CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144356415|144356680
Strand -
CircType exon
Host Gene ENSG00000182325.9;
Algorism CIRI2;
Sequence AAAGTTGCAGGTTGAGCTCGCCAGGCAGAGCTCCTCTAGGCTAGGGAAGCCTGGTCCGGGAGCCACCCCTCGTCCCGGAGGCTTGGGCAGCCACATCAGGTTCAACAGCCGCAGCACCTGGGGGCAAGGTCCAGGCTGTAGATGGGGGAGGGTGTGACAGGTGGGAGAGGCAGGGCGCCAGGTACCTGGAGCTGAGGGCAGCCTTTCTGCAGAGCCTCGACAGGCAGCTGAAGGGGAATGCTATTACGGTTGATGCCGGTGCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144356415|144356680 hsa-miR-22-5p 0 0 1
chr8:144356415|144356680 hsa-miR-22-3p 0 0 1
chr8:144356415|144356680 hsa-miR-150-5p 0 0 1
chr8:144356415|144356680 hsa-miR-150-3p 0 0 1
chr8:144356415|144356680 hsa-miR-492 0 0 1
chr8:144356415|144356680 hsa-miR-604 0 0 1
chr8:144356415|144356680 hsa-miR-608 0 1 1
chr8:144356415|144356680 hsa-miR-619-5p 0 0 1
chr8:144356415|144356680 hsa-miR-619-3p 0 0 1
chr8:144356415|144356680 hsa-miR-647 0 1 1
chr8:144356415|144356680 hsa-miR-661 1 0 1
chr8:144356415|144356680 hsa-miR-653-5p 0 0 1
chr8:144356415|144356680 hsa-miR-653-3p 0 0 1
chr8:144356415|144356680 hsa-miR-298 0 0 1
chr8:144356415|144356680 hsa-miR-891b 0 0 1
chr8:144356415|144356680 hsa-miR-708-5p 0 0 1
chr8:144356415|144356680 hsa-miR-708-3p 0 0 1
chr8:144356415|144356680 hsa-miR-877-5p 0 0 1
chr8:144356415|144356680 hsa-miR-877-3p 0 0 1
chr8:144356415|144356680 hsa-miR-760 0 0 1
chr8:144356415|144356680 hsa-miR-1179 0 0 1
chr8:144356415|144356680 hsa-miR-1228-5p 0 0 1
chr8:144356415|144356680 hsa-miR-1228-3p 0 0 1
chr8:144356415|144356680 hsa-miR-1205 0 0 1
chr8:144356415|144356680 hsa-miR-1267 0 0 1
chr8:144356415|144356680 hsa-miR-139-5p 0 0 1
chr8:144356415|144356680 hsa-miR-532-3p 0 0 1
chr8:144356415|144356680 hsa-miR-1184 0 0 1
chr8:144356415|144356680 hsa-miR-566 0 0 1
chr8:144356415|144356680 hsa-miR-361-3p 0 1 1
chr8:144356415|144356680 hsa-miR-1224-3p 1 1 1
chr8:144356415|144356680 hsa-miR-28-5p 0 0 1
chr8:144356415|144356680 hsa-miR-1207-3p 0 0 1
chr8:144356415|144356680 hsa-miR-1260 0 0 1
chr8:144356415|144356680 hsa-miR-1280 0 0 1
chr8:144356415|144356680 hsa-miR-1254 0 0 1
chr8:144356415|144356680 hsa-miR-220a 0 0 1
chr8:144356415|144356680 hsa-miR-764 0 1 0
chr8:144356415|144356680 hsa-miR-1260a 0 1 0
chr8:144356415|144356680 hsa-miR-1260b 0 1 0
chr8:144356415|144356680 hsa-miR-3665 1 0 0
chr8:144356415|144356680 hsa-miR-4497 0 1 0
chr8:144356415|144356680 hsa-miR-6072 0 1 0
chr8:144356415|144356680 hsa-miR-11400 0 1 0
chr8:144356415|144356680 hsa-miR-12125 0 1 0
chr8:144356415|144356680 hsa-miR-214-5p 0 1 0
chr8:144356415|144356680 hsa-miR-18a-3p 0 1 0
chr8:144356415|144356680 hsa-miR-3194-3p 1 1 0
chr8:144356415|144356680 hsa-miR-6747-3p 0 1 0
chr8:144356415|144356680 hsa-miR-6836-3p 1 0 0
chr8:144356415|144356680 hsa-miR-4687-3p 0 1 0
chr8:144356415|144356680 hsa-miR-1233-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6892-3p 1 1 0
chr8:144356415|144356680 hsa-miR-4474-3p 0 1 0
chr8:144356415|144356680 hsa-miR-3189-5p 0 1 0
chr8:144356415|144356680 hsa-miR-7110-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6726-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6787-3p 1 0 0
chr8:144356415|144356680 hsa-miR-1915-5p 1 1 0
chr8:144356415|144356680 hsa-miR-6845-3p 1 1 0
chr8:144356415|144356680 hsa-miR-2467-5p 0 1 0
chr8:144356415|144356680 hsa-miR-6882-3p 1 1 0
chr8:144356415|144356680 hsa-miR-4713-5p 1 1 0
chr8:144356415|144356680 hsa-miR-6815-3p 1 0 0
chr8:144356415|144356680 hsa-miR-939-3p 0 1 0
chr8:144356415|144356680 hsa-miR-4763-5p 0 1 0
chr8:144356415|144356680 hsa-miR-7108-3p 1 0 0
chr8:144356415|144356680 hsa-miR-4787-5p 1 0 0
chr8:144356415|144356680 hsa-miR-3158-5p 0 1 0
chr8:144356415|144356680 hsa-miR-1236-3p 0 1 0
chr8:144356415|144356680 hsa-miR-1911-3p 0 1 0
chr8:144356415|144356680 hsa-miR-4772-3p 0 1 0
chr8:144356415|144356680 hsa-miR-6752-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6865-3p 0 1 0
chr8:144356415|144356680 hsa-miR-6773-3p 0 1 0
chr8:144356415|144356680 hsa-miR-4749-3p 1 0 0
chr8:144356415|144356680 hsa-miR-520g-5p 0 1 0
chr8:144356415|144356680 hsa-miR-3620-3p 1 0 0
chr8:144356415|144356680 hsa-miR-1229-3p 1 0 0
chr8:144356415|144356680 hsa-miR-3173-5p 1 1 0
chr8:144356415|144356680 hsa-miR-6779-3p 0 1 0
chr8:144356415|144356680 hsa-miR-4433b-5p 1 0 0
chr8:144356415|144356680 hsa-miR-6789-3p 1 1 0
chr8:144356415|144356680 hsa-miR-3200-3p 0 1 0
chr8:144356415|144356680 hsa-miR-6800-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6803-5p 1 0 0
chr8:144356415|144356680 hsa-miR-6819-5p 1 0 0
chr8:144356415|144356680 hsa-miR-3127-3p 0 1 0
chr8:144356415|144356680 hsa-miR-4755-5p 1 1 0
chr8:144356415|144356680 hsa-miR-4649-5p 1 1 0
chr8:144356415|144356680 hsa-miR-6799-3p 1 0 0
chr8:144356415|144356680 hsa-miR-1914-3p 0 1 0
chr8:144356415|144356680 hsa-miR-2682-3p 1 0 0
chr8:144356415|144356680 hsa-miR-4722-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6756-3p 0 1 0
chr8:144356415|144356680 hsa-miR-6862-3p 1 0 0
chr8:144356415|144356680 hsa-miR-4723-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6744-3p 1 0 0
chr8:144356415|144356680 hsa-miR-6781-3p 1 0 0
chr8:144356415|144356680 hsa-miR-4769-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:144356415|144356680
ORF Type ORF1
Protein Length 50
Nucleotide Length 153
Protein Sequence MQVELARQSSSRLGKPGPGATPRPGGLGSHIRFNSRSTWGQGPGCRWGRV
Nucleotide Sequence TTGCAGGTTGAGCTCGCCAGGCAGAGCTCCTCTAGGCTAGGGAAGCCTGGTCCGGGAGCCACCCCTCGTCCCGGAGGCTTGGGCAGCCACATCAGGTTCAACAGCCGCAGCACCTGGGGGCAAGGTCCAGGCTGTAGATGGGGGAGGGTGTGA
CircID chr8:144356415|144356680
ORF Type ORF2
Protein Length 72
Nucleotide Length 216
Protein Sequence MVREPPLVPEAWAATSGSTAAAPGGKVQAVDGGGCDRWERQGARYLELRAAFLQSLDRQLKGNAITVDAGAH
Nucleotide Sequence CTGGTCCGGGAGCCACCCCTCGTCCCGGAGGCTTGGGCAGCCACATCAGGTTCAACAGCCGCAGCACCTGGGGGCAAGGTCCAGGCTGTAGATGGGGGAGGGTGTGACAGGTGGGAGAGGCAGGGCGCCAGGTACCTGGAGCTGAGGGCAGCCTTTCTGCAGAGCCTCGACAGGCAGCTGAAGGGGAATGCTATTACGGTTGATGCCGGTGCTCAC
CircID chr8:144356415|144356680
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MPVEALQKGCPQLQVPGALPLPPVTPSPIYSLDLAPRCCGC
Nucleotide Sequence CTGCCTGTCGAGGCTCTGCAGAAAGGCTGCCCTCAGCTCCAGGTACCTGGCGCCCTGCCTCTCCCACCTGTCACACCCTCCCCCATCTACAGCCTGGACCTTGCCCCCAGGTGCTGCGGCTGTTGA
CircID chr8:144356415|144356680
ORF Type ORF4
Protein Length 60
Nucleotide Length 183
Protein Sequence MSRLCRKAALSSRYLAPCLSHLSHPPPSTAWTLPPGAAAVEPDVAAQASGTRGGSRTRLP
Nucleotide Sequence CTGTCGAGGCTCTGCAGAAAGGCTGCCCTCAGCTCCAGGTACCTGGCGCCCTGCCTCTCCCACCTGTCACACCCTCCCCCATCTACAGCCTGGACCTTGCCCCCAGGTGCTGCGGCTGTTGAACCTGATGTGGCTGCCCAAGCCTCCGGGACGAGGGGTGGCTCCCGGACCAGGCTTCCCTAG
CircID chr8:144356415|144356680
ORF Type ORF5
Protein Length 67
Nucleotide Length 201
Protein Sequence MPSAPGTWRPASPTCHTLPHLQPGPCPQVLRLLNLMWLPKPPGRGVAPGPGFPSLEELCLASSTCNF
Nucleotide Sequence CTGCCCTCAGCTCCAGGTACCTGGCGCCCTGCCTCTCCCACCTGTCACACCCTCCCCCATCTACAGCCTGGACCTTGCCCCCAGGTGCTGCGGCTGTTGAACCTGATGTGGCTGCCCAAGCCTCCGGGACGAGGGGTGGCTCCCGGACCAGGCTTCCCTAGCCTAGAGGAGCTCTGCCTGGCGAGCTCAACCTGCAACTTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab