CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144359748|144359969
Strand +
CircType exon
Host Gene ENSG00000185803.7;
Algorism CIRI2;
Sequence GCAGGGCAGCAGGGCACTCAGGCCTTGACCCAGGAAGAATGACCGTAAGAAGCGAGGTGGCAGGTGGCTCAAGAAGGGCAGGAAAGTGACATTCGAGGCACAGCATGCCAGTGCCAGCACAAAGGCCAGTGCTAAGAAGGCCACAGAATGCAACTGTCCTGCCACTGGGGCCACATGGTGCCACAGAGAGGCCAGCAGGGCTGTGCCCACCATGCCCAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144359748|144359969 hsa-miR-33a-5p 0 0 1
chr8:144359748|144359969 hsa-miR-33a-3p 0 0 1
chr8:144359748|144359969 hsa-miR-370-5p 0 0 1
chr8:144359748|144359969 hsa-miR-370-3p 0 0 1
chr8:144359748|144359969 hsa-miR-193b-5p 0 0 1
chr8:144359748|144359969 hsa-miR-193b-3p 0 0 1
chr8:144359748|144359969 hsa-miR-526b-5p 0 0 1
chr8:144359748|144359969 hsa-miR-526b-3p 0 0 1
chr8:144359748|144359969 hsa-miR-612 0 0 1
chr8:144359748|144359969 hsa-miR-33b-5p 0 0 1
chr8:144359748|144359969 hsa-miR-33b-3p 0 0 1
chr8:144359748|144359969 hsa-miR-668-5p 0 0 1
chr8:144359748|144359969 hsa-miR-668-3p 0 0 1
chr8:144359748|144359969 hsa-miR-874-5p 0 0 1
chr8:144359748|144359969 hsa-miR-874-3p 0 0 1
chr8:144359748|144359969 hsa-miR-541-5p 0 0 1
chr8:144359748|144359969 hsa-miR-541-3p 0 0 1
chr8:144359748|144359969 hsa-miR-938 0 0 1
chr8:144359748|144359969 hsa-miR-663b 1 0 1
chr8:144359748|144359969 hsa-miR-1286 0 0 1
chr8:144359748|144359969 hsa-miR-1248 0 1 1
chr8:144359748|144359969 hsa-miR-767-5p 0 1 1
chr8:144359748|144359969 hsa-miR-146b-3p 0 0 1
chr8:144359748|144359969 hsa-miR-654-5p 0 0 1
chr8:144359748|144359969 hsa-miR-1207-5p 0 0 1
chr8:144359748|144359969 hsa-miR-193a-3p 0 0 1
chr8:144359748|144359969 hsa-miR-550 0 0 1
chr8:144359748|144359969 hsa-miR-1285 0 0 1
chr8:144359748|144359969 hsa-miR-218 0 0 1
chr8:144359748|144359969 hsa-miR-346 1 0 0
chr8:144359748|144359969 hsa-miR-644a 0 1 0
chr8:144359748|144359969 hsa-miR-661 1 1 0
chr8:144359748|144359969 hsa-miR-2113 0 1 0
chr8:144359748|144359969 hsa-miR-1200 1 0 0
chr8:144359748|144359969 hsa-miR-1913 1 0 0
chr8:144359748|144359969 hsa-miR-1976 1 1 0
chr8:144359748|144359969 hsa-miR-4265 0 1 0
chr8:144359748|144359969 hsa-miR-4642 1 0 0
chr8:144359748|144359969 hsa-miR-6860 0 1 0
chr8:144359748|144359969 hsa-miR-138-5p 1 0 0
chr8:144359748|144359969 hsa-miR-29b-1-5p 1 0 0
chr8:144359748|144359969 hsa-miR-18a-3p 0 1 0
chr8:144359748|144359969 hsa-miR-3194-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6720-5p 1 0 0
chr8:144359748|144359969 hsa-miR-3692-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6875-3p 0 1 0
chr8:144359748|144359969 hsa-miR-3622b-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6817-3p 0 1 0
chr8:144359748|144359969 hsa-miR-7108-5p 1 1 0
chr8:144359748|144359969 hsa-miR-6765-3p 1 0 0
chr8:144359748|144359969 hsa-miR-6815-3p 1 0 0
chr8:144359748|144359969 hsa-miR-4763-5p 1 0 0
chr8:144359748|144359969 hsa-miR-1909-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6757-3p 0 1 0
chr8:144359748|144359969 hsa-miR-339-5p 1 0 0
chr8:144359748|144359969 hsa-miR-3922-5p 0 1 0
chr8:144359748|144359969 hsa-miR-1225-5p 0 1 0
chr8:144359748|144359969 hsa-miR-5000-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6895-3p 1 0 0
chr8:144359748|144359969 hsa-miR-3074-5p 0 1 0
chr8:144359748|144359969 hsa-miR-891a-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6856-3p 1 1 0
chr8:144359748|144359969 hsa-miR-6886-3p 1 1 0
chr8:144359748|144359969 hsa-miR-6773-3p 1 1 0
chr8:144359748|144359969 hsa-miR-1285-5p 1 0 0
chr8:144359748|144359969 hsa-miR-3124-3p 0 1 0
chr8:144359748|144359969 hsa-miR-3173-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6779-3p 0 1 0
chr8:144359748|144359969 hsa-miR-96-5p 0 1 0
chr8:144359748|144359969 hsa-miR-4763-3p 1 0 0
chr8:144359748|144359969 hsa-miR-6775-5p 1 0 0
chr8:144359748|144359969 hsa-miR-6836-5p 1 0 0
chr8:144359748|144359969 hsa-miR-6862-5p 0 1 0
chr8:144359748|144359969 hsa-miR-10392-5p 1 0 0
chr8:144359748|144359969 hsa-miR-3187-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6799-3p 0 1 0
chr8:144359748|144359969 hsa-miR-4722-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6727-3p 1 1 0
chr8:144359748|144359969 hsa-miR-6893-3p 0 1 0
chr8:144359748|144359969 hsa-miR-4757-5p 0 1 0
chr8:144359748|144359969 hsa-miR-6805-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6775-3p 1 0 0
chr8:144359748|144359969 hsa-miR-6529-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6769b-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6744-3p 0 1 0
chr8:144359748|144359969 hsa-miR-6848-3p 1 0 0
chr8:144359748|144359969 hsa-miR-6781-3p 1 0 0
chr8:144359748|144359969 hsa-miR-4690-3p 1 0 0
chr8:144359748|144359969 hsa-miR-3922-3p 0 1 0
chr8:144359748|144359969 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:144359748|144359969
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MQLSCHWGHMVPQRGQQGCAHHAQH
Nucleotide Sequence ATGCAACTGTCCTGCCACTGGGGCCACATGGTGCCACAGAGAGGCCAGCAGGGCTGTGCCCACCATGCCCAGCAC

CircID chr8:144359748|144359969
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MPVPAQRPVLRRPQNATVLPLGPHGATERPAGLCPPCPA
Nucleotide Sequence ATGCCAGTGCCAGCACAAAGGCCAGTGCTAAGAAGGCCACAGAATGCAACTGTCCTGCCACTGGGGCCACATGGTGCCACAGAGAGGCCAGCAGGGCTGTGCCCACCATGCCCAGCA

CircID chr8:144359748|144359969
ORF Type ORF3
Protein Length 73
Nucleotide Length 219
Protein Sequence MGMVGTALLASLWHHVAPVAGQLHSVAFLALAFVLALACCASNVTFLPFLSHLPPRFLRSFFLGQGLSALLPC
Nucleotide Sequence CTGGGCATGGTGGGCACAGCCCTGCTGGCCTCTCTGTGGCACCATGTGGCCCCAGTGGCAGGACAGTTGCATTCTGTGGCCTTCTTAGCACTGGCCTTTGTGCTGGCACTGGCATGCTGTGCCTCGAATGTCACTTTCCTGCCCTTCTTGAGCCACCTGCCACCTCGCTTCTTACGGTCATTCTTCCTGGGTCAAGGCCTGAGTGCCCTGCTGCCCTGC

CircID chr8:144359748|144359969
ORF Type ORF4
Protein Length 35
Nucleotide Length 105
Protein Sequence MLCLECHFPALLEPPATSLLTVILPGSRPECPAAL
Nucleotide Sequence ATGCTGTGCCTCGAATGTCACTTTCCTGCCCTTCTTGAGCCACCTGCCACCTCGCTTCTTACGGTCATTCTTCCTGGGTCAAGGCCTGAGTGCCCTGCTGCCCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites