CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143991578|143991804
Strand +
CircType exon
Host Gene ENSG00000178719.15;
Algorism CIRI2;
Sequence CTTGCGGATGAAGGCCTGTCGGATGCTCTTGTCATCCCAGTTGGTGGCAGGGAAGTCCTGGTTGTCATAGTAGGATGGGGGACCCTCCTCCTGGTAGTTTCCATGCTGGGGTGCTGAGAAGCAGACAGGCTGGGTCAGCGCCACTCACAAGCACCTCCCCCTGCCCTCCCGGCCACCCCACCCCTCCCTTCCTGAGACTCACAGTCAGGGTCTTGTCCTGGGAAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143991578|143991804 hsa-miR-205-5p 0 0 1
chr8:143991578|143991804 hsa-miR-205-3p 0 0 1
chr8:143991578|143991804 hsa-miR-335-5p 0 0 1
chr8:143991578|143991804 hsa-miR-335-3p 0 0 1
chr8:143991578|143991804 hsa-miR-346 0 0 1
chr8:143991578|143991804 hsa-miR-425-5p 0 0 1
chr8:143991578|143991804 hsa-miR-425-3p 0 0 1
chr8:143991578|143991804 hsa-miR-504-5p 0 0 1
chr8:143991578|143991804 hsa-miR-504-3p 0 0 1
chr8:143991578|143991804 hsa-miR-608 1 1 1
chr8:143991578|143991804 hsa-miR-617 0 0 1
chr8:143991578|143991804 hsa-miR-627-5p 0 0 1
chr8:143991578|143991804 hsa-miR-627-3p 0 0 1
chr8:143991578|143991804 hsa-miR-632 0 1 1
chr8:143991578|143991804 hsa-miR-636 0 0 1
chr8:143991578|143991804 hsa-miR-765 0 0 1
chr8:143991578|143991804 hsa-miR-665 0 1 1
chr8:143991578|143991804 hsa-miR-873-5p 0 0 1
chr8:143991578|143991804 hsa-miR-873-3p 0 0 1
chr8:143991578|143991804 hsa-miR-924 0 0 1
chr8:143991578|143991804 hsa-miR-943 0 0 1
chr8:143991578|143991804 hsa-miR-1266-5p 0 0 1
chr8:143991578|143991804 hsa-miR-1266-3p 0 0 1
chr8:143991578|143991804 hsa-miR-1321 1 0 1
chr8:143991578|143991804 hsa-miR-361-3p 0 0 1
chr8:143991578|143991804 hsa-miR-338-3p 0 0 1
chr8:143991578|143991804 hsa-miR-1207-5p 1 0 1
chr8:143991578|143991804 hsa-miR-342-5p 0 0 1
chr8:143991578|143991804 hsa-miR-1274a 0 0 1
chr8:143991578|143991804 hsa-miR-549 0 0 1
chr8:143991578|143991804 hsa-miR-638 1 0 0
chr8:143991578|143991804 hsa-miR-663a 1 0 0
chr8:143991578|143991804 hsa-miR-762 1 0 0
chr8:143991578|143991804 hsa-miR-940 1 0 0
chr8:143991578|143991804 hsa-miR-1291 0 1 0
chr8:143991578|143991804 hsa-miR-1293 1 0 0
chr8:143991578|143991804 hsa-miR-1268a 1 0 0
chr8:143991578|143991804 hsa-miR-1275 1 0 0
chr8:143991578|143991804 hsa-miR-3132 1 0 0
chr8:143991578|143991804 hsa-miR-3141 1 1 0
chr8:143991578|143991804 hsa-miR-3196 1 0 0
chr8:143991578|143991804 hsa-miR-4270 1 1 0
chr8:143991578|143991804 hsa-miR-3665 1 0 0
chr8:143991578|143991804 hsa-miR-1268b 1 0 0
chr8:143991578|143991804 hsa-miR-3689c 1 0 0
chr8:143991578|143991804 hsa-miR-4488 1 0 0
chr8:143991578|143991804 hsa-miR-4498 1 0 0
chr8:143991578|143991804 hsa-miR-4507 1 0 0
chr8:143991578|143991804 hsa-miR-4525 1 0 0
chr8:143991578|143991804 hsa-miR-4526 1 0 0
chr8:143991578|143991804 hsa-miR-1587 1 0 0
chr8:143991578|143991804 hsa-miR-4651 1 1 0
chr8:143991578|143991804 hsa-miR-4669 1 0 0
chr8:143991578|143991804 hsa-miR-4688 1 0 0
chr8:143991578|143991804 hsa-miR-4706 1 0 0
chr8:143991578|143991804 hsa-miR-4721 1 0 0
chr8:143991578|143991804 hsa-miR-4739 1 1 0
chr8:143991578|143991804 hsa-miR-5090 1 0 0
chr8:143991578|143991804 hsa-miR-5194 1 0 0
chr8:143991578|143991804 hsa-miR-5572 1 0 0
chr8:143991578|143991804 hsa-miR-5698 1 1 0
chr8:143991578|143991804 hsa-miR-5787 1 0 0
chr8:143991578|143991804 hsa-miR-6068 1 0 0
chr8:143991578|143991804 hsa-miR-6090 1 0 0
chr8:143991578|143991804 hsa-miR-6127 1 1 0
chr8:143991578|143991804 hsa-miR-6132 1 0 0
chr8:143991578|143991804 hsa-miR-6133 1 0 0
chr8:143991578|143991804 hsa-miR-7150 1 0 0
chr8:143991578|143991804 hsa-miR-8083 0 1 0
chr8:143991578|143991804 hsa-miR-12114 1 0 0
chr8:143991578|143991804 hsa-miR-4433b-3p 1 0 0
chr8:143991578|143991804 hsa-miR-4731-5p 1 0 0
chr8:143991578|143991804 hsa-miR-323a-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6747-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4433a-3p 1 0 0
chr8:143991578|143991804 hsa-miR-7106-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6825-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6799-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6510-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6728-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6089 1 0 0
chr8:143991578|143991804 hsa-miR-6757-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6880-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6746-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4722-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6741-5p 1 0 0
chr8:143991578|143991804 hsa-miR-3622b-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6759-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6721-5p 1 1 0
chr8:143991578|143991804 hsa-miR-197-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6849-3p 0 1 0
chr8:143991578|143991804 hsa-miR-4728-3p 1 0 0
chr8:143991578|143991804 hsa-miR-7108-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6742-5p 1 1 0
chr8:143991578|143991804 hsa-miR-3151-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6748-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6732-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6805-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6798-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6782-5p 1 1 0
chr8:143991578|143991804 hsa-miR-30b-3p 1 0 0
chr8:143991578|143991804 hsa-miR-6786-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1226-5p 1 0 0
chr8:143991578|143991804 hsa-miR-204-3p 1 0 0
chr8:143991578|143991804 hsa-miR-1229-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4640-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4715-3p 0 1 0
chr8:143991578|143991804 hsa-miR-885-3p 1 0 0
chr8:143991578|143991804 hsa-miR-1908-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1228-5p 1 0 0
chr8:143991578|143991804 hsa-miR-296-3p 1 0 0
chr8:143991578|143991804 hsa-miR-6771-5p 1 1 0
chr8:143991578|143991804 hsa-miR-3202 0 1 0
chr8:143991578|143991804 hsa-miR-4743-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4787-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4446-5p 0 1 0
chr8:143991578|143991804 hsa-miR-149-3p 1 1 0
chr8:143991578|143991804 hsa-miR-6824-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6825-3p 1 1 0
chr8:143991578|143991804 hsa-miR-7112-5p 1 0 0
chr8:143991578|143991804 hsa-miR-3191-3p 1 0 0
chr8:143991578|143991804 hsa-miR-6752-3p 0 1 0
chr8:143991578|143991804 hsa-miR-4750-3p 0 1 0
chr8:143991578|143991804 hsa-miR-10400-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1233-5p 1 0 0
chr8:143991578|143991804 hsa-miR-3689b-3p 1 0 0
chr8:143991578|143991804 hsa-miR-4763-3p 1 1 0
chr8:143991578|143991804 hsa-miR-6769b-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6778-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6787-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6812-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6816-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6870-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1343-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6737-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6743-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6752-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6754-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6756-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6769a-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6803-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6819-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6842-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6851-5p 1 1 0
chr8:143991578|143991804 hsa-miR-7107-5p 1 0 0
chr8:143991578|143991804 hsa-miR-7110-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1249-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6722-3p 1 1 0
chr8:143991578|143991804 hsa-miR-6751-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6779-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6780a-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6797-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6808-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6879-5p 1 1 0
chr8:143991578|143991804 hsa-miR-7111-5p 1 0 0
chr8:143991578|143991804 hsa-miR-3620-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4728-5p 1 1 0
chr8:143991578|143991804 hsa-miR-5196-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6836-5p 1 0 0
chr8:143991578|143991804 hsa-miR-10396b-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1237-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1909-3p 1 1 0
chr8:143991578|143991804 hsa-miR-328-5p 1 1 0
chr8:143991578|143991804 hsa-miR-3689a-3p 1 0 0
chr8:143991578|143991804 hsa-miR-4632-5p 1 1 0
chr8:143991578|143991804 hsa-miR-4649-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4725-3p 1 0 0
chr8:143991578|143991804 hsa-miR-4745-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6729-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6735-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6738-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6794-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6795-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6846-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6848-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6883-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6887-5p 1 0 0
chr8:143991578|143991804 hsa-miR-4436b-3p 1 1 0
chr8:143991578|143991804 hsa-miR-4723-5p 1 0 0
chr8:143991578|143991804 hsa-miR-6885-5p 1 0 0
chr8:143991578|143991804 hsa-miR-939-5p 1 0 0
chr8:143991578|143991804 hsa-miR-1238-5p 1 1 0
chr8:143991578|143991804 hsa-miR-6731-5p 1 0 0
chr8:143991578|143991804 hsa-miR-7843-5p 1 1 0
chr8:143991578|143991804 hsa-miR-1914-3p 1 0 0
chr8:143991578|143991804 hsa-miR-4716-3p 1 0 0
chr8:143991578|143991804 hsa-miR-6785-5p 1 1 0
chr8:143991578|143991804 hsa-miR-3689d 1 0 0
chr8:143991578|143991804 hsa-miR-4722-3p 0 1 0
chr8:143991578|143991804 hsa-miR-6727-3p 0 1 0
chr8:143991578|143991804 hsa-miR-6801-3p 0 1 0
chr8:143991578|143991804 hsa-miR-619-5p 0 1 0
chr8:143991578|143991804 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:143991578|143991804
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MSDALVIPVGGREVLVVIVGWGTLLLVVSMLGC
Nucleotide Sequence CTGTCGGATGCTCTTGTCATCCCAGTTGGTGGCAGGGAAGTCCTGGTTGTCATAGTAGGATGGGGGACCCTCCTCCTGGTAGTTTCCATGCTGGGGTGCTGA
CircID chr8:143991578|143991804
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MGDPPPGSFHAGVLRSRQAGSAPLTSTSPCPPGHPTPPFLRLTVRVLSWED
Nucleotide Sequence ATGGGGGACCCTCCTCCTGGTAGTTTCCATGCTGGGGTGCTGAGAAGCAGACAGGCTGGGTCAGCGCCACTCACAAGCACCTCCCCCTGCCCTCCCGGCCACCCCACCCCTCCCTTCCTGAGACTCACAGTCAGGGTCTTGTCCTGGGAAGAC
CircID chr8:143991578|143991804
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MSASQHPSMETTRRRVPHPTMTTRTSLPPTGMTRASDRPSSA
Nucleotide Sequence CTGTCTGCTTCTCAGCACCCCAGCATGGAAACTACCAGGAGGAGGGTCCCCCATCCTACTATGACAACCAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCA
CircID chr8:143991578|143991804
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MTVSLRKGGVGWPGGQGEVLVSGADPACLLLSTPAWKLPGGGSPILL
Nucleotide Sequence CTGACTGTGAGTCTCAGGAAGGGAGGGGTGGGGTGGCCGGGAGGGCAGGGGGAGGTGCTTGTGAGTGGCGCTGACCCAGCCTGTCTGCTTCTCAGCACCCCAGCATGGAAACTACCAGGAGGAGGGTCCCCCATCCTACTATGA
CircID chr8:143991578|143991804
ORF Type ORF5
Protein Length 46
Nucleotide Length 138
Protein Sequence MTQPVCFSAPQHGNYQEEGPPSYYDNQDFPATNWDDKSIRQAFIRK
Nucleotide Sequence CTGACCCAGCCTGTCTGCTTCTCAGCACCCCAGCATGGAAACTACCAGGAGGAGGGTCCCCCATCCTACTATGACAACCAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab