CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144083057|144083440
Strand +
CircType exon
Host Gene ENSG00000197858.9;
Algorism CIRI2;
Sequence CTCCAGCCCTACTGACCGCATCGTCCGTTCAAGCCAGGCCACTGGCAGAGCCCTGCAGACACGAAGGGAGCCTCTGAGCAGAGCTCCCCGGCCTTAGCCACCACTGCTCGCCCCATACGCCCTGCTCTGCCGCTCACCCCGACTTCTTGCGGTGGGCGGCGAAGTCCCGGGCAAAAGCCCGGGCACGGTCTCCGCCCGCAAACTGCTCCTCCACCATGGTGGAGCCCATGGCGTTCTCCGACATGTAAGTGCGCTGGGTCAGCGGCGGGAAAACCAGCGCCAAGAACCAGGCGATGCCCGCCACGTAGCTCAGCACGCTGTGAGAGAGGACGGAGGGGCACCGGAGCGTCAGCGGGTCCTCAGACGCCGACCCGAGGCCACAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144083057|144083440 hsa-miR-187-5p 0 0 1
chr8:144083057|144083440 hsa-miR-187-3p 0 0 1
chr8:144083057|144083440 hsa-miR-346 0 0 1
chr8:144083057|144083440 hsa-miR-585-5p 0 0 1
chr8:144083057|144083440 hsa-miR-585-3p 0 0 1
chr8:144083057|144083440 hsa-miR-610 0 0 1
chr8:144083057|144083440 hsa-miR-632 0 0 1
chr8:144083057|144083440 hsa-miR-765 0 0 1
chr8:144083057|144083440 hsa-miR-887-5p 0 0 1
chr8:144083057|144083440 hsa-miR-887-3p 0 0 1
chr8:144083057|144083440 hsa-miR-760 0 1 1
chr8:144083057|144083440 hsa-miR-920 0 0 1
chr8:144083057|144083440 hsa-miR-936 0 0 1
chr8:144083057|144083440 hsa-miR-939-5p 0 0 1
chr8:144083057|144083440 hsa-miR-939-3p 0 0 1
chr8:144083057|144083440 hsa-miR-663b 1 0 1
chr8:144083057|144083440 hsa-miR-1205 0 1 1
chr8:144083057|144083440 hsa-miR-1224-5p 0 1 1
chr8:144083057|144083440 hsa-miR-1184 0 0 1
chr8:144083057|144083440 hsa-miR-767-3p 0 1 1
chr8:144083057|144083440 hsa-miR-199b-3p 0 0 1
chr8:144083057|144083440 hsa-miR-199a-3p 0 0 1
chr8:144083057|144083440 hsa-miR-342-3p 0 0 1
chr8:144083057|144083440 hsa-miR-1280 0 0 1
chr8:144083057|144083440 hsa-miR-886-5p 0 0 1
chr8:144083057|144083440 hsa-miR-663 0 0 1
chr8:144083057|144083440 hsa-miR-608 1 0 0
chr8:144083057|144083440 hsa-miR-661 1 1 0
chr8:144083057|144083440 hsa-miR-663a 1 0 0
chr8:144083057|144083440 hsa-miR-762 1 0 0
chr8:144083057|144083440 hsa-miR-1265 1 0 0
chr8:144083057|144083440 hsa-miR-1268a 1 0 0
chr8:144083057|144083440 hsa-miR-1469 1 0 0
chr8:144083057|144083440 hsa-miR-1470 0 1 0
chr8:144083057|144083440 hsa-miR-1538 0 1 0
chr8:144083057|144083440 hsa-miR-1825 1 0 0
chr8:144083057|144083440 hsa-miR-2278 0 1 0
chr8:144083057|144083440 hsa-miR-2861 1 0 0
chr8:144083057|144083440 hsa-miR-3141 1 0 0
chr8:144083057|144083440 hsa-miR-3183 0 1 0
chr8:144083057|144083440 hsa-miR-3196 1 0 0
chr8:144083057|144083440 hsa-miR-4270 1 0 0
chr8:144083057|144083440 hsa-miR-3621 1 1 0
chr8:144083057|144083440 hsa-miR-3909 0 1 0
chr8:144083057|144083440 hsa-miR-1268b 1 0 0
chr8:144083057|144083440 hsa-miR-4466 1 0 0
chr8:144083057|144083440 hsa-miR-4498 1 0 0
chr8:144083057|144083440 hsa-miR-4505 1 0 0
chr8:144083057|144083440 hsa-miR-4538 1 0 0
chr8:144083057|144083440 hsa-miR-3960 1 0 0
chr8:144083057|144083440 hsa-miR-4651 1 1 0
chr8:144083057|144083440 hsa-miR-4656 1 0 0
chr8:144083057|144083440 hsa-miR-4663 0 1 0
chr8:144083057|144083440 hsa-miR-4706 1 0 0
chr8:144083057|144083440 hsa-miR-4751 0 1 0
chr8:144083057|144083440 hsa-miR-4767 1 1 0
chr8:144083057|144083440 hsa-miR-5572 1 0 0
chr8:144083057|144083440 hsa-miR-5693 0 1 0
chr8:144083057|144083440 hsa-miR-6081 1 1 0
chr8:144083057|144083440 hsa-miR-6132 1 1 0
chr8:144083057|144083440 hsa-miR-6165 1 0 0
chr8:144083057|144083440 hsa-miR-6860 1 0 0
chr8:144083057|144083440 hsa-miR-7704 1 0 0
chr8:144083057|144083440 hsa-miR-9985 0 1 0
chr8:144083057|144083440 hsa-miR-12119 0 1 0
chr8:144083057|144083440 hsa-miR-4433b-3p 1 0 0
chr8:144083057|144083440 hsa-miR-93-3p 0 1 0
chr8:144083057|144083440 hsa-miR-6734-5p 1 0 0
chr8:144083057|144083440 hsa-miR-3194-3p 0 1 0
chr8:144083057|144083440 hsa-miR-6747-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6765-5p 1 0 0
chr8:144083057|144083440 hsa-miR-3150a-3p 0 1 0
chr8:144083057|144083440 hsa-miR-6894-5p 1 0 0
chr8:144083057|144083440 hsa-miR-25-5p 0 1 0
chr8:144083057|144083440 hsa-miR-1227-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6089 1 1 0
chr8:144083057|144083440 hsa-miR-6880-5p 0 1 0
chr8:144083057|144083440 hsa-miR-6890-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6820-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6727-5p 1 0 0
chr8:144083057|144083440 hsa-miR-197-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4728-3p 1 0 0
chr8:144083057|144083440 hsa-miR-7110-3p 0 1 0
chr8:144083057|144083440 hsa-miR-3180-3p 1 0 0
chr8:144083057|144083440 hsa-miR-6772-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6796-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6732-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6805-5p 1 0 0
chr8:144083057|144083440 hsa-miR-2467-5p 0 1 0
chr8:144083057|144083440 hsa-miR-6728-3p 0 1 0
chr8:144083057|144083440 hsa-miR-6774-3p 1 0 0
chr8:144083057|144083440 hsa-miR-6786-5p 1 0 0
chr8:144083057|144083440 hsa-miR-5088-5p 0 1 0
chr8:144083057|144083440 hsa-miR-3944-3p 1 0 0
chr8:144083057|144083440 hsa-miR-6753-5p 1 0 0
chr8:144083057|144083440 hsa-miR-1228-5p 1 1 0
chr8:144083057|144083440 hsa-miR-4690-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4732-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6717-5p 1 0 0
chr8:144083057|144083440 hsa-miR-3162-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6769a-3p 1 1 0
chr8:144083057|144083440 hsa-miR-6825-3p 1 1 0
chr8:144083057|144083440 hsa-miR-654-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6828-3p 0 1 0
chr8:144083057|144083440 hsa-miR-6887-3p 0 1 0
chr8:144083057|144083440 hsa-miR-744-5p 1 0 0
chr8:144083057|144083440 hsa-miR-2276-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4666a-5p 0 1 0
chr8:144083057|144083440 hsa-miR-4749-3p 1 1 0
chr8:144083057|144083440 hsa-miR-328-3p 1 0 0
chr8:144083057|144083440 hsa-miR-4750-3p 0 1 0
chr8:144083057|144083440 hsa-miR-371b-3p 1 0 0
chr8:144083057|144083440 hsa-miR-27a-3p 0 1 0
chr8:144083057|144083440 hsa-miR-4738-5p 0 1 0
chr8:144083057|144083440 hsa-miR-1207-5p 1 0 0
chr8:144083057|144083440 hsa-miR-1233-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4763-3p 1 0 0
chr8:144083057|144083440 hsa-miR-6812-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6816-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6775-5p 1 0 0
chr8:144083057|144083440 hsa-miR-1343-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6737-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6743-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6752-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6756-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6803-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6819-5p 1 0 0
chr8:144083057|144083440 hsa-miR-7107-5p 1 0 0
chr8:144083057|144083440 hsa-miR-7110-5p 1 0 0
chr8:144083057|144083440 hsa-miR-10401-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6722-3p 1 0 0
chr8:144083057|144083440 hsa-miR-6751-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6808-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6879-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4685-3p 0 1 0
chr8:144083057|144083440 hsa-miR-3620-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6836-5p 1 1 0
chr8:144083057|144083440 hsa-miR-10396a-5p 1 0 0
chr8:144083057|144083440 hsa-miR-1909-3p 1 0 0
chr8:144083057|144083440 hsa-miR-328-5p 1 0 0
chr8:144083057|144083440 hsa-miR-4632-5p 1 1 0
chr8:144083057|144083440 hsa-miR-4649-5p 1 1 0
chr8:144083057|144083440 hsa-miR-4685-5p 0 1 0
chr8:144083057|144083440 hsa-miR-4749-5p 0 1 0
chr8:144083057|144083440 hsa-miR-6729-5p 1 1 0
chr8:144083057|144083440 hsa-miR-675-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6777-5p 1 1 0
chr8:144083057|144083440 hsa-miR-6889-5p 1 1 0
chr8:144083057|144083440 hsa-miR-4758-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6731-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6736-5p 1 0 0
chr8:144083057|144083440 hsa-miR-6785-5p 1 0 0
chr8:144083057|144083440 hsa-miR-5591-5p 0 1 0
chr8:144083057|144083440 hsa-miR-10398-5p 0 1 0
chr8:144083057|144083440 hsa-miR-4757-5p 1 0 0
chr8:144083057|144083440 hsa-miR-10400-3p 0 1 0
chr8:144083057|144083440 hsa-miR-10394-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr8:144083057|144083440
ORF Type ORF1
Protein Length 86
Nucleotide Length 258
Protein Sequence MPLTPTSCGGRRSPGQKPGHGLRPQTAPPPWWSPWRSPTCKCAGSAAGKPAPRTRRCPPRSSARCERGRRGTGASAGPQTPTRGHN
Nucleotide Sequence CTGCCGCTCACCCCGACTTCTTGCGGTGGGCGGCGAAGTCCCGGGCAAAAGCCCGGGCACGGTCTCCGCCCGCAAACTGCTCCTCCACCATGGTGGAGCCCATGGCGTTCTCCGACATGTAAGTGCGCTGGGTCAGCGGCGGGAAAACCAGCGCCAAGAACCAGGCGATGCCCGCCACGTAGCTCAGCACGCTGTGAGAGAGGACGGAGGGGCACCGGAGCGTCAGCGGGTCCTCAGACGCCGACCCGAGGCCACAAC
CircID chr8:144083057|144083440
ORF Type ORF2
Protein Length 93
Nucleotide Length 279
Protein Sequence MLAPYALLCRSPRLLAVGGEVPGKSPGTVSARKLLLHHGGAHGVLRHVSALGQRRENQRQEPGDARHVAQHAVREDGGAPERQRVLRRRPEAT
Nucleotide Sequence CTGCTCGCCCCATACGCCCTGCTCTGCCGCTCACCCCGACTTCTTGCGGTGGGCGGCGAAGTCCCGGGCAAAAGCCCGGGCACGGTCTCCGCCCGCAAACTGCTCCTCCACCATGGTGGAGCCCATGGCGTTCTCCGACATGTAAGTGCGCTGGGTCAGCGGCGGGAAAACCAGCGCCAAGAACCAGGCGATGCCCGCCACGTAGCTCAGCACGCTGTGAGAGAGGACGGAGGGGCACCGGAGCGTCAGCGGGTCCTCAGACGCCGACCCGAGGCCACA
CircID chr8:144083057|144083440
ORF Type ORF3
Protein Length 33
Nucleotide Length 102
Protein Sequence MRWAAKSRAKARARSPPANCSSTMVEPMAFSDM
Nucleotide Sequence TTGCGGTGGGCGGCGAAGTCCCGGGCAAAAGCCCGGGCACGGTCTCCGCCCGCAAACTGCTCCTCCACCATGGTGGAGCCCATGGCGTTCTCCGACATGTAA
CircID chr8:144083057|144083440
ORF Type ORF4
Protein Length 35
Nucleotide Length 108
Protein Sequence MRAETVPGLLPGTSPPTARSRGERQSRAYGASSGG
Nucleotide Sequence TTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTTCGCCGCCCACCGCAAGAAGTCGGGGTGAGCGGCAGAGCAGGGCGTATGGGGCGAGCAGTGGTGGCTAA
CircID chr8:144083057|144083440
ORF Type ORF5
Protein Length 27
Nucleotide Length 81
Protein Sequence MLRGSLRVCRALPVAWLERTMRSVGLE
Nucleotide Sequence CTGCTCAGAGGCTCCCTTCGTGTCTGCAGGGCTCTGCCAGTGGCCTGGCTTGAACGGACGATGCGGTCAGTAGGGCTGGAG
CircID chr8:144083057|144083440
ORF Type ORF6
Protein Length 93
Nucleotide Length 282
Protein Sequence MVLGAGFPAADPAHLHVGERHGLHHGGGAVCGRRPCPGFCPGLRRPPQEVGVSGRAGRMGRAVVAKAGELCSEAPFVSAGLCQWPGLNGRCGQ
Nucleotide Sequence CTGGTTCTTGGCGCTGGTTTTCCCGCCGCTGACCCAGCGCACTTACATGTCGGAGAACGCCATGGGCTCCACCATGGTGGAGGAGCAGTTTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTTCGCCGCCCACCGCAAGAAGTCGGGGTGAGCGGCAGAGCAGGGCGTATGGGGCGAGCAGTGGTGGCTAAGGCCGGGGAGCTCTGCTCAGAGGCTCCCTTCGTGTCTGCAGGGCTCTGCCAGTGGCCTGGCTTGAACGGACGATGCGGTCAGTAG
CircID chr8:144083057|144083440
ORF Type ORF7
Protein Length 72
Nucleotide Length 219
Protein Sequence MTLRCPSVLSHSVLSYVAGIAWFLALVFPPLTQRTYMSENAMGSTMVEEQFAGGDRARAFARDFAAHRKKSG
Nucleotide Sequence CTGACGCTCCGGTGCCCCTCCGTCCTCTCTCACAGCGTGCTGAGCTACGTGGCGGGCATCGCCTGGTTCTTGGCGCTGGTTTTCCCGCCGCTGACCCAGCGCACTTACATGTCGGAGAACGCCATGGGCTCCACCATGGTGGAGGAGCAGTTTGCGGGCGGAGACCGTGCCCGGGCTTTTGCCCGGGACTTCGCCGCCCACCGCAAGAAGTCGGGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab