-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6815-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6819-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6842-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6851-5p 1 1 0
chr8:143983646|143984023 hsa-miR-7107-5p 1 0 0
chr8:143983646|143984023 hsa-miR-7110-5p 1 0 0
chr8:143983646|143984023 hsa-miR-11181-3p 1 1 0
chr8:143983646|143984023 hsa-miR-1249-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6763-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6797-5p 1 1 0
chr8:143983646|143984023 hsa-miR-7111-5p 1 1 0
chr8:143983646|143984023 hsa-miR-1915-3p 0 1 0
chr8:143983646|143984023 hsa-miR-3620-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4728-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6862-5p 0 1 0
chr8:143983646|143984023 hsa-miR-10396b-5p 1 0 0
chr8:143983646|143984023 hsa-miR-1237-5p 1 0 0
chr8:143983646|143984023 hsa-miR-328-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4649-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4685-5p 1 1 0
chr8:143983646|143984023 hsa-miR-4726-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6729-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6735-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6777-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6794-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6795-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6846-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6848-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6858-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6887-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6889-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6831-5p 1 0 0
chr8:143983646|143984023 hsa-miR-939-5p 1 1 0
chr8:143983646|143984023 hsa-miR-3199 1 0 0
chr8:143983646|143984023 hsa-miR-7843-5p 1 0 0
chr8:143983646|143984023 hsa-miR-4747-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6785-5p 1 1 0
chr8:143983646|143984023 hsa-miR-3184-5p 1 1 0
chr8:143983646|143984023 hsa-miR-6790-5p 1 0 0
chr8:143983646|143984023 hsa-miR-6791-5p 1 0 0
chr8:143983646|143984023 hsa-miR-3085-3p 0 1 0
chr8:143983646|143984023 hsa-miR-6764-5p 0 1 0
chr8:143983646|143984023 hsa-miR-7973 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143983646|143984023
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence LGATVLGATGSSSSCPGVTSSSGCS
Nucleotide Sequence CTGGGTGCCACAGTGCTGGGGGCCACAGGCTCCTCCTCCTCATGCCCTGGGGTCACCTCCTCCTCTGGCTGCTCCTGA
CircID chr8:143983646|143984023
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MGSPPPLAAPEALPPPAPEAASPPRLGLGPPGWPAVLGPPPGSRP
Nucleotide Sequence CTGGGGTCACCTCCTCCTCTGGCTGCTCCTGAGGCCCTTCCTCCTCCAGCTCCCGAGGCAGCCAGTCCTCCCCGTCTAGGTCTAGGCCCTCCAGGGTGGCCAGCAGTTCTCGGACCTCCTCCAGGCTCACGTCCT
CircID chr8:143983646|143984023
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MPWGHLLLWLLLRPFLLQLPRQPVLPV
Nucleotide Sequence ATGCCCTGGGGTCACCTCCTCCTCTGGCTGCTCCTGAGGCCCTTCCTCCTCCAGCTCCCGAGGCAGCCAGTCCTCCCCGTCTAG
CircID chr8:143983646|143984023
ORF Type ORF4
Protein Length 56
Nucleotide Length 168
Protein Sequence MEEVRELLATLEGLDLDGEDWLPRELEEEGPQEQPEEEVTPGHEEEEPVAPSTVAP
Nucleotide Sequence CTGGAGGAGGTCCGAGAACTGCTGGCCACCCTGGAGGGCCTAGACCTAGACGGGGAGGACTGGCTGCCTCGGGAGCTGGAGGAGGAAGGGCCTCAGGAGCAGCCAGAGGAGGAGGTGACCCCAGGGCATGAGGAGGAGGAGCCTGTGGCCCCCAGCACTGTGGCACCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab