CircRNA Information

General Information
circRNA Basic Information
CircID chr8:1784512|1784769
Strand -
CircType exon
Host Gene ENSG00000182372.6;
Algorism CIRI2;
Sequence AATGTCATGTGAATTCTGGAGGGGACACGGTCACACTGCAGCATCAGCACCCGGTGAATGTGGTTCTCTTCCCATGTCCGAATTTTGTGAGCTCCACACGGGCAGGGTTGCATCTGTTTTATTCTCTGATTGATTCTAAGCCCCATGTCCCTGGCACAGGATGGCTGCTTGGCAGTAGGGAGTGGATGAACCAGTAGTACCCAGGGCTGCCAGGCAGGGCCCTGCAGGGGACAGACCCAAGGGCTGATATGGGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:1784512|1784769 hsa-miR-23a-5p 0 0 1
chr8:1784512|1784769 hsa-miR-23a-3p 0 0 1
chr8:1784512|1784769 hsa-miR-181c-5p 0 0 1
chr8:1784512|1784769 hsa-miR-181c-3p 0 0 1
chr8:1784512|1784769 hsa-miR-23b-5p 0 0 1
chr8:1784512|1784769 hsa-miR-23b-3p 0 0 1
chr8:1784512|1784769 hsa-miR-181d-5p 0 0 1
chr8:1784512|1784769 hsa-miR-181d-3p 0 0 1
chr8:1784512|1784769 hsa-miR-589-5p 0 0 1
chr8:1784512|1784769 hsa-miR-589-3p 0 0 1
chr8:1784512|1784769 hsa-miR-661 1 0 1
chr8:1784512|1784769 hsa-miR-1227-5p 0 0 1
chr8:1784512|1784769 hsa-miR-1227-3p 0 0 1
chr8:1784512|1784769 hsa-miR-1205 0 1 1
chr8:1784512|1784769 hsa-miR-1291 0 1 1
chr8:1784512|1784769 hsa-miR-885-3p 0 0 1
chr8:1784512|1784769 hsa-miR-193a-5p 0 0 1
chr8:1784512|1784769 hsa-miR-1225-5p 0 0 1
chr8:1784512|1784769 hsa-miR-331-3p 0 0 1
chr8:1784512|1784769 hsa-miR-181a 0 0 1
chr8:1784512|1784769 hsa-miR-181b 0 0 1
chr8:1784512|1784769 hsa-miR-1254 0 0 1
chr8:1784512|1784769 hsa-miR-129-3p 0 0 1
chr8:1784512|1784769 hsa-miR-623 0 1 0
chr8:1784512|1784769 hsa-miR-1202 1 0 0
chr8:1784512|1784769 hsa-miR-3175 1 1 0
chr8:1784512|1784769 hsa-miR-3657 0 1 0
chr8:1784512|1784769 hsa-miR-3911 0 1 0
chr8:1784512|1784769 hsa-miR-4669 1 0 0
chr8:1784512|1784769 hsa-miR-5683 0 1 0
chr8:1784512|1784769 hsa-miR-8073 0 1 0
chr8:1784512|1784769 hsa-miR-8075 0 1 0
chr8:1784512|1784769 hsa-miR-12115 1 0 0
chr8:1784512|1784769 hsa-miR-211-3p 1 0 0
chr8:1784512|1784769 hsa-miR-17-3p 0 1 0
chr8:1784512|1784769 hsa-miR-6861-5p 0 1 0
chr8:1784512|1784769 hsa-miR-4708-5p 0 1 0
chr8:1784512|1784769 hsa-miR-27a-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6833-5p 1 0 0
chr8:1784512|1784769 hsa-miR-3663-3p 1 0 0
chr8:1784512|1784769 hsa-miR-7847-3p 1 0 0
chr8:1784512|1784769 hsa-miR-6741-5p 1 1 0
chr8:1784512|1784769 hsa-miR-4655-5p 1 0 0
chr8:1784512|1784769 hsa-miR-3189-5p 0 1 0
chr8:1784512|1784769 hsa-miR-7845-5p 1 1 0
chr8:1784512|1784769 hsa-miR-1915-5p 0 1 0
chr8:1784512|1784769 hsa-miR-3151-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6798-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6774-3p 0 1 0
chr8:1784512|1784769 hsa-miR-5006-5p 1 1 0
chr8:1784512|1784769 hsa-miR-5088-5p 1 0 0
chr8:1784512|1784769 hsa-miR-4793-5p 1 1 0
chr8:1784512|1784769 hsa-miR-4640-5p 1 0 0
chr8:1784512|1784769 hsa-miR-937-5p 1 0 0
chr8:1784512|1784769 hsa-miR-339-5p 1 1 0
chr8:1784512|1784769 hsa-miR-181b-5p 0 1 0
chr8:1784512|1784769 hsa-miR-3189-3p 0 1 0
chr8:1784512|1784769 hsa-miR-7160-3p 0 1 0
chr8:1784512|1784769 hsa-miR-6752-3p 0 1 0
chr8:1784512|1784769 hsa-miR-503-3p 1 0 0
chr8:1784512|1784769 hsa-miR-1914-5p 0 1 0
chr8:1784512|1784769 hsa-miR-1296-3p 1 0 0
chr8:1784512|1784769 hsa-miR-3670 0 1 0
chr8:1784512|1784769 hsa-miR-3173-5p 0 1 0
chr8:1784512|1784769 hsa-miR-3675-5p 0 1 0
chr8:1784512|1784769 hsa-miR-6732-3p 0 1 0
chr8:1784512|1784769 hsa-miR-6775-5p 1 0 0
chr8:1784512|1784769 hsa-miR-1343-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6743-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6756-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6836-5p 0 1 0
chr8:1784512|1784769 hsa-miR-10396a-5p 1 0 0
chr8:1784512|1784769 hsa-miR-4685-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6799-3p 0 1 0
chr8:1784512|1784769 hsa-miR-6855-5p 1 1 0
chr8:1784512|1784769 hsa-miR-6750-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6791-5p 1 0 0
chr8:1784512|1784769 hsa-miR-6753-3p 0 1 0
chr8:1784512|1784769 hsa-miR-7107-3p 0 1 0
chr8:1784512|1784769 hsa-miR-6775-3p 0 1 0
chr8:1784512|1784769 hsa-miR-10394-5p 0 1 0
chr8:1784512|1784769 hsa-miR-6500-5p 1 0 0
chr8:1784512|1784769 hsa-miR-146a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:1784512|1784769
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MSCEFWRGHGHTAASAPGECGSLPMSEFCELHTGRVASVLFSD
Nucleotide Sequence ATGTCATGTGAATTCTGGAGGGGACACGGTCACACTGCAGCATCAGCACCCGGTGAATGTGGTTCTCTTCCCATGTCCGAATTTTGTGAGCTCCACACGGGCAGGGTTGCATCTGTTTTATTCTCTGATTGA
CircID chr8:1784512|1784769
ORF Type ORF2
Protein Length 53
Nucleotide Length 162
Protein Sequence MQHQHPVNVVLFPCPNFVSSTRAGLHLFYSLIDSKPHVPGTGWLLGSREWMNQ
Nucleotide Sequence CTGCAGCATCAGCACCCGGTGAATGTGGTTCTCTTCCCATGTCCGAATTTTGTGAGCTCCACACGGGCAGGGTTGCATCTGTTTTATTCTCTGATTGATTCTAAGCCCCATGTCCCTGGCACAGGATGGCTGCTTGGCAGTAGGGAGTGGATGAACCAGTAG
CircID chr8:1784512|1784769
ORF Type ORF3
Protein Length 34
Nucleotide Length 105
Protein Sequence MGLSPAGPCLAALGTTGSSTPYCQAAILCQGHGA
Nucleotide Sequence TTGGGTCTGTCCCCTGCAGGGCCCTGCCTGGCAGCCCTGGGTACTACTGGTTCATCCACTCCCTACTGCCAAGCAGCCATCCTGTGCCAGGGACATGGGGCTTAG
CircID chr8:1784512|1784769
ORF Type ORF4
Protein Length 75
Nucleotide Length 225
Protein Sequence MQGPAWQPWVLLVHPLPTAKQPSCARDMGLRINQRIKQMQPCPCGAHKIRTWEENHIHRVLMLQCDRVPSRIHMT
Nucleotide Sequence CTGCAGGGCCCTGCCTGGCAGCCCTGGGTACTACTGGTTCATCCACTCCCTACTGCCAAGCAGCCATCCTGTGCCAGGGACATGGGGCTTAGAATCAATCAGAGAATAAAACAGATGCAACCCTGCCCGTGTGGAGCTCACAAAATTCGGACATGGGAAGAGAACCACATTCACCGGGTGCTGATGCTGCAGTGTGACCGTGTCCCCTCCAGAATTCACATGACA
CircID chr8:1784512|1784769
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MPGSPGYYWFIHSLLPSSHPVPGTWGLESIRE
Nucleotide Sequence CTGCCTGGCAGCCCTGGGTACTACTGGTTCATCCACTCCCTACTGCCAAGCAGCCATCCTGTGCCAGGGACATGGGGCTTAGAATCAATCAGAGAATAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab