CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144308797|144308953
Strand +
CircType exon
Host Gene ENSG00000185122.9;
Algorism CIRI2;
Sequence CTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTGTTCCCGCTCTGAAAGGGAGACACATGGGTGGGTCACGCGTGGTGGTGAGGGGCAGCGTGCCCAAGCCGCCCCTTCCCCAGGCCGCCCCTTCTGAAACGCAGGCAGTGCACGTTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144308797|144308953 hsa-miR-197-5p 0 0 1
chr8:144308797|144308953 hsa-miR-197-3p 0 0 1
chr8:144308797|144308953 hsa-miR-204-5p 0 0 1
chr8:144308797|144308953 hsa-miR-204-3p 0 0 1
chr8:144308797|144308953 hsa-miR-211-5p 0 0 1
chr8:144308797|144308953 hsa-miR-211-3p 0 0 1
chr8:144308797|144308953 hsa-miR-635 0 1 1
chr8:144308797|144308953 hsa-miR-661 1 0 1
chr8:144308797|144308953 hsa-miR-1234-3p 0 0 1
chr8:144308797|144308953 hsa-miR-1234 0 0 1
chr8:144308797|144308953 hsa-miR-324-3p 0 0 1
chr8:144308797|144308953 hsa-miR-220b 0 0 1
chr8:144308797|144308953 hsa-miR-551a 0 1 0
chr8:144308797|144308953 hsa-miR-608 1 1 0
chr8:144308797|144308953 hsa-miR-637 1 0 0
chr8:144308797|144308953 hsa-miR-762 1 0 0
chr8:144308797|144308953 hsa-miR-1913 0 1 0
chr8:144308797|144308953 hsa-miR-2110 0 1 0
chr8:144308797|144308953 hsa-miR-2861 1 0 0
chr8:144308797|144308953 hsa-miR-3154 0 1 0
chr8:144308797|144308953 hsa-miR-3196 1 1 0
chr8:144308797|144308953 hsa-miR-4741 1 0 0
chr8:144308797|144308953 hsa-miR-6069 1 1 0
chr8:144308797|144308953 hsa-miR-8089 1 1 0
chr8:144308797|144308953 hsa-miR-10226 0 1 0
chr8:144308797|144308953 hsa-miR-12119 1 0 0
chr8:144308797|144308953 hsa-miR-223-3p 0 1 0
chr8:144308797|144308953 hsa-miR-6799-5p 1 0 0
chr8:144308797|144308953 hsa-miR-3180-3p 0 1 0
chr8:144308797|144308953 hsa-miR-6805-5p 1 1 0
chr8:144308797|144308953 hsa-miR-6798-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6782-5p 1 0 0
chr8:144308797|144308953 hsa-miR-149-3p 1 0 0
chr8:144308797|144308953 hsa-miR-6789-5p 1 1 0
chr8:144308797|144308953 hsa-miR-1180-5p 1 1 0
chr8:144308797|144308953 hsa-miR-4749-3p 0 1 0
chr8:144308797|144308953 hsa-miR-1229-3p 0 1 0
chr8:144308797|144308953 hsa-miR-4750-3p 1 0 0
chr8:144308797|144308953 hsa-miR-3179 0 1 0
chr8:144308797|144308953 hsa-miR-10400-5p 1 0 0
chr8:144308797|144308953 hsa-miR-4763-3p 1 0 0
chr8:144308797|144308953 hsa-miR-6816-5p 1 1 0
chr8:144308797|144308953 hsa-miR-3180 0 1 0
chr8:144308797|144308953 hsa-miR-6803-5p 1 0 0
chr8:144308797|144308953 hsa-miR-7107-5p 1 1 0
chr8:144308797|144308953 hsa-miR-6763-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6774-5p 0 1 0
chr8:144308797|144308953 hsa-miR-6779-5p 1 0 0
chr8:144308797|144308953 hsa-miR-4685-3p 0 1 0
chr8:144308797|144308953 hsa-miR-4728-5p 1 0 0
chr8:144308797|144308953 hsa-miR-5196-5p 1 1 0
chr8:144308797|144308953 hsa-miR-6780b-5p 1 1 0
chr8:144308797|144308953 hsa-miR-1237-5p 1 0 0
chr8:144308797|144308953 hsa-miR-4649-5p 1 0 0
chr8:144308797|144308953 hsa-miR-4685-5p 0 1 0
chr8:144308797|144308953 hsa-miR-4725-3p 0 1 0
chr8:144308797|144308953 hsa-miR-4749-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6729-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6858-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6883-5p 1 1 0
chr8:144308797|144308953 hsa-miR-4758-5p 1 0 0
chr8:144308797|144308953 hsa-miR-4700-5p 0 1 0
chr8:144308797|144308953 hsa-miR-4747-5p 1 1 0
chr8:144308797|144308953 hsa-miR-6750-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6791-5p 1 0 0
chr8:144308797|144308953 hsa-miR-6511a-3p 0 1 0
chr8:144308797|144308953 hsa-miR-6837-5p 1 1 0
chr8:144308797|144308953 hsa-miR-6511b-3p 0 1 0
chr8:144308797|144308953 hsa-miR-7114-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:144308797|144308953
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MALVEHVEAVPALKGRHMGGSRVVVRGSVPKPPLPQAAPSETQAVHVP
Nucleotide Sequence CTGGCCCTGGTCGAACACGTGGAAGCTGTTCCCGCTCTGAAAGGGAGACACATGGGTGGGTCACGCGTGGTGGTGAGGGGCAGCGTGCCCAAGCCGCCCCTTCCCCAGGCCGCCCCTTCTGAAACGCAGGCAGTGCACGTTCCA

CircID chr8:144308797|144308953
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MPAFQKGRPGEGAAWARCPSPPRVTHPCVSLSEREQLPRVRPGPVCQG
Nucleotide Sequence CTGCCTGCGTTTCAGAAGGGGCGGCCTGGGGAAGGGGCGGCTTGGGCACGCTGCCCCTCACCACCACGCGTGACCCACCCATGTGTCTCCCTTTCAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGA

CircID chr8:144308797|144308953
ORF Type ORF3
Protein Length 34
Nucleotide Length 102
Protein Sequence MGTLPLTTTRDPPMCLPFRAGTASTCSTRASLPR
Nucleotide Sequence TTGGGCACGCTGCCCCTCACCACCACGCGTGACCCACCCATGTGTCTCCCTTTCAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites