CircRNA Information

General Information
circRNA Basic Information
CircID chr8:143992962|143993186
Strand +
CircType exon
Host Gene ENSG00000178719.15;
Algorism CIRI2;
Sequence CTCTTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGCCCCCAGTCCCTGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGCGGGGGCGGGAGGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:143992962|143993186 hsa-miR-29a-5p 0 0 1
chr8:143992962|143993186 hsa-miR-29a-3p 0 0 1
chr8:143992962|143993186 hsa-miR-29c-5p 0 0 1
chr8:143992962|143993186 hsa-miR-29c-3p 0 0 1
chr8:143992962|143993186 hsa-miR-346 0 1 1
chr8:143992962|143993186 hsa-miR-567 0 0 1
chr8:143992962|143993186 hsa-miR-588 0 1 1
chr8:143992962|143993186 hsa-miR-632 0 0 1
chr8:143992962|143993186 hsa-miR-637 0 1 1
chr8:143992962|143993186 hsa-miR-934 0 0 1
chr8:143992962|143993186 hsa-miR-297 0 0 1
chr8:143992962|143993186 hsa-miR-1227-5p 0 0 1
chr8:143992962|143993186 hsa-miR-1227-3p 0 0 1
chr8:143992962|143993186 hsa-miR-1202 0 1 1
chr8:143992962|143993186 hsa-miR-663b 0 0 1
chr8:143992962|143993186 hsa-miR-486-5p 1 0 1
chr8:143992962|143993186 hsa-miR-1225-3p 0 0 1
chr8:143992962|143993186 hsa-miR-486-3p 0 1 1
chr8:143992962|143993186 hsa-miR-146b-3p 0 0 1
chr8:143992962|143993186 hsa-miR-339-5p 0 1 1
chr8:143992962|143993186 hsa-miR-509-3-5p 0 1 1
chr8:143992962|143993186 hsa-miR-509-5p 0 0 1
chr8:143992962|143993186 hsa-miR-515-5p 0 0 1
chr8:143992962|143993186 hsa-miR-1233 0 0 1
chr8:143992962|143993186 hsa-miR-29b 0 0 1
chr8:143992962|143993186 hsa-miR-762 1 1 0
chr8:143992962|143993186 hsa-miR-1248 0 1 0
chr8:143992962|143993186 hsa-miR-1470 1 0 0
chr8:143992962|143993186 hsa-miR-1913 1 0 0
chr8:143992962|143993186 hsa-miR-1976 1 0 0
chr8:143992962|143993186 hsa-miR-718 1 0 0
chr8:143992962|143993186 hsa-miR-3132 1 0 0
chr8:143992962|143993186 hsa-miR-3142 1 0 0
chr8:143992962|143993186 hsa-miR-3183 1 1 0
chr8:143992962|143993186 hsa-miR-4281 1 1 0
chr8:143992962|143993186 hsa-miR-3685 1 0 0
chr8:143992962|143993186 hsa-miR-4449 0 1 0
chr8:143992962|143993186 hsa-miR-3972 1 1 0
chr8:143992962|143993186 hsa-miR-4688 1 1 0
chr8:143992962|143993186 hsa-miR-6085 1 1 0
chr8:143992962|143993186 hsa-miR-8052 0 1 0
chr8:143992962|143993186 hsa-miR-8085 1 1 0
chr8:143992962|143993186 hsa-miR-8089 1 1 0
chr8:143992962|143993186 hsa-miR-6749-3p 1 1 0
chr8:143992962|143993186 hsa-miR-214-5p 1 1 0
chr8:143992962|143993186 hsa-miR-15a-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6836-3p 1 0 0
chr8:143992962|143993186 hsa-miR-149-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6825-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6720-5p 1 0 0
chr8:143992962|143993186 hsa-miR-1233-3p 0 1 0
chr8:143992962|143993186 hsa-miR-766-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6892-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6881-3p 1 0 0
chr8:143992962|143993186 hsa-miR-874-5p 1 0 0
chr8:143992962|143993186 hsa-miR-7110-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6845-3p 1 0 0
chr8:143992962|143993186 hsa-miR-3194-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6810-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6815-3p 1 0 0
chr8:143992962|143993186 hsa-miR-7109-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4793-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4707-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6818-3p 1 0 0
chr8:143992962|143993186 hsa-miR-7111-3p 1 1 0
chr8:143992962|143993186 hsa-miR-4667-3p 0 1 0
chr8:143992962|143993186 hsa-miR-4733-3p 0 1 0
chr8:143992962|143993186 hsa-miR-6824-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4640-3p 1 0 0
chr8:143992962|143993186 hsa-miR-7850-5p 0 1 0
chr8:143992962|143993186 hsa-miR-3065-3p 0 1 0
chr8:143992962|143993186 hsa-miR-1236-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6743-3p 1 0 0
chr8:143992962|143993186 hsa-miR-3120-5p 1 1 0
chr8:143992962|143993186 hsa-miR-493-5p 1 1 0
chr8:143992962|143993186 hsa-miR-660-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6854-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4687-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4664-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6793-3p 1 0 0
chr8:143992962|143993186 hsa-miR-1224-3p 0 1 0
chr8:143992962|143993186 hsa-miR-6895-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4529-3p 0 1 0
chr8:143992962|143993186 hsa-miR-6886-3p 1 0 0
chr8:143992962|143993186 hsa-miR-5088-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4749-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6777-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6794-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6768-3p 0 1 0
chr8:143992962|143993186 hsa-miR-130b-5p 1 0 0
chr8:143992962|143993186 hsa-miR-1229-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6779-3p 0 1 0
chr8:143992962|143993186 hsa-miR-676-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4727-5p 0 1 0
chr8:143992962|143993186 hsa-miR-3152-5p 1 0 0
chr8:143992962|143993186 hsa-miR-5089-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4716-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6816-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6870-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6743-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6813-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6842-5p 1 0 0
chr8:143992962|143993186 hsa-miR-1249-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6797-5p 0 1 0
chr8:143992962|143993186 hsa-miR-3127-3p 1 0 0
chr8:143992962|143993186 hsa-miR-320a-5p 1 0 0
chr8:143992962|143993186 hsa-miR-5196-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4649-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6729-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6777-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6795-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4723-5p 1 1 0
chr8:143992962|143993186 hsa-miR-7843-5p 0 1 0
chr8:143992962|143993186 hsa-miR-6791-3p 1 0 0
chr8:143992962|143993186 hsa-miR-4646-5p 1 0 0
chr8:143992962|143993186 hsa-miR-6724-5p 1 1 0
chr8:143992962|143993186 hsa-miR-2682-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6792-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6775-3p 1 0 0
chr8:143992962|143993186 hsa-miR-9851-3p 0 1 0
chr8:143992962|143993186 hsa-miR-3059-5p 1 0 0
chr8:143992962|143993186 hsa-miR-4723-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6512-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6769b-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6823-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6744-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6781-3p 1 1 0
chr8:143992962|143993186 hsa-miR-6764-5p 0 1 0
chr8:143992962|143993186 hsa-miR-4690-3p 0 1 0
chr8:143992962|143993186 hsa-miR-6797-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6833-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6824-3p 1 0 0
chr8:143992962|143993186 hsa-miR-6807-3p 1 0 0
chr8:143992962|143993186 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:143992962|143993186
ORF Type ORF1
Protein Length 47
Nucleotide Length 144
Protein Sequence MAQSLSPGPGAAPSPWGGLADRAHATMSRQEVARKRGLGAPWRGRED
Nucleotide Sequence TTGGCTCAATCCCTCTCCCCGGGACCTGGTGCTGCCCCCAGTCCCTGGGGTGGGCTGGCAGACAGGGCTCATGCAACAATGAGTAGACAGGAGGTGGCACGGAAACGTGGCCTTGGTGCCCCTTGGCGGGGGCGGGAGGACTAA

CircID chr8:143992962|143993186
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MVPLGGGGRTKGAMLWPQRVQMEVSAVYIQEGWREA
Nucleotide Sequence TTGGTGCCCCTTGGCGGGGGCGGGAGGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCA

CircID chr8:143992962|143993186
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MAGAGGLKGPCCGHSGSKWKYLQCTYRRVGERH
Nucleotide Sequence TTGGCGGGGGCGGGAGGACTAAAGGGGCCATGCTGTGGCCACAGCGGGTCCAAATGGAAGTATCTGCAGTGTACATACAGGAGGGTTGGAGAGAGGCAT

CircID chr8:143992962|143993186
ORF Type ORF4
Protein Length 67
Nucleotide Length 201
Protein Sequence MYTADTSIWTRCGHSMAPLVLPPPPRGTKATFPCHLLSTHCCMSPVCQPTPGTGGSTRSRGEGLSQE
Nucleotide Sequence ATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCCTCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCAGGGACTGGGGGCAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGAG

CircID chr8:143992962|143993186
ORF Type ORF5
Protein Length 26
Nucleotide Length 81
Protein Sequence MPLSNPPVCTLQILPFGPAVATAWPL
Nucleotide Sequence ATGCCTCTCTCCAACCCTCCTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAG

CircID chr8:143992962|143993186
ORF Type ORF6
Protein Length 68
Nucleotide Length 204
Protein Sequence MYVHCRYFHLDPLWPQHGPFSPPAPAKGHQGHVSVPPPVYSLLHEPCLPAHPRDWGQHQVPGRGIEPR
Nucleotide Sequence CTGTATGTACACTGCAGATACTTCCATTTGGACCCGCTGTGGCCACAGCATGGCCCCTTTAGTCCTCCCGCCCCCGCCAAGGGGCACCAAGGCCACGTTTCCGTGCCACCTCCTGTCTACTCATTGTTGCATGAGCCCTGTCTGCCAGCCCACCCCAGGGACTGGGGGCAGCACCAGGTCCCGGGGAGAGGGATTGAGCCAAGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites