CircRNA Information

General Information
circRNA Basic Information
CircID chr8:22098227|22098496
Strand -
CircType exon
Host Gene ENSG00000158863.20;
Algorism CIRI2;
Sequence ATGCCTGCTGAGACCGAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAGAGCAAGGTGCTGGCAGCAGAGATGGAGAGGTTGGGGGTGGGGGAAGGGTGGGTTGACGGCTGGGGGGTGATTTGGGGGCTCACATGCATGTCCCTGAAGTTGTATCCTCATCCCCTAGAAGAGTCGGGTGGCCTTGAAGGCCCAGGAGAACCTGCTGCTCCTGGTGAGCATGGCCTCCCCAGCAGCTGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:22098227|22098496 hsa-miR-15a-5p 0 0 1
chr8:22098227|22098496 hsa-miR-15a-3p 0 0 1
chr8:22098227|22098496 hsa-miR-214-5p 0 0 1
chr8:22098227|22098496 hsa-miR-214-3p 0 0 1
chr8:22098227|22098496 hsa-miR-15b-5p 0 0 1
chr8:22098227|22098496 hsa-miR-15b-3p 0 0 1
chr8:22098227|22098496 hsa-miR-136-5p 0 0 1
chr8:22098227|22098496 hsa-miR-136-3p 0 0 1
chr8:22098227|22098496 hsa-miR-195-5p 0 0 1
chr8:22098227|22098496 hsa-miR-195-3p 0 0 1
chr8:22098227|22098496 hsa-miR-424-5p 0 0 1
chr8:22098227|22098496 hsa-miR-424-3p 0 0 1
chr8:22098227|22098496 hsa-miR-497-5p 0 0 1
chr8:22098227|22098496 hsa-miR-497-3p 0 0 1
chr8:22098227|22098496 hsa-miR-657 0 0 1
chr8:22098227|22098496 hsa-miR-665 0 0 1
chr8:22098227|22098496 hsa-miR-922 0 0 1
chr8:22098227|22098496 hsa-miR-939-5p 0 0 1
chr8:22098227|22098496 hsa-miR-939-3p 0 0 1
chr8:22098227|22098496 hsa-miR-1178-5p 0 0 1
chr8:22098227|22098496 hsa-miR-1178-3p 0 0 1
chr8:22098227|22098496 hsa-miR-1226-5p 0 0 1
chr8:22098227|22098496 hsa-miR-1226-3p 0 0 1
chr8:22098227|22098496 hsa-miR-1202 0 0 1
chr8:22098227|22098496 hsa-miR-1255a 0 0 1
chr8:22098227|22098496 hsa-miR-1321 0 0 1
chr8:22098227|22098496 hsa-miR-1225-3p 1 0 1
chr8:22098227|22098496 hsa-miR-885-3p 0 0 1
chr8:22098227|22098496 hsa-miR-361-3p 0 0 1
chr8:22098227|22098496 hsa-miR-1224-3p 1 0 1
chr8:22098227|22098496 hsa-miR-1260 0 0 1
chr8:22098227|22098496 hsa-miR-1280 0 0 1
chr8:22098227|22098496 hsa-miR-1233 0 0 1
chr8:22098227|22098496 hsa-miR-16 0 0 1
chr8:22098227|22098496 hsa-miR-1255b 0 0 1
chr8:22098227|22098496 hsa-miR-1185 0 0 1
chr8:22098227|22098496 hsa-miR-346 1 0 0
chr8:22098227|22098496 hsa-miR-1260a 1 0 0
chr8:22098227|22098496 hsa-miR-1913 1 0 0
chr8:22098227|22098496 hsa-miR-1260b 1 0 0
chr8:22098227|22098496 hsa-miR-4286 1 0 0
chr8:22098227|22098496 hsa-miR-3943 1 0 0
chr8:22098227|22098496 hsa-miR-4448 1 0 0
chr8:22098227|22098496 hsa-miR-4688 1 0 0
chr8:22098227|22098496 hsa-miR-197-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6749-3p 1 0 0
chr8:22098227|22098496 hsa-miR-3194-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6720-5p 1 0 0
chr8:22098227|22098496 hsa-miR-766-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6892-3p 1 0 0
chr8:22098227|22098496 hsa-miR-150-5p 1 0 0
chr8:22098227|22098496 hsa-miR-6845-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6716-3p 1 0 0
chr8:22098227|22098496 hsa-miR-4713-5p 1 0 0
chr8:22098227|22098496 hsa-miR-532-3p 1 0 0
chr8:22098227|22098496 hsa-miR-7109-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6884-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6763-3p 1 0 0
chr8:22098227|22098496 hsa-miR-7108-3p 1 0 0
chr8:22098227|22098496 hsa-miR-4707-3p 1 0 0
chr8:22098227|22098496 hsa-miR-1908-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6821-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6501-5p 1 0 0
chr8:22098227|22098496 hsa-miR-4640-3p 1 0 0
chr8:22098227|22098496 hsa-miR-1236-3p 1 0 0
chr8:22098227|22098496 hsa-miR-4687-5p 1 0 0
chr8:22098227|22098496 hsa-miR-4758-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6793-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6752-3p 1 0 0
chr8:22098227|22098496 hsa-miR-7151-5p 1 0 0
chr8:22098227|22098496 hsa-miR-6865-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6886-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6859-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6777-3p 1 0 0
chr8:22098227|22098496 hsa-miR-654-3p 1 0 0
chr8:22098227|22098496 hsa-miR-3620-3p 1 0 0
chr8:22098227|22098496 hsa-miR-4433a-5p 1 0 0
chr8:22098227|22098496 hsa-miR-4433b-5p 1 0 0
chr8:22098227|22098496 hsa-miR-6734-3p 1 0 0
chr8:22098227|22098496 hsa-miR-1249-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6729-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6800-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6750-3p 1 0 0
chr8:22098227|22098496 hsa-miR-3162-3p 1 0 0
chr8:22098227|22098496 hsa-miR-328-5p 1 0 0
chr8:22098227|22098496 hsa-miR-324-3p 1 0 0
chr8:22098227|22098496 hsa-miR-4722-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6893-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6511a-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6756-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6784-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6792-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6862-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6801-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6805-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6511b-3p 1 0 0
chr8:22098227|22098496 hsa-miR-6823-3p 1 0 0
chr8:22098227|22098496 hsa-miR-7114-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:22098227|22098496
ORF Type ORF1
Protein Length 90
Nucleotide Length 270
Protein Sequence MPAETEELDGGTTESNLITSLLGLCQSKVLAAEMERLGVGEGWVDGWGVIWGLTCMSLKLYPHPLEESGGLEGPGEPAAPGEHGLPSSCH
Nucleotide Sequence ATGCCTGCTGAGACCGAGGAGCTGGACGGTGGGACCACAGAGAGCAACCTGATTACCTCCCTGCTTGGGCTGTGCCAGAGCAAGGTGCTGGCAGCAGAGATGGAGAGGTTGGGGGTGGGGGAAGGGTGGGTTGACGGCTGGGGGGTGATTTGGGGGCTCACATGCATGTCCCTGAAGTTGTATCCTCATCCCCTAGAAGAGTCGGGTGGCCTTGAAGGCCCAGGAGAACCTGCTGCTCCTGGTGAGCATGGCCTCCCCAGCAGCTGCCAC
CircID chr8:22098227|22098496
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MGCARARCWQQRWRGWGWGKGGLTAGG
Nucleotide Sequence TTGGGCTGTGCCAGAGCAAGGTGCTGGCAGCAGAGATGGAGAGGTTGGGGGTGGGGGAAGGGTGGGTTGACGGCTGGGGGGTGA
CircID chr8:22098227|22098496
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MGGDLGAHMHVPEVVSSSPRRVGWP
Nucleotide Sequence CTGGGGGGTGATTTGGGGGCTCACATGCATGTCCCTGAAGTTGTATCCTCATCCCCTAGAAGAGTCGGGTGGCCTTGA
CircID chr8:22098227|22098496
ORF Type ORF4
Protein Length 63
Nucleotide Length 189
Protein Sequence MRIQLQGHACEPPNHPPAVNPPFPHPQPLHLCCQHLALAQPKQGGNQVALCGPTVQLLGLSRH
Nucleotide Sequence ATGAGGATACAACTTCAGGGACATGCATGTGAGCCCCCAAATCACCCCCCAGCCGTCAACCCACCCTTCCCCCACCCCCAACCTCTCCATCTCTGCTGCCAGCACCTTGCTCTGGCACAGCCCAAGCAGGGAGGTAATCAGGTTGCTCTCTGTGGTCCCACCGTCCAGCTCCTCGGTCTCAGCAGGCAT
CircID chr8:22098227|22098496
ORF Type ORF5
Protein Length 25
Nucleotide Length 78
Protein Sequence MLGRPCSPGAAGSPGPSRPPDSSRG
Nucleotide Sequence CTGCTGGGGAGGCCATGCTCACCAGGAGCAGCAGGTTCTCCTGGGCCTTCAAGGCCACCCGACTCTTCTAGGGGATGA
CircID chr8:22098227|22098496
ORF Type ORF6
Protein Length 55
Nucleotide Length 165
Protein Sequence MHVSPQITPQPSTHPSPTPNLSISAASTLLWHSPSREVIRLLSVVPPSSSSVSAG
Nucleotide Sequence ATGCATGTGAGCCCCCAAATCACCCCCCAGCCGTCAACCCACCCTTCCCCCACCCCCAACCTCTCCATCTCTGCTGCCAGCACCTTGCTCTGGCACAGCCCAAGCAGGGAGGTAATCAGGTTGCTCTCTGTGGTCCCACCGTCCAGCTCCTCGGTCTCAGCAGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab