CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144264771|144265014
Strand +
CircType exon
Host Gene ENSG00000261236.4;
Algorism CIRI2;
Sequence GTGGGCTACGACCTGGATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGCTGGACCAGTTCCTGGACAAGATGGACGATCCTGACTACTGGTGAGGGCTGGTGGGGTGGGGCCAGCAGCCGGGGTGGGCCCGAGGGGTGGGGCAGGGCTGGCGGGGTCTGACTGGCGGTCTCCAGGCGCACCGTGCAGGACCCGATGACAGGGCGGGACCTGAGACTGACGGATGAGCAGGTGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144264771|144265014 hsa-miR-198 0 0 1
chr8:144264771|144265014 hsa-miR-622 0 0 1
chr8:144264771|144265014 hsa-miR-665 0 0 1
chr8:144264771|144265014 hsa-miR-873-5p 0 0 1
chr8:144264771|144265014 hsa-miR-873-3p 0 0 1
chr8:144264771|144265014 hsa-miR-1226-5p 0 0 1
chr8:144264771|144265014 hsa-miR-1226-3p 0 0 1
chr8:144264771|144265014 hsa-miR-1266-5p 0 0 1
chr8:144264771|144265014 hsa-miR-1266-3p 0 0 1
chr8:144264771|144265014 hsa-miR-146b-3p 0 0 1
chr8:144264771|144265014 hsa-miR-339-5p 1 0 1
chr8:144264771|144265014 hsa-miR-767-3p 0 0 1
chr8:144264771|144265014 hsa-miR-199b-3p 0 0 1
chr8:144264771|144265014 hsa-miR-199a-3p 0 0 1
chr8:144264771|144265014 hsa-miR-324-3p 0 0 1
chr8:144264771|144265014 hsa-miR-582-3p 0 0 1
chr8:144264771|144265014 hsa-miR-1254 0 0 1
chr8:144264771|144265014 hsa-miR-346 1 0 0
chr8:144264771|144265014 hsa-miR-596 1 0 0
chr8:144264771|144265014 hsa-miR-1913 1 0 0
chr8:144264771|144265014 hsa-miR-4258 1 0 0
chr8:144264771|144265014 hsa-miR-4449 1 0 0
chr8:144264771|144265014 hsa-miR-3972 1 0 0
chr8:144264771|144265014 hsa-miR-6084 1 0 0
chr8:144264771|144265014 hsa-miR-6749-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6879-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4665-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6836-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6720-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6892-3p 1 0 0
chr8:144264771|144265014 hsa-miR-139-3p 1 0 0
chr8:144264771|144265014 hsa-miR-874-5p 1 0 0
chr8:144264771|144265014 hsa-miR-3189-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6726-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1915-5p 1 0 0
chr8:144264771|144265014 hsa-miR-4725-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6765-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6882-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6858-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1343-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4763-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6763-3p 1 0 0
chr8:144264771|144265014 hsa-miR-7108-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1247-5p 1 0 0
chr8:144264771|144265014 hsa-miR-3944-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1908-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4638-3p 1 0 0
chr8:144264771|144265014 hsa-miR-3190-5p 1 0 0
chr8:144264771|144265014 hsa-miR-4758-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4746-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1296-5p 1 0 0
chr8:144264771|144265014 hsa-miR-1914-5p 1 0 0
chr8:144264771|144265014 hsa-miR-4749-3p 1 0 0
chr8:144264771|144265014 hsa-miR-2277-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6802-3p 1 0 0
chr8:144264771|144265014 hsa-miR-3620-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4433a-5p 1 0 0
chr8:144264771|144265014 hsa-miR-4750-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6779-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4433b-5p 1 0 0
chr8:144264771|144265014 hsa-miR-6729-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6850-3p 1 0 0
chr8:144264771|144265014 hsa-miR-3162-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4763-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6722-3p 1 0 0
chr8:144264771|144265014 hsa-miR-1909-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6848-5p 1 0 0
chr8:144264771|144265014 hsa-miR-10396a-3p 1 0 0
chr8:144264771|144265014 hsa-miR-10396b-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6799-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4722-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6727-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6784-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6862-3p 1 0 0
chr8:144264771|144265014 hsa-miR-10401-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6805-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6775-3p 1 0 0
chr8:144264771|144265014 hsa-miR-10392-3p 1 0 0
chr8:144264771|144265014 hsa-miR-7114-3p 1 0 0
chr8:144264771|144265014 hsa-miR-3085-3p 1 0 0
chr8:144264771|144265014 hsa-miR-4769-3p 1 0 0
chr8:144264771|144265014 hsa-miR-6834-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:144264771|144265014
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MDGRRIYKPLRTRDELDQFLDKMDDPDYW
Nucleotide Sequence CTGGATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGCTGGACCAGTTCCTGGACAAGATGGACGATCCTGACTACTGGTGA
CircID chr8:144264771|144265014
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MVGWGQQPGWARGVGQGWRGLTGGLQAHRAGPDDRAGPETDG
Nucleotide Sequence CTGGTGGGGTGGGGCCAGCAGCCGGGGTGGGCCCGAGGGGTGGGGCAGGGCTGGCGGGGTCTGACTGGCGGTCTCCAGGCGCACCGTGCAGGACCCGATGACAGGGCGGGACCTGAGACTGACGGATGA
CircID chr8:144264771|144265014
ORF Type ORF3
Protein Length 50
Nucleotide Length 153
Protein Sequence MAGASTSPCGPGMSWTSSWTRWTILTTGEGWWGGASSRGGPEGWGRAGGV
Nucleotide Sequence ATGGCAGGCGCATCTACAAGCCCCTGCGGACCCGGGATGAGCTGGACCAGTTCCTGGACAAGATGGACGATCCTGACTACTGGTGAGGGCTGGTGGGGTGGGGCCAGCAGCCGGGGTGGGCCCGAGGGGTGGGGCAGGGCTGGCGGGGTCTGA
CircID chr8:144264771|144265014
ORF Type ORF4
Protein Length 25
Nucleotide Length 75
Protein Sequence MAVSRRTVQDPMTGRDLRLTDEQVA
Nucleotide Sequence CTGGCGGTCTCCAGGCGCACCGTGCAGGACCCGATGACAGGGCGGGACCTGAGACTGACGGATGAGCAGGTGGCC
CircID chr8:144264771|144265014
ORF Type ORF5
Protein Length 36
Nucleotide Length 111
Protein Sequence MVRAGGVGPAAGVGPRGGAGLAGSDWRSPGAPCRTR
Nucleotide Sequence CTGGTGAGGGCTGGTGGGGTGGGGCCAGCAGCCGGGGTGGGCCCGAGGGGTGGGGCAGGGCTGGCGGGGTCTGACTGGCGGTCTCCAGGCGCACCGTGCAGGACCCGATGA
CircID chr8:144264771|144265014
ORF Type ORF6
Protein Length 79
Nucleotide Length 237
Protein Sequence MLIRQSQVPPCHRVLHGAPGDRQSDPASPAPPLGPTPAAGPTPPALTSSQDRPSCPGTGPAHPGSAGACRCACHPGRSP
Nucleotide Sequence CTGCTCATCCGTCAGTCTCAGGTCCCGCCCTGTCATCGGGTCCTGCACGGTGCGCCTGGAGACCGCCAGTCAGACCCCGCCAGCCCTGCCCCACCCCTCGGGCCCACCCCGGCTGCTGGCCCCACCCCACCAGCCCTCACCAGTAGTCAGGATCGTCCATCTTGTCCAGGAACTGGTCCAGCTCATCCCGGGTCCGCAGGGGCTTGTAGATGCGCCTGCCATCCAGGTCGTAGCCCA
CircID chr8:144264771|144265014
ORF Type ORF7
Protein Length 61
Nucleotide Length 183
Protein Sequence METASQTPPALPHPSGPPRLLAPPHQPSPVVRIVHLVQELVQLIPGPQGLVDAPAIQVVAH
Nucleotide Sequence CTGGAGACCGCCAGTCAGACCCCGCCAGCCCTGCCCCACCCCTCGGGCCCACCCCGGCTGCTGGCCCCACCCCACCAGCCCTCACCAGTAGTCAGGATCGTCCATCTTGTCCAGGAACTGGTCCAGCTCATCCCGGGTCCGCAGGGGCTTGTAGATGCGCCTGCCATCCAGGTCGTAGCCCAC
CircID chr8:144264771|144265014
ORF Type ORF8
Protein Length 38
Nucleotide Length 117
Protein Sequence MSSGPARCAWRPPVRPRQPCPTPRAHPGCWPHPTSPHQ
Nucleotide Sequence CTGTCATCGGGTCCTGCACGGTGCGCCTGGAGACCGCCAGTCAGACCCCGCCAGCCCTGCCCCACCCCTCGGGCCCACCCCGGCTGCTGGCCCCACCCCACCAGCCCTCACCAGTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab