CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143985755|143985888
Strand +
CircType exon
Host Gene ENSG00000178685.12;
Algorism CIRI2;
Sequence GCCTGCTGCTCCAAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGTGCCTTGGCCAGCCCCCGGCCAGACCGGGCT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143985755|143985888 hsa-miR-15a-5p 0 0 1
chr8:143985755|143985888 hsa-miR-15a-3p 0 0 1
chr8:143985755|143985888 hsa-miR-214-5p 0 0 1
chr8:143985755|143985888 hsa-miR-214-3p 0 0 1
chr8:143985755|143985888 hsa-miR-15b-5p 0 0 1
chr8:143985755|143985888 hsa-miR-15b-3p 0 0 1
chr8:143985755|143985888 hsa-miR-195-5p 0 0 1
chr8:143985755|143985888 hsa-miR-195-3p 0 0 1
chr8:143985755|143985888 hsa-miR-424-5p 0 0 1
chr8:143985755|143985888 hsa-miR-424-3p 0 0 1
chr8:143985755|143985888 hsa-miR-432-5p 0 0 1
chr8:143985755|143985888 hsa-miR-432-3p 0 0 1
chr8:143985755|143985888 hsa-miR-497-5p 0 0 1
chr8:143985755|143985888 hsa-miR-497-3p 0 0 1
chr8:143985755|143985888 hsa-miR-518e-5p 0 0 1
chr8:143985755|143985888 hsa-miR-518e-3p 0 0 1
chr8:143985755|143985888 hsa-miR-506-5p 0 0 1
chr8:143985755|143985888 hsa-miR-506-3p 0 0 1
chr8:143985755|143985888 hsa-miR-920 0 0 1
chr8:143985755|143985888 hsa-miR-1225-3p 0 1 1
chr8:143985755|143985888 hsa-miR-486-3p 0 0 1
chr8:143985755|143985888 hsa-miR-16 0 0 1
chr8:143985755|143985888 hsa-miR-124 0 0 1
chr8:143985755|143985888 hsa-miR-1268 0 0 1
chr8:143985755|143985888 hsa-miR-1254 0 0 1
chr8:143985755|143985888 hsa-miR-608 1 0 0
chr8:143985755|143985888 hsa-miR-637 0 1 0
chr8:143985755|143985888 hsa-miR-762 1 1 0
chr8:143985755|143985888 hsa-miR-761 0 1 0
chr8:143985755|143985888 hsa-miR-1268a 1 1 0
chr8:143985755|143985888 hsa-miR-1538 1 0 0
chr8:143985755|143985888 hsa-miR-3196 1 0 0
chr8:143985755|143985888 hsa-miR-1268b 1 1 0
chr8:143985755|143985888 hsa-miR-4498 0 1 0
chr8:143985755|143985888 hsa-miR-4741 1 0 0
chr8:143985755|143985888 hsa-miR-5787 1 0 0
chr8:143985755|143985888 hsa-miR-8089 1 0 0
chr8:143985755|143985888 hsa-miR-6747-5p 1 0 0
chr8:143985755|143985888 hsa-miR-486-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6089 1 0 0
chr8:143985755|143985888 hsa-miR-185-3p 0 1 0
chr8:143985755|143985888 hsa-miR-6805-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6827-5p 0 1 0
chr8:143985755|143985888 hsa-miR-5006-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6786-5p 1 0 0
chr8:143985755|143985888 hsa-miR-939-3p 0 1 0
chr8:143985755|143985888 hsa-miR-6753-5p 1 1 0
chr8:143985755|143985888 hsa-miR-619-3p 0 1 0
chr8:143985755|143985888 hsa-miR-4638-3p 0 1 0
chr8:143985755|143985888 hsa-miR-6789-5p 1 0 0
chr8:143985755|143985888 hsa-miR-4708-3p 0 1 0
chr8:143985755|143985888 hsa-miR-3120-3p 0 1 0
chr8:143985755|143985888 hsa-miR-6812-5p 1 0 0
chr8:143985755|143985888 hsa-miR-5001-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6726-5p 1 1 0
chr8:143985755|143985888 hsa-miR-6752-5p 1 1 0
chr8:143985755|143985888 hsa-miR-6819-5p 1 0 0
chr8:143985755|143985888 hsa-miR-6763-5p 1 0 0
chr8:143985755|143985888 hsa-miR-1909-3p 1 0 0
chr8:143985755|143985888 hsa-miR-6729-5p 1 0 0
chr8:143985755|143985888 hsa-miR-6846-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6848-5p 0 1 0
chr8:143985755|143985888 hsa-miR-498-5p 0 1 0
chr8:143985755|143985888 hsa-miR-6724-5p 1 0 0
chr8:143985755|143985888 hsa-miR-6791-5p 1 0 0
chr8:143985755|143985888 hsa-miR-6837-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143985755|143985888
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MAPRPSAWSSMSRPCCGPRGSQYSLAVPWPAPGQTG
Nucleotide Sequence CTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGTGCCTTGGCCAGCCCCCGGCCAGACCGGG

CircID chr8:143985755|143985888
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence LLLQGLPPGTTPQRLEQHVQALLRASGLPVQPCCALASPRPDRA
Nucleotide Sequence CTGCTGCTCCAAGGACTGCCCCCTGGCACCACGCCCCAGCGCTTGGAGCAGCATGTCCAGGCCTTGCTGCGGGCCTCGGGGCTCCCAGTACAGCCTTGCTGTGCCTTGGCCAGCCCCCGGCCAGACCGGGCT

CircID chr8:143985755|143985888
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MYWEPRGPQQGLDMLLQALGRGARGQSLEQQ
Nucleotide Sequence CTGTACTGGGAGCCCCGAGGCCCGCAGCAAGGCCTGGACATGCTGCTCCAAGCGCTGGGGCGTGGTGCCAGGGGGCAGTCCTTGGAGCAGCAG

CircID chr8:143985755|143985888
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MAKAQQGCTGSPEARSKAWTCCSKRWGVVPGGSPWSSR
Nucleotide Sequence CTGGCCAAGGCACAGCAAGGCTGTACTGGGAGCCCCGAGGCCCGCAGCAAGGCCTGGACATGCTGCTCCAAGCGCTGGGGCGTGGTGCCAGGGGGCAGTCCTTGGAGCAGCAGG

CircID chr8:143985755|143985888
ORF Type ORF5
Protein Length 42
Nucleotide Length 126
Protein Sequence MAGGWPRHSKAVLGAPRPAARPGHAAPSAGAWCQGAVLGAAG
Nucleotide Sequence CTGGCCGGGGGCTGGCCAAGGCACAGCAAGGCTGTACTGGGAGCCCCGAGGCCCGCAGCAAGGCCTGGACATGCTGCTCCAAGCGCTGGGGCGTGGTGCCAGGGGGCAGTCCTTGGAGCAGCAGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites