CircRNA Information

General Information
circRNA Basic Information
CircID chr8:18222042|18222257
Strand +
CircType exon
Host Gene ENSG00000171428.12;
Algorism CIRI2;
Sequence CTGGAGACACCATCCACCCCGATTTCTTCTCACAACTTGATCAAAAATGGCCTCTAAGCCTAAGTCCATGGCATCCCCACAATGGATGTTAAGGTTCTCAAAGGGAACAGCTCGGATCTGGTGTTGAAGAATGTCAGTTAATGTTTCCAAGTCCAATTTGTTCCTAGACTTCTTATAGCCAATTCTTTCAAGATATGCTTCAATGTCCATGATCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:18222042|18222257 hsa-miR-204-5p 0 0 1
chr8:18222042|18222257 hsa-miR-204-3p 0 0 1
chr8:18222042|18222257 hsa-miR-211-5p 0 0 1
chr8:18222042|18222257 hsa-miR-211-3p 0 0 1
chr8:18222042|18222257 hsa-miR-146a-5p 0 0 1
chr8:18222042|18222257 hsa-miR-146a-3p 0 0 1
chr8:18222042|18222257 hsa-miR-186-5p 0 0 1
chr8:18222042|18222257 hsa-miR-186-3p 0 0 1
chr8:18222042|18222257 hsa-miR-382-5p 0 0 1
chr8:18222042|18222257 hsa-miR-382-3p 0 0 1
chr8:18222042|18222257 hsa-miR-488-5p 0 0 1
chr8:18222042|18222257 hsa-miR-488-3p 0 0 1
chr8:18222042|18222257 hsa-miR-494-5p 0 0 1
chr8:18222042|18222257 hsa-miR-494-3p 0 0 1
chr8:18222042|18222257 hsa-miR-580-5p 0 0 1
chr8:18222042|18222257 hsa-miR-580-3p 0 0 1
chr8:18222042|18222257 hsa-miR-589-5p 0 0 1
chr8:18222042|18222257 hsa-miR-589-3p 0 0 1
chr8:18222042|18222257 hsa-miR-608 0 0 1
chr8:18222042|18222257 hsa-miR-623 0 0 1
chr8:18222042|18222257 hsa-miR-421 0 0 1
chr8:18222042|18222257 hsa-miR-766-5p 0 0 1
chr8:18222042|18222257 hsa-miR-766-3p 0 0 1
chr8:18222042|18222257 hsa-miR-890 0 0 1
chr8:18222042|18222257 hsa-miR-877-5p 0 0 1
chr8:18222042|18222257 hsa-miR-877-3p 0 0 1
chr8:18222042|18222257 hsa-miR-1253 0 0 1
chr8:18222042|18222257 hsa-miR-127-5p 0 0 1
chr8:18222042|18222257 hsa-miR-491-5p 0 0 1
chr8:18222042|18222257 hsa-miR-615-3p 0 0 1
chr8:18222042|18222257 hsa-miR-490-5p 0 0 1
chr8:18222042|18222257 hsa-miR-146b-5p 0 0 1
chr8:18222042|18222257 hsa-miR-1269 0 0 1
chr8:18222042|18222257 hsa-miR-1300 0 0 1
chr8:18222042|18222257 hsa-miR-1826 0 0 1
chr8:18222042|18222257 hsa-miR-422a 1 1 0
chr8:18222042|18222257 hsa-miR-601 1 0 0
chr8:18222042|18222257 hsa-miR-638 0 1 0
chr8:18222042|18222257 hsa-miR-762 1 0 0
chr8:18222042|18222257 hsa-miR-765 1 0 0
chr8:18222042|18222257 hsa-miR-378b 1 1 0
chr8:18222042|18222257 hsa-miR-3138 1 1 0
chr8:18222042|18222257 hsa-miR-3188 1 0 0
chr8:18222042|18222257 hsa-miR-378c 1 1 0
chr8:18222042|18222257 hsa-miR-4271 1 0 0
chr8:18222042|18222257 hsa-miR-378f 1 0 0
chr8:18222042|18222257 hsa-miR-4538 1 0 0
chr8:18222042|18222257 hsa-miR-4651 0 1 0
chr8:18222042|18222257 hsa-miR-4656 1 0 0
chr8:18222042|18222257 hsa-miR-4689 1 1 0
chr8:18222042|18222257 hsa-miR-5100 0 1 0
chr8:18222042|18222257 hsa-miR-5572 1 0 0
chr8:18222042|18222257 hsa-miR-6088 1 0 0
chr8:18222042|18222257 hsa-miR-378j 1 0 0
chr8:18222042|18222257 hsa-miR-8065 0 1 0
chr8:18222042|18222257 hsa-miR-432-3p 0 1 0
chr8:18222042|18222257 hsa-miR-27a-5p 1 0 0
chr8:18222042|18222257 hsa-miR-1227-5p 1 0 0
chr8:18222042|18222257 hsa-miR-6089 1 0 0
chr8:18222042|18222257 hsa-miR-7154-3p 1 0 0
chr8:18222042|18222257 hsa-miR-3150b-3p 1 0 0
chr8:18222042|18222257 hsa-miR-3944-3p 1 0 0
chr8:18222042|18222257 hsa-miR-2681-3p 0 1 0
chr8:18222042|18222257 hsa-miR-181b-5p 0 1 0
chr8:18222042|18222257 hsa-miR-664b-5p 1 0 0
chr8:18222042|18222257 hsa-miR-676-5p 0 1 0
chr8:18222042|18222257 hsa-miR-6803-5p 1 0 0
chr8:18222042|18222257 hsa-miR-10401-5p 1 0 0
chr8:18222042|18222257 hsa-miR-6751-5p 1 0 0
chr8:18222042|18222257 hsa-miR-4755-5p 0 1 0
chr8:18222042|18222257 hsa-miR-6858-5p 1 0 0
chr8:18222042|18222257 hsa-miR-6856-5p 1 0 0
chr8:18222042|18222257 hsa-miR-378a-3p 0 1 0
chr8:18222042|18222257 hsa-miR-6762-5p 1 0 0
chr8:18222042|18222257 hsa-miR-6855-3p 0 1 0
chr8:18222042|18222257 hsa-miR-21-3p 0 1 0
chr8:18222042|18222257 hsa-miR-147b-5p 0 1 0
chr8:18222042|18222257 hsa-miR-181d-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr8:18222042|18222257
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MASKPKSMASPQWMLRFSKGTARIWC
Nucleotide Sequence ATGGCCTCTAAGCCTAAGTCCATGGCATCCCCACAATGGATGTTAAGGTTCTCAAAGGGAACAGCTCGGATCTGGTGTTGA

CircID chr8:18222042|18222257
ORF Type ORF2
Protein Length 70
Nucleotide Length 210
Protein Sequence MDIEAYLERIGYKKSRNKLDLETLTDILQHQIRAVPFENLNIHCGDAMDLGLEAIFDQVVRRNRGGWCLQ
Nucleotide Sequence ATGGACATTGAAGCATATCTTGAAAGAATTGGCTATAAGAAGTCTAGGAACAAATTGGACTTGGAAACATTAACTGACATTCTTCAACACCAGATCCGAGCTGTTCCCTTTGAGAACCTTAACATCCATTGTGGGGATGCCATGGACTTAGGCTTAGAGGCCATTTTTGATCAAGTTGTGAGAAGAAATCGGGGTGGATGGTGTCTCCAG

CircID chr8:18222042|18222257
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MTFFNTRSELFPLRTLTSIVGMPWT
Nucleotide Sequence CTGACATTCTTCAACACCAGATCCGAGCTGTTCCCTTTGAGAACCTTAACATCCATTGTGGGGATGCCATGGACTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites