CircRNA Information

General Information
circRNA Basic Information
CircID chr8:144791277|144791448
Strand -
CircType exon
Host Gene ENSG00000161016.14;
Algorism CIRI2;
Sequence CAACCACAGCTCTGTTGGCTGAGGAGATAACCTTCTTGGAGCCGGAGGGCAGCTTCACACGGGTCTTCTTGGTCTCAGGGTTGTGGGAGATAACGGTGGCATAGTTCCCTGATGCCCGGGCCAGCTTGCCACGGTCTCCAGGCTTCTCCTCCAGGCAGCACACGATTGTACC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:144791277|144791448 hsa-miR-22-5p 0 0 1
chr8:144791277|144791448 hsa-miR-22-3p 0 0 1
chr8:144791277|144791448 hsa-miR-31-5p 0 0 1
chr8:144791277|144791448 hsa-miR-31-3p 0 0 1
chr8:144791277|144791448 hsa-miR-150-5p 0 0 1
chr8:144791277|144791448 hsa-miR-150-3p 0 0 1
chr8:144791277|144791448 hsa-miR-154-5p 0 0 1
chr8:144791277|144791448 hsa-miR-154-3p 0 0 1
chr8:144791277|144791448 hsa-miR-661 1 0 1
chr8:144791277|144791448 hsa-miR-765 0 1 1
chr8:144791277|144791448 hsa-miR-127-5p 0 0 1
chr8:144791277|144791448 hsa-miR-769-5p 0 0 1
chr8:144791277|144791448 hsa-miR-532-3p 0 1 1
chr8:144791277|144791448 hsa-miR-188-3p 0 0 1
chr8:144791277|144791448 hsa-miR-125a-5p 0 1 1
chr8:144791277|144791448 hsa-miR-125b 0 0 1
chr8:144791277|144791448 hsa-miR-1254 0 0 1
chr8:144791277|144791448 hsa-miR-1538 1 1 0
chr8:144791277|144791448 hsa-miR-3176 1 0 0
chr8:144791277|144791448 hsa-miR-4324 0 1 0
chr8:144791277|144791448 hsa-miR-4254 0 1 0
chr8:144791277|144791448 hsa-miR-4751 1 0 0
chr8:144791277|144791448 hsa-miR-4784 0 1 0
chr8:144791277|144791448 hsa-miR-5695 0 1 0
chr8:144791277|144791448 hsa-miR-5703 0 1 0
chr8:144791277|144791448 hsa-miR-5787 1 0 0
chr8:144791277|144791448 hsa-miR-4747-3p 1 0 0
chr8:144791277|144791448 hsa-miR-18a-3p 1 1 0
chr8:144791277|144791448 hsa-miR-3157-5p 0 1 0
chr8:144791277|144791448 hsa-miR-6894-5p 1 0 0
chr8:144791277|144791448 hsa-miR-4786-5p 0 1 0
chr8:144791277|144791448 hsa-miR-3150b-3p 0 1 0
chr8:144791277|144791448 hsa-miR-6882-3p 1 0 0
chr8:144791277|144791448 hsa-miR-4713-5p 0 1 0
chr8:144791277|144791448 hsa-miR-4715-3p 0 1 0
chr8:144791277|144791448 hsa-miR-6749-5p 1 0 0
chr8:144791277|144791448 hsa-miR-6889-3p 1 0 0
chr8:144791277|144791448 hsa-miR-6746-3p 1 0 0
chr8:144791277|144791448 hsa-miR-1914-5p 1 0 0
chr8:144791277|144791448 hsa-miR-1227-3p 0 1 0
chr8:144791277|144791448 hsa-miR-11181-3p 0 1 0
chr8:144791277|144791448 hsa-miR-4728-5p 1 0 0
chr8:144791277|144791448 hsa-miR-939-5p 1 0 0
chr8:144791277|144791448 hsa-miR-6724-5p 1 0 0
chr8:144791277|144791448 hsa-miR-6791-5p 1 1 0
chr8:144791277|144791448 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:144791277|144791448
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MLAEEITFLEPEGSFTRVFLVSGLWEITVA
Nucleotide Sequence CTGTTGGCTGAGGAGATAACCTTCTTGGAGCCGGAGGGCAGCTTCACACGGGTCTTCTTGGTCTCAGGGTTGTGGGAGATAACGGTGGCATAG

CircID chr8:144791277|144791448
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV
Nucleotide Sequence CTGGAGGAGAAGCCTGGAGACCGTGGCAAGCTGGCCCGGGCATCAGGGAACTATGCCACCGTTATCTCCCACAACCCTGAGACCAAGAAGACCCGTGTGAAGCTGCCCTCCGGCTCCAAGAAGGTTATCTCCTCAGCCAACAGAGCTGTGGTT

CircID chr8:144791277|144791448
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence METVASWPGHQGTMPPLSPTTLRPRRPV
Nucleotide Sequence CTGGAGACCGTGGCAAGCTGGCCCGGGCATCAGGGAACTATGCCACCGTTATCTCCCACAACCCTGAGACCAAGAAGACCCGTGTGA

CircID chr8:144791277|144791448
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MPGGEAWRPWQAGPGIRELCHRYLPQP
Nucleotide Sequence CTGCCTGGAGGAGAAGCCTGGAGACCGTGGCAAGCTGGCCCGGGCATCAGGGAACTATGCCACCGTTATCTCCCACAACCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites