CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144360408|144360644
Strand -
CircType exon
Host Gene ENSG00000185803.7;
Algorism CIRI2;
Sequence GGGCGTCTGGCCTACCACCTGGCTGTGGTGCTGGGCAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGGTACACAAGGACCCCCAGCCCCTGTGCGGGTGGAACTCAGGGCTAGGAGCCAGGTCCTGGCGCAGTCAGCCCTGACATTCTGCTCGCTCACTGCAGGTCCTTGGCAGGGCTGGGCGGCCTCTCTCTGCTGGGCGTGTTCTGTGGGGGCTAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144360408|144360644 hsa-miR-29a-5p 0 0 1
chr8:144360408|144360644 hsa-miR-29a-3p 0 0 1
chr8:144360408|144360644 hsa-miR-149-5p 0 0 1
chr8:144360408|144360644 hsa-miR-149-3p 0 0 1
chr8:144360408|144360644 hsa-miR-29c-5p 0 0 1
chr8:144360408|144360644 hsa-miR-29c-3p 0 0 1
chr8:144360408|144360644 hsa-miR-492 0 1 1
chr8:144360408|144360644 hsa-miR-581 0 1 1
chr8:144360408|144360644 hsa-miR-631 0 1 1
chr8:144360408|144360644 hsa-miR-637 0 1 1
chr8:144360408|144360644 hsa-miR-922 0 1 1
chr8:144360408|144360644 hsa-miR-615-5p 0 1 1
chr8:144360408|144360644 hsa-miR-885-3p 0 0 1
chr8:144360408|144360644 hsa-miR-140-3p 0 0 1
chr8:144360408|144360644 hsa-miR-125a-5p 0 0 1
chr8:144360408|144360644 hsa-miR-125b 0 0 1
chr8:144360408|144360644 hsa-miR-220c 0 0 1
chr8:144360408|144360644 hsa-miR-129-3p 0 0 1
chr8:144360408|144360644 hsa-miR-29b 0 0 1
chr8:144360408|144360644 hsa-miR-107 0 1 0
chr8:144360408|144360644 hsa-miR-762 1 1 0
chr8:144360408|144360644 hsa-miR-892b 0 1 0
chr8:144360408|144360644 hsa-miR-921 0 1 0
chr8:144360408|144360644 hsa-miR-936 0 1 0
chr8:144360408|144360644 hsa-miR-1291 0 1 0
chr8:144360408|144360644 hsa-miR-4313 1 0 0
chr8:144360408|144360644 hsa-miR-3921 0 1 0
chr8:144360408|144360644 hsa-miR-3943 1 0 0
chr8:144360408|144360644 hsa-miR-4450 0 1 0
chr8:144360408|144360644 hsa-miR-4498 0 1 0
chr8:144360408|144360644 hsa-miR-4508 1 0 0
chr8:144360408|144360644 hsa-miR-4656 0 1 0
chr8:144360408|144360644 hsa-miR-4682 0 1 0
chr8:144360408|144360644 hsa-miR-4751 0 1 0
chr8:144360408|144360644 hsa-miR-6085 1 1 0
chr8:144360408|144360644 hsa-miR-7976 0 1 0
chr8:144360408|144360644 hsa-miR-17-3p 0 1 0
chr8:144360408|144360644 hsa-miR-4731-5p 0 1 0
chr8:144360408|144360644 hsa-miR-4700-3p 0 1 0
chr8:144360408|144360644 hsa-miR-1972 0 1 0
chr8:144360408|144360644 hsa-miR-6720-5p 1 1 0
chr8:144360408|144360644 hsa-miR-3663-3p 1 0 0
chr8:144360408|144360644 hsa-miR-6089 1 0 0
chr8:144360408|144360644 hsa-miR-296-5p 1 0 0
chr8:144360408|144360644 hsa-miR-770-5p 1 1 0
chr8:144360408|144360644 hsa-miR-191-3p 0 1 0
chr8:144360408|144360644 hsa-miR-185-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6798-5p 1 0 0
chr8:144360408|144360644 hsa-miR-2277-3p 1 0 0
chr8:144360408|144360644 hsa-miR-4640-5p 1 1 0
chr8:144360408|144360644 hsa-miR-3127-5p 0 1 0
chr8:144360408|144360644 hsa-miR-4690-5p 0 1 0
chr8:144360408|144360644 hsa-miR-103a-3p 0 1 0
chr8:144360408|144360644 hsa-miR-4446-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6789-5p 1 0 0
chr8:144360408|144360644 hsa-miR-3065-3p 0 1 0
chr8:144360408|144360644 hsa-miR-383-3p 0 1 0
chr8:144360408|144360644 hsa-miR-4632-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6859-3p 1 0 0
chr8:144360408|144360644 hsa-miR-6816-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6779-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6890-3p 0 1 0
chr8:144360408|144360644 hsa-miR-1207-5p 1 0 0
chr8:144360408|144360644 hsa-miR-4763-3p 1 0 0
chr8:144360408|144360644 hsa-miR-6816-5p 1 0 0
chr8:144360408|144360644 hsa-miR-6726-5p 1 0 0
chr8:144360408|144360644 hsa-miR-6743-5p 1 0 0
chr8:144360408|144360644 hsa-miR-6752-5p 1 0 0
chr8:144360408|144360644 hsa-miR-6813-5p 1 1 0
chr8:144360408|144360644 hsa-miR-6722-3p 1 0 0
chr8:144360408|144360644 hsa-miR-3620-5p 1 0 0
chr8:144360408|144360644 hsa-miR-1909-3p 1 0 0
chr8:144360408|144360644 hsa-miR-4685-5p 0 1 0
chr8:144360408|144360644 hsa-miR-6846-5p 1 0 0
chr8:144360408|144360644 hsa-miR-6848-5p 1 1 0
chr8:144360408|144360644 hsa-miR-4722-3p 0 1 0
chr8:144360408|144360644 hsa-miR-6792-3p 1 0 0
chr8:144360408|144360644 hsa-miR-6512-3p 0 1 0
chr8:144360408|144360644 hsa-miR-4756-5p 1 1 0
chr8:144360408|144360644 hsa-miR-7157-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:144360408|144360644
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MAYHLAVVLGSAANPLACFLAMGVLCRYTRTPSPCAGGTQG
Nucleotide Sequence CTGGCCTACCACCTGGCTGTGGTGCTGGGCAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGGTACACAAGGACCCCCAGCCCCTGTGCGGGTGGAACTCAGGGCTAG
CircID chr8:144360408|144360644
ORF Type ORF2
Protein Length 71
Nucleotide Length 213
Protein Sequence MWCWAVLPIPWPASWPWVCCAGTQGPPAPVRVELRARSQVLAQSALTFCSLTAGPWQGWAASLCWACSVGA
Nucleotide Sequence CTGTGGTGCTGGGCAGTGCTGCCAATCCCCTGGCCTGCTTCCTGGCCATGGGTGTGCTGTGCAGGTACACAAGGACCCCCAGCCCCTGTGCGGGTGGAACTCAGGGCTAGGAGCCAGGTCCTGGCGCAGTCAGCCCTGACATTCTGCTCGCTCACTGCAGGTCCTTGGCAGGGCTGGGCGGCCTCTCTCTGCTGGGCGTGTTCTGTGGGGGCT
CircID chr8:144360408|144360644
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MLPGHGCAVQVHKDPQPLCGWNSGLGARSWRSQP
Nucleotide Sequence CTGCTTCCTGGCCATGGGTGTGCTGTGCAGGTACACAAGGACCCCCAGCCCCTGTGCGGGTGGAACTCAGGGCTAGGAGCCAGGTCCTGGCGCAGTCAGCCCTGA
CircID chr8:144360408|144360644
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MSSTRTGAGGPCVPAQHTHGQEAGQGIGSTAQHHSQVVGQTP
Nucleotide Sequence CTGAGTTCCACCCGCACAGGGGCTGGGGGTCCTTGTGTACCTGCACAGCACACCCATGGCCAGGAAGCAGGCCAGGGGATTGGCAGCACTGCCCAGCACCACAGCCAGGTGGTAGGCCAGACGCCC
CircID chr8:144360408|144360644
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MGVLVYLHSTPMARKQARGLAALPSTTARW
Nucleotide Sequence CTGGGGGTCCTTGTGTACCTGCACAGCACACCCATGGCCAGGAAGCAGGCCAGGGGATTGGCAGCACTGCCCAGCACCACAGCCAGGTGGTAG
CircID chr8:144360408|144360644
ORF Type ORF6
Protein Length 50
Nucleotide Length 150
Protein Sequence MRQDLAPSPEFHPHRGWGSLCTCTAHPWPGSRPGDWQHCPAPQPGGRPDA
Nucleotide Sequence CTGCGCCAGGACCTGGCTCCTAGCCCTGAGTTCCACCCGCACAGGGGCTGGGGGTCCTTGTGTACCTGCACAGCACACCCATGGCCAGGAAGCAGGCCAGGGGATTGGCAGCACTGCCCAGCACCACAGCCAGGTGGTAGGCCAGACGCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab