CircNet

General Information

circRNA Basic Information

CircID	chr8:22498001\|22513432
Strand	+
CircType	exon
Host Gene	ENSG00000120910.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	TGTGTGCTGTATTTATGGAGTTTAAAGATTAATCATCCCAAAACATTGTTTCTGCTTCGGGGAAATCATGAATGCAGGCATCTTACAGACTATTTCACCTTCAAACAGGAATGTCGAATCAAATATTCGGAACAGGTGTATGATGCCTGTATGGAGACATTTGACTGTCTTCCTCTTGCTGCCCTCTTAAACCAGCAGTTTCTCTGTGTACATGGAGGAATGTCACCTGAAATTACTTCTTTAGATGACATTAGGAAATTAGACAGGTTTACGGAACCTCCCGCCTTTGGACCTGTGTGTGACCTGCTTTGGTCTGATCCCTCAGAGGATTATGGCAATGAGAAGACCTTGGAGCACTATACCCACAACACTGTCCGAGGGTGCTCTTATTTCTACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	miRanda	targetScan
chr8:22498001\|22513432	hsa-miR-29b-1-5p	1	1
chr8:22498001\|22513432	hsa-miR-125a-3p	1	1
chr8:22498001\|22513432	hsa-miR-33a-3p	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:22498001\|22513432
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	METFDCLPLAALLNQQFLCVHGGMSPEITSLDDIRKLDRFTEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTHNTVRGCSYFY
Nucleotide Sequence	ATGGAGACATTTGACTGTCTTCCTCTTGCTGCCCTCTTAAACCAGCAGTTTCTCTGTGTACATGGAGGAATGTCACCTGAAATTACTTCTTTAGATGACATTAGGAAATTAGACAGGTTTACGGAACCTCCCGCCTTTGGACCTGTGTGTGACCTGCTTTGGTCTGATCCCTCAGAGGATTATGGCAATGAGAAGACCTTGGAGCACTATACCCACAACACTGTCCGAGGGTGCTCTTATTTCTAC

CircID	chr8:22498001\|22513432
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MSSKEVISGDIPPCTQRNCWFKRAARGRQSNVSIQASYTCSEYLIRHSCLKVK*
Nucleotide Sequence	ATGTCATCTAAAGAAGTAATTTCAGGTGACATTCCTCCATGTACACAGAGAAACTGCTGGTTTAAGAGGGCAGCAAGAGGAAGACAGTCAAATGTCTCCATACAGGCATCATACACCTGTTCCGAATATTTGATTCGACATTCCTGTTTGAAGGTGAAATAG

CircID	chr8:22498001\|22513432
ORF Type	ORF3
Protein Length	41
Nucleotide Length	123
Protein Sequence	MNAGILQTISPSNRNVESNIRNRCMMPVWRHLTVFLLLPS*
Nucleotide Sequence	ATGAATGCAGGCATCTTACAGACTATTTCACCTTCAAACAGGAATGTCGAATCAAATATTCGGAACAGGTGTATGATGCCTGTATGGAGACATTTGACTGTCTTCCTCTTGCTGCCCTCTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:22498001\|22513432	U2AF2	1	9	0
chr8:22498001\|22513432	ELAVL1	3	2	1
chr8:22498001\|22513432	RBM47	0	0	1
chr8:22498001\|22513432	HNRNPC	1	9	0
chr8:22498001\|22513432	HNRNPA1	0	2	0
chr8:22498001\|22513432	ELAVL3	1	0	0
chr8:22498001\|22513432	CSTF2T	0	0	1
chr8:22498001\|22513432	NOP56	1	0	0
chr8:22498001\|22513432	DDX54	0	0	1
chr8:22498001\|22513432	PRPF8	0	1	0
chr8:22498001\|22513432	FXR2	0	0	1
chr8:22498001\|22513432	IGF2BP1	0	0	2
chr8:22498001\|22513432	NOP58	0	1	1
chr8:22498001\|22513432	PTBP1	0	1	0
chr8:22498001\|22513432	IGF2BP2	1	2	2
chr8:22498001\|22513432	EIF4A3	0	0	4
chr8:22498001\|22513432	FBL	0	0	1

CircRNA Information