CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144361001|144361127
Strand -
CircType exon
Host Gene ENSG00000185803.7;
Algorism CIRI2;
Sequence CCCTGTGACTCCTGAGCCTGGGCAGGTGGGGACCCCGCTCCCCAACACCTGTCTTTCCCTCAATGCTGCCACCATGCCTGAGTGCCTGCAGCCCAGGAGGCCCGCACACCGGTACACTCGTGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144361001|144361127 hsa-miR-107 0 1 1
chr8:144361001|144361127 hsa-miR-484 0 1 1
chr8:144361001|144361127 hsa-miR-510-5p 0 0 1
chr8:144361001|144361127 hsa-miR-510-3p 0 0 1
chr8:144361001|144361127 hsa-miR-552-5p 0 0 1
chr8:144361001|144361127 hsa-miR-552-3p 0 0 1
chr8:144361001|144361127 hsa-miR-147b-5p 0 0 1
chr8:144361001|144361127 hsa-miR-147b-3p 0 0 1
chr8:144361001|144361127 hsa-miR-939-5p 0 0 1
chr8:144361001|144361127 hsa-miR-939-3p 0 0 1
chr8:144361001|144361127 hsa-miR-1205 0 0 1
chr8:144361001|144361127 hsa-miR-615-5p 0 1 1
chr8:144361001|144361127 hsa-miR-885-3p 1 0 1
chr8:144361001|144361127 hsa-miR-1224-3p 0 0 1
chr8:144361001|144361127 hsa-miR-513a-5p 0 0 1
chr8:144361001|144361127 hsa-miR-103 0 0 1
chr8:144361001|144361127 hsa-miR-220c 0 0 1
chr8:144361001|144361127 hsa-miR-24 0 0 1
chr8:144361001|144361127 hsa-miR-564 1 0 0
chr8:144361001|144361127 hsa-miR-2861 1 0 0
chr8:144361001|144361127 hsa-miR-3155a 0 1 0
chr8:144361001|144361127 hsa-miR-3196 1 0 0
chr8:144361001|144361127 hsa-miR-3621 1 0 0
chr8:144361001|144361127 hsa-miR-378g 0 1 0
chr8:144361001|144361127 hsa-miR-4437 0 1 0
chr8:144361001|144361127 hsa-miR-4466 1 0 0
chr8:144361001|144361127 hsa-miR-3155b 0 1 0
chr8:144361001|144361127 hsa-miR-3960 1 0 0
chr8:144361001|144361127 hsa-miR-4656 1 0 0
chr8:144361001|144361127 hsa-miR-4734 1 0 0
chr8:144361001|144361127 hsa-miR-4767 1 0 0
chr8:144361001|144361127 hsa-miR-6090 1 0 0
chr8:144361001|144361127 hsa-miR-6127 1 0 0
chr8:144361001|144361127 hsa-miR-12128 1 0 0
chr8:144361001|144361127 hsa-miR-3622a-5p 1 0 0
chr8:144361001|144361127 hsa-miR-3934-5p 0 1 0
chr8:144361001|144361127 hsa-miR-24-3p 0 1 0
chr8:144361001|144361127 hsa-miR-3622b-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6806-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6782-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6821-5p 1 0 0
chr8:144361001|144361127 hsa-miR-3934-3p 0 1 0
chr8:144361001|144361127 hsa-miR-1343-3p 0 1 0
chr8:144361001|144361127 hsa-miR-1226-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6516-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6749-5p 1 1 0
chr8:144361001|144361127 hsa-miR-6834-5p 0 1 0
chr8:144361001|144361127 hsa-miR-103a-3p 0 1 0
chr8:144361001|144361127 hsa-miR-660-3p 0 1 0
chr8:144361001|144361127 hsa-miR-3158-3p 1 0 0
chr8:144361001|144361127 hsa-miR-214-3p 1 0 0
chr8:144361001|144361127 hsa-miR-3664-3p 0 1 0
chr8:144361001|144361127 hsa-miR-6865-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6893-5p 1 1 0
chr8:144361001|144361127 hsa-miR-1343-5p 0 1 0
chr8:144361001|144361127 hsa-miR-10401-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6763-5p 0 1 0
chr8:144361001|144361127 hsa-miR-6797-5p 1 0 0
chr8:144361001|144361127 hsa-miR-5189-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6862-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6791-3p 0 1 0
chr8:144361001|144361127 hsa-miR-6783-3p 0 1 0
chr8:144361001|144361127 hsa-miR-10394-5p 0 1 0
chr8:144361001|144361127 hsa-miR-3619-5p 1 0 0
chr8:144361001|144361127 hsa-miR-6715b-5p 0 1 0
chr8:144361001|144361127 hsa-miR-4781-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:144361001|144361127
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MSLGRWGPRSPTPVFPSMLPPCLSACSPGGPHTGTLVD
Nucleotide Sequence CTGAGCCTGGGCAGGTGGGGACCCCGCTCCCCAACACCTGTCTTTCCCTCAATGCTGCCACCATGCCTGAGTGCCTGCAGCCCAGGAGGCCCGCACACCGGTACACTCGTGGAC

CircID chr8:144361001|144361127
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MQALRHGGSIEGKTGVGERGPHLPRLRSHR
Nucleotide Sequence CTGCAGGCACTCAGGCATGGTGGCAGCATTGAGGGAAAGACAGGTGTTGGGGAGCGGGGTCCCCACCTGCCCAGGCTCAGGAGTCACAGG

CircID chr8:144361001|144361127
ORF Type ORF3
Protein Length 32
Nucleotide Length 96
Protein Sequence MGCRHSGMVAALRERQVLGSGVPTCPGSGVTG
Nucleotide Sequence CTGGGCTGCAGGCACTCAGGCATGGTGGCAGCATTGAGGGAAAGACAGGTGTTGGGGAGCGGGGTCCCCACCTGCCCAGGCTCAGGAGTCACAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites