CircNet

General Information

circRNA Basic Information

CircID	chr8:17543318\|17543715
Strand	+
CircType	exon
Host Gene	ENSG00000003989.16;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTCGCCTTCGTCAGACGTCAGAATGATTCCTTGCAGAGCCGCGCTGACCTTTGCCCGATGTCTGATCCGGAGAAAAATCGTGACCCTGGACAGTCTAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGGTTTATGTCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTCTGCTATGCCGAATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATATTTGTACACCTACGTGACTGTCGGAGAGCTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCGTATGTGATAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:17543318\|17543715	hsa-miR-10a-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:17543318\|17543715
ORF Type	ORF1
Protein Length	125
Nucleotide Length	375
Protein Sequence	MIPCRAALTFARCLIRRKIVTLDSLEDTKLCRCLSTMDLIALGVGSTLGAGVYVLAGEVAKADSGPSIVVSFLIAALASVMAGLCYAEFGARVPKTGSAYLYTYVTVGELWAFITGWNLILSYVI
Nucleotide Sequence	ATGATTCCTTGCAGAGCCGCGCTGACCTTTGCCCGATGTCTGATCCGGAGAAAAATCGTGACCCTGGACAGTCTAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGGTTTATGTCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTCTGCTATGCCGAATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATATTTGTACACCTACGTGACTGTCGGAGAGCTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCGTATGTGATA

CircID	chr8:17543318\|17543715
ORF Type	ORF2
Protein Length	113
Nucleotide Length	339
Protein Sequence	MSDPEKNRDPGQSRRHQIMPLLIHHGPHCPGRWKHPWGRGLCPRWGGGQGRLGPQHRGVLPHCCPGFSDGWPLLCRIWGPCSQDGVCIFVHLRDCRRAVGLHHWLESHFIVCD
Nucleotide Sequence	ATGTCTGATCCGGAGAAAAATCGTGACCCTGGACAGTCTAGAAGACACCAAATTATGCCGCTGCTTATCCACCATGGACCTCATTGCCCTGGGCGTTGGAAGCACCCTTGGGGCCGGGGTTTATGTCCTCGCTGGGGAGGTGGCCAAGGCAGACTCGGGCCCCAGCATCGTGGTGTCCTTCCTCATTGCTGCCCTGGCTTCAGTGATGGCTGGCCTCTGCTATGCCGAATTTGGGGCCCGTGTTCCCAAGACGGGGTCTGCATATTTGTACACCTACGTGACTGTCGGAGAGCTGTGGGCCTTCATCACTGGCTGGAATCTCATTTTATCGTATGTGAT

CircID	chr8:17543318\|17543715
ORF Type	ORF3
Protein Length	47
Nucleotide Length	141
Protein Sequence	MRSMVDKQRHNLVSSRLSRVTIFLRIRHRAKVSAALQGIILTSDEGD
Nucleotide Sequence	ATGAGGTCCATGGTGGATAAGCAGCGGCATAATTTGGTGTCTTCTAGACTGTCCAGGGTCACGATTTTTCTCCGGATCAGACATCGGGCAAAGGTCAGCGCGGCTCTGCAAGGAATCATTCTGACGTCTGACGAAGGCGAC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:17543318\|17543715	U2AF2	3	1	0
chr8:17543318\|17543715	MOV10	0	1	0
chr8:17543318\|17543715	ELAVL1	0	2	2
chr8:17543318\|17543715	SF3B4	1	1	0
chr8:17543318\|17543715	SF3A3	1	1	0
chr8:17543318\|17543715	PRPF8	1	2	2
chr8:17543318\|17543715	UPF1	0	1	0
chr8:17543318\|17543715	FMR1	0	1	4
chr8:17543318\|17543715	NUDT21	2	0	1
chr8:17543318\|17543715	FUS	1	1	0
chr8:17543318\|17543715	SRSF1	0	1	4
chr8:17543318\|17543715	U2AF1	0	0	1
chr8:17543318\|17543715	NOP56	0	0	1
chr8:17543318\|17543715	SRSF9	0	0	2
chr8:17543318\|17543715	DDX54	0	0	7
chr8:17543318\|17543715	MSI2	0	0	2
chr8:17543318\|17543715	PTBP1	0	4	0
chr8:17543318\|17543715	DDX3X	0	0	1
chr8:17543318\|17543715	ZC3H7B	0	0	1
chr8:17543318\|17543715	SMNDC1	1	0	0
chr8:17543318\|17543715	AUH	0	0	1
chr8:17543318\|17543715	ACIN1	0	2	1
chr8:17543318\|17543715	LIN28B	1	2	2
chr8:17543318\|17543715	LIN28A	0	1	0
chr8:17543318\|17543715	RANGAP1	0	0	2
chr8:17543318\|17543715	BCCIP	1	0	1
chr8:17543318\|17543715	SND1	1	3	5
chr8:17543318\|17543715	IGF2BP1	1	0	0
chr8:17543318\|17543715	IGF2BP3	0	0	1
chr8:17543318\|17543715	IGF2BP2	0	0	1
chr8:17543318\|17543715	BUD13	2	4	3
chr8:17543318\|17543715	RBFOX2	1	0	0
chr8:17543318\|17543715	CSTF2T	0	1	1
chr8:17543318\|17543715	DKC1	1	0	0
chr8:17543318\|17543715	AGO2	1	2	0
chr8:17543318\|17543715	EIF4A3	3	4	4
chr8:17543318\|17543715	FBL	0	1	1

CircRNA Information