CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143991745|143991981
Strand -
CircType exon
Host Gene ENSG00000178719.15;
Algorism CIRI2;
Sequence CAGGACTTCCCTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGGGGGCTGTGGCTCCCAGCGGATGACTCTGAGCGGCTCCTTCCCCAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGGTGAAGGGCTTTGTCCGGGAGAATGTCTGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143991745|143991981 hsa-miR-198 0 0 1
chr8:143991745|143991981 hsa-miR-412-5p 0 0 1
chr8:143991745|143991981 hsa-miR-412-3p 0 0 1
chr8:143991745|143991981 hsa-miR-432-5p 0 0 1
chr8:143991745|143991981 hsa-miR-432-3p 0 0 1
chr8:143991745|143991981 hsa-miR-620 0 0 1
chr8:143991745|143991981 hsa-miR-920 0 0 1
chr8:143991745|143991981 hsa-miR-1270 0 0 1
chr8:143991745|143991981 hsa-miR-1224-3p 0 0 1
chr8:143991745|143991981 hsa-miR-1207-5p 1 1 1
chr8:143991745|143991981 hsa-miR-1280 0 0 1
chr8:143991745|143991981 hsa-miR-129-3p 0 0 1
chr8:143991745|143991981 hsa-miR-658 1 0 0
chr8:143991745|143991981 hsa-miR-1202 1 0 0
chr8:143991745|143991981 hsa-miR-2110 1 1 0
chr8:143991745|143991981 hsa-miR-3138 0 1 0
chr8:143991745|143991981 hsa-miR-3154 1 0 0
chr8:143991745|143991981 hsa-miR-3943 0 1 0
chr8:143991745|143991981 hsa-miR-4493 0 1 0
chr8:143991745|143991981 hsa-miR-4526 1 0 0
chr8:143991745|143991981 hsa-miR-4533 1 1 0
chr8:143991745|143991981 hsa-miR-4688 1 0 0
chr8:143991745|143991981 hsa-miR-4739 1 0 0
chr8:143991745|143991981 hsa-miR-6126 0 1 0
chr8:143991745|143991981 hsa-miR-8089 1 1 0
chr8:143991745|143991981 hsa-miR-9899 1 0 0
chr8:143991745|143991981 hsa-miR-214-5p 0 1 0
chr8:143991745|143991981 hsa-miR-4731-5p 0 1 0
chr8:143991745|143991981 hsa-miR-4665-3p 1 0 0
chr8:143991745|143991981 hsa-miR-6825-5p 1 0 0
chr8:143991745|143991981 hsa-miR-4708-5p 0 1 0
chr8:143991745|143991981 hsa-miR-210-5p 1 1 0
chr8:143991745|143991981 hsa-miR-7851-3p 0 1 0
chr8:143991745|143991981 hsa-miR-6089 1 0 0
chr8:143991745|143991981 hsa-miR-3192-5p 0 1 0
chr8:143991745|143991981 hsa-miR-6840-5p 0 1 0
chr8:143991745|143991981 hsa-miR-7845-5p 1 0 0
chr8:143991745|143991981 hsa-miR-3180-3p 1 0 0
chr8:143991745|143991981 hsa-miR-3190-3p 1 0 0
chr8:143991745|143991981 hsa-miR-6827-5p 1 1 0
chr8:143991745|143991981 hsa-miR-6798-5p 1 0 0
chr8:143991745|143991981 hsa-miR-6735-3p 0 1 0
chr8:143991745|143991981 hsa-miR-3934-3p 1 0 0
chr8:143991745|143991981 hsa-miR-149-3p 1 0 0
chr8:143991745|143991981 hsa-miR-1306-5p 0 1 0
chr8:143991745|143991981 hsa-miR-2276-3p 0 1 0
chr8:143991745|143991981 hsa-miR-3065-5p 0 1 0
chr8:143991745|143991981 hsa-miR-629-3p 0 1 0
chr8:143991745|143991981 hsa-miR-6886-3p 0 1 0
chr8:143991745|143991981 hsa-miR-449b-3p 0 1 0
chr8:143991745|143991981 hsa-miR-3200-3p 0 1 0
chr8:143991745|143991981 hsa-miR-500a-3p 1 0 0
chr8:143991745|143991981 hsa-miR-4763-3p 1 1 0
chr8:143991745|143991981 hsa-miR-6816-5p 1 0 0
chr8:143991745|143991981 hsa-miR-3180 1 0 0
chr8:143991745|143991981 hsa-miR-6803-5p 1 0 0
chr8:143991745|143991981 hsa-miR-7111-5p 1 0 0
chr8:143991745|143991981 hsa-miR-6754-3p 0 1 0
chr8:143991745|143991981 hsa-miR-4728-5p 1 0 0
chr8:143991745|143991981 hsa-miR-5196-5p 1 1 0
chr8:143991745|143991981 hsa-miR-6780b-5p 1 1 0
chr8:143991745|143991981 hsa-miR-1237-5p 1 0 0
chr8:143991745|143991981 hsa-miR-1909-3p 1 0 0
chr8:143991745|143991981 hsa-miR-4649-5p 1 0 0
chr8:143991745|143991981 hsa-miR-4725-3p 1 1 0
chr8:143991745|143991981 hsa-miR-6729-5p 1 0 0
chr8:143991745|143991981 hsa-miR-4747-5p 1 1 0
chr8:143991745|143991981 hsa-miR-6750-5p 1 0 0
chr8:143991745|143991981 hsa-miR-6791-5p 1 0 0
chr8:143991745|143991981 hsa-miR-4756-5p 1 0 0
chr8:143991745|143991981 hsa-miR-6744-3p 1 0 0
chr8:143991745|143991981 hsa-miR-129-1-3p 0 1 0
chr8:143991745|143991981 hsa-miR-129-2-3p 0 1 0
chr8:143991745|143991981 hsa-miR-548az-5p 0 1 0
chr8:143991745|143991981 hsa-miR-548t-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143991745|143991981
ORF Type ORF1
Protein Length 75
Nucleotide Length 225
Protein Sequence MPPTGMTRASDRPSSARWVGASPRRWGLWLPADDSERLLPQVFLVLTLQLSVTLSTVSVFTFVAEVKGFVRENVW
Nucleotide Sequence CTGCCACCAACTGGGATGACAAGAGCATCCGACAGGCCTTCATCCGCAAGGTGGGTAGGGGCATCTCCAAGGCGGTGGGGGCTGTGGCTCCCAGCGGATGACTCTGAGCGGCTCCTTCCCCAGGTGTTCCTAGTGCTGACCTTGCAGCTGTCGGTGACCCTGTCCACGGTGTCTGTGTTCACTTTTGTTGCGGAGGTGAAGGGCTTTGTCCGGGAGAATGTCTGG

CircID chr8:143991745|143991981
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MGATAPTALEMPLPTLRMKACRMLLSSQLVAGKS
Nucleotide Sequence CTGGGAGCCACAGCCCCCACCGCCTTGGAGATGCCCCTACCCACCTTGCGGATGAAGGCCTGTCGGATGCTCTTGTCATCCCAGTTGGTGGCAGGGAAGTCC

CircID chr8:143991745|143991981
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence MGKEPLRVIRWEPQPPPPWRCPYPPCG
Nucleotide Sequence CTGGGGAAGGAGCCGCTCAGAGTCATCCGCTGGGAGCCACAGCCCCCACCGCCTTGGAGATGCCCCTACCCACCTTGCGGATGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites