CircRNA Information

General Information
circRNA Basic Information
CircID chr8:22924714|22924947
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence TCAATGCCTAAAGGTATTAATCTATAAGGGAGGAATTTTATGTACTGTGACAAGCTGTGAGACATTGTTAAGAGTAACGCTTCTCGGGAATCAGACCTTCCCTGCTTCTGAGATACCCCAGACAAGACCAGCAAAACCACCGACGGTCCCAACCCTGGGCTCAGTCGCAGAATGGAAAGAACCATGATTCTCCAAACCTGCAGCCAGGAGGTGAATCCACTCAAAAAACCCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:22924714|22924947 hsa-miR-27a-5p 0 0 1
chr8:22924714|22924947 hsa-miR-27a-3p 0 0 1
chr8:22924714|22924947 hsa-miR-27b-5p 0 0 1
chr8:22924714|22924947 hsa-miR-27b-3p 0 0 1
chr8:22924714|22924947 hsa-miR-493-5p 0 0 1
chr8:22924714|22924947 hsa-miR-493-3p 0 0 1
chr8:22924714|22924947 hsa-miR-587 0 0 1
chr8:22924714|22924947 hsa-miR-604 0 0 1
chr8:22924714|22924947 hsa-miR-620 0 0 1
chr8:22924714|22924947 hsa-miR-632 0 0 1
chr8:22924714|22924947 hsa-miR-637 0 0 1
chr8:22924714|22924947 hsa-miR-647 0 0 1
chr8:22924714|22924947 hsa-miR-655-5p 0 0 1
chr8:22924714|22924947 hsa-miR-655-3p 0 0 1
chr8:22924714|22924947 hsa-miR-657 0 0 1
chr8:22924714|22924947 hsa-miR-1231 0 0 1
chr8:22924714|22924947 hsa-miR-1205 0 1 1
chr8:22924714|22924947 hsa-miR-1256 0 0 1
chr8:22924714|22924947 hsa-miR-1270 0 0 1
chr8:22924714|22924947 hsa-miR-129-5p 0 0 1
chr8:22924714|22924947 hsa-miR-1225-3p 0 0 1
chr8:22924714|22924947 hsa-miR-296-3p 0 1 1
chr8:22924714|22924947 hsa-miR-876-3p 0 0 1
chr8:22924714|22924947 hsa-miR-1302 0 0 1
chr8:22924714|22924947 hsa-miR-342-3p 0 0 1
chr8:22924714|22924947 hsa-miR-1233 0 0 1
chr8:22924714|22924947 hsa-miR-128 0 0 1
chr8:22924714|22924947 hsa-miR-138 0 0 1
chr8:22924714|22924947 hsa-miR-768-5p 0 0 1
chr8:22924714|22924947 hsa-miR-101 0 0 1
chr8:22924714|22924947 hsa-miR-638 1 0 0
chr8:22924714|22924947 hsa-miR-298 1 1 0
chr8:22924714|22924947 hsa-miR-1183 1 0 0
chr8:22924714|22924947 hsa-miR-4507 1 0 0
chr8:22924714|22924947 hsa-miR-4748 0 1 0
chr8:22924714|22924947 hsa-miR-5572 1 0 0
chr8:22924714|22924947 hsa-miR-5787 1 0 0
chr8:22924714|22924947 hsa-miR-8073 1 0 0
chr8:22924714|22924947 hsa-miR-92a-1-5p 1 1 0
chr8:22924714|22924947 hsa-miR-128-1-5p 1 0 0
chr8:22924714|22924947 hsa-miR-218-2-3p 0 1 0
chr8:22924714|22924947 hsa-miR-6854-5p 0 1 0
chr8:22924714|22924947 hsa-miR-6510-5p 0 1 0
chr8:22924714|22924947 hsa-miR-1227-5p 1 0 0
chr8:22924714|22924947 hsa-miR-6089 1 0 0
chr8:22924714|22924947 hsa-miR-6890-5p 1 0 0
chr8:22924714|22924947 hsa-miR-6770-5p 1 0 0
chr8:22924714|22924947 hsa-miR-193b-5p 0 1 0
chr8:22924714|22924947 hsa-miR-4783-3p 1 0 0
chr8:22924714|22924947 hsa-miR-6823-5p 0 1 0
chr8:22924714|22924947 hsa-miR-660-3p 0 1 0
chr8:22924714|22924947 hsa-miR-6812-5p 1 0 0
chr8:22924714|22924947 hsa-miR-6737-5p 1 0 0
chr8:22924714|22924947 hsa-miR-6756-5p 1 0 0
chr8:22924714|22924947 hsa-miR-365a-5p 1 0 0
chr8:22924714|22924947 hsa-miR-365b-5p 1 0 0
chr8:22924714|22924947 hsa-miR-1199-5p 0 1 0
chr8:22924714|22924947 hsa-miR-6855-5p 1 1 0
chr8:22924714|22924947 hsa-miR-6724-5p 1 0 0
chr8:22924714|22924947 hsa-miR-769-3p 1 1 0
chr8:22924714|22924947 hsa-miR-10394-5p 0 1 0
chr8:22924714|22924947 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:22924714|22924947
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MLRVTLLGNQTFPASEIPQTRPAKPPTVPTLGSVAEWKEP
Nucleotide Sequence TTGTTAAGAGTAACGCTTCTCGGGAATCAGACCTTCCCTGCTTCTGAGATACCCCAGACAAGACCAGCAAAACCACCGACGGTCCCAACCCTGGGCTCAGTCGCAGAATGGAAAGAACCATGA

CircID chr8:22924714|22924947
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MLLRYPRQDQQNHRRSQPWAQSQNGKNHDSPNLQPGGESTQKTP
Nucleotide Sequence CTGCTTCTGAGATACCCCAGACAAGACCAGCAAAACCACCGACGGTCCCAACCCTGGGCTCAGTCGCAGAATGGAAAGAACCATGATTCTCCAAACCTGCAGCCAGGAGGTGAATCCACTCAAAAAACCCCA

CircID chr8:22924714|22924947
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence MAAGLENHGSFHSATEPRVGTVGGFAGLVWGISEAGKV
Nucleotide Sequence CTGGCTGCAGGTTTGGAGAATCATGGTTCTTTCCATTCTGCGACTGAGCCCAGGGTTGGGACCGTCGGTGGTTTTGCTGGTCTTGTCTGGGGTATCTCAGAAGCAGGGAAGGTCTGA

CircID chr8:22924714|22924947
ORF Type ORF4
Protein Length 74
Nucleotide Length 222
Protein Sequence MSGFTSWLQVWRIMVLSILRLSPGLGPSVVLLVLSGVSQKQGRSDSREALLLTMSHSLSQYIKFLPYRLIPLGI
Nucleotide Sequence TTGAGTGGATTCACCTCCTGGCTGCAGGTTTGGAGAATCATGGTTCTTTCCATTCTGCGACTGAGCCCAGGGTTGGGACCGTCGGTGGTTTTGCTGGTCTTGTCTGGGGTATCTCAGAAGCAGGGAAGGTCTGATTCCCGAGAAGCGTTACTCTTAACAATGTCTCACAGCTTGTCACAGTACATAAAATTCCTCCCTTATAGATTAATACCTTTAGGCATT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites