CircRNA Information

General Information
circRNA Basic Information
CircID chr8:23225805|23226123
Strand +
CircType exon
Host Gene ENSG00000246582.2;
Algorism CIRI2;
Sequence CCACTCCTCAGCCCCAAGGTCGCCCTGGGAGTTCTTCGCAGGCAGGACCGTGACTCGCGTGGCTTTCGGGAGGCTGATTACCCACGCCCCATGCCCGTGCAGCGCTGGGTGCAGAGGAACCGCTGGAAGGACCTGTCCCCCGTGGGACCCCCACCAAGTCTCATCCCGTGTCATGTGCCAGATAGTCTCCCGTGGTTTAAGGACTTTCAAGACTCTTAACAGGTTAGGAAAATCCAGAAGAAAGGCAGAATTGGGTCCCTCGGGCTTGCCTGACACCAGGGACGGTGGAGTTGAGGTGACATTTCACTGGCATGGAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:23225805|23226123 hsa-miR-136-5p 0 0 1
chr8:23225805|23226123 hsa-miR-136-3p 0 0 1
chr8:23225805|23226123 hsa-miR-384 0 0 1
chr8:23225805|23226123 hsa-miR-425-5p 0 0 1
chr8:23225805|23226123 hsa-miR-425-3p 0 0 1
chr8:23225805|23226123 hsa-miR-488-5p 0 0 1
chr8:23225805|23226123 hsa-miR-488-3p 0 0 1
chr8:23225805|23226123 hsa-miR-555 0 0 1
chr8:23225805|23226123 hsa-miR-602 0 1 1
chr8:23225805|23226123 hsa-miR-649 0 0 1
chr8:23225805|23226123 hsa-miR-662 0 0 1
chr8:23225805|23226123 hsa-miR-541-5p 0 0 1
chr8:23225805|23226123 hsa-miR-541-3p 0 0 1
chr8:23225805|23226123 hsa-miR-924 0 1 1
chr8:23225805|23226123 hsa-miR-1290 0 0 1
chr8:23225805|23226123 hsa-miR-1299 0 0 1
chr8:23225805|23226123 hsa-miR-1255a 0 0 1
chr8:23225805|23226123 hsa-miR-615-5p 0 1 1
chr8:23225805|23226123 hsa-miR-490-3p 0 0 1
chr8:23225805|23226123 hsa-miR-654-5p 0 0 1
chr8:23225805|23226123 hsa-miR-876-5p 0 0 1
chr8:23225805|23226123 hsa-miR-1255b 0 0 1
chr8:23225805|23226123 hsa-miR-1268 0 0 1
chr8:23225805|23226123 hsa-miR-516b 0 0 1
chr8:23225805|23226123 hsa-miR-203 0 0 1
chr8:23225805|23226123 hsa-miR-448 1 0 0
chr8:23225805|23226123 hsa-miR-1268a 1 1 0
chr8:23225805|23226123 hsa-miR-3188 1 0 0
chr8:23225805|23226123 hsa-miR-3196 1 0 0
chr8:23225805|23226123 hsa-miR-4260 0 1 0
chr8:23225805|23226123 hsa-miR-4326 0 1 0
chr8:23225805|23226123 hsa-miR-4269 1 0 0
chr8:23225805|23226123 hsa-miR-4281 1 0 0
chr8:23225805|23226123 hsa-miR-4292 1 0 0
chr8:23225805|23226123 hsa-miR-1268b 1 1 0
chr8:23225805|23226123 hsa-miR-4449 1 0 0
chr8:23225805|23226123 hsa-miR-4462 1 1 0
chr8:23225805|23226123 hsa-miR-4466 1 0 0
chr8:23225805|23226123 hsa-miR-4518 1 0 0
chr8:23225805|23226123 hsa-miR-3972 1 0 0
chr8:23225805|23226123 hsa-miR-4656 0 1 0
chr8:23225805|23226123 hsa-miR-6076 1 0 0
chr8:23225805|23226123 hsa-miR-150-3p 1 0 0
chr8:23225805|23226123 hsa-miR-6765-5p 1 0 0
chr8:23225805|23226123 hsa-miR-3622a-5p 1 0 0
chr8:23225805|23226123 hsa-miR-5187-5p 0 1 0
chr8:23225805|23226123 hsa-miR-3622b-5p 0 1 0
chr8:23225805|23226123 hsa-miR-1292-5p 1 0 0
chr8:23225805|23226123 hsa-miR-3180-3p 1 0 0
chr8:23225805|23226123 hsa-miR-185-3p 1 0 0
chr8:23225805|23226123 hsa-miR-4697-3p 1 0 0
chr8:23225805|23226123 hsa-miR-23a-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6798-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6810-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6786-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6784-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6753-5p 1 0 0
chr8:23225805|23226123 hsa-miR-5004-3p 0 1 0
chr8:23225805|23226123 hsa-miR-887-3p 1 0 0
chr8:23225805|23226123 hsa-miR-92b-5p 1 0 0
chr8:23225805|23226123 hsa-miR-4743-3p 0 1 0
chr8:23225805|23226123 hsa-miR-4787-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6717-5p 1 0 0
chr8:23225805|23226123 hsa-miR-3189-3p 0 1 0
chr8:23225805|23226123 hsa-miR-7112-5p 1 0 0
chr8:23225805|23226123 hsa-miR-4707-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6778-3p 0 1 0
chr8:23225805|23226123 hsa-miR-891a-3p 1 0 0
chr8:23225805|23226123 hsa-miR-203a-3p 0 1 0
chr8:23225805|23226123 hsa-miR-6738-3p 1 1 0
chr8:23225805|23226123 hsa-miR-2277-5p 1 0 0
chr8:23225805|23226123 hsa-miR-3126-3p 0 1 0
chr8:23225805|23226123 hsa-miR-3177-3p 1 0 0
chr8:23225805|23226123 hsa-miR-3675-5p 0 1 0
chr8:23225805|23226123 hsa-miR-5581-3p 0 1 0
chr8:23225805|23226123 hsa-miR-4763-3p 1 0 0
chr8:23225805|23226123 hsa-miR-6816-5p 1 0 0
chr8:23225805|23226123 hsa-miR-3180 1 0 0
chr8:23225805|23226123 hsa-miR-6737-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6743-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6752-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6756-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6803-5p 1 1 0
chr8:23225805|23226123 hsa-miR-7107-5p 1 0 0
chr8:23225805|23226123 hsa-miR-7110-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6875-5p 0 1 0
chr8:23225805|23226123 hsa-miR-1915-3p 1 1 0
chr8:23225805|23226123 hsa-miR-1909-3p 1 0 0
chr8:23225805|23226123 hsa-miR-328-5p 1 0 0
chr8:23225805|23226123 hsa-miR-4649-5p 1 0 0
chr8:23225805|23226123 hsa-miR-4685-5p 1 1 0
chr8:23225805|23226123 hsa-miR-6729-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6794-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6795-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6848-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6883-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6885-5p 1 0 0
chr8:23225805|23226123 hsa-miR-4665-5p 1 0 0
chr8:23225805|23226123 hsa-miR-6791-5p 0 1 0
chr8:23225805|23226123 hsa-miR-3059-5p 0 1 0
chr8:23225805|23226123 hsa-miR-5588-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:23225805|23226123
ORF Type ORF1
Protein Length 64
Nucleotide Length 195
Protein Sequence MGVLRRQDRDSRGFREADYPRPMPVQRWVQRNRWKDLSPVGPPPSLIPCHVPDSLPWFKDFQDS
Nucleotide Sequence CTGGGAGTTCTTCGCAGGCAGGACCGTGACTCGCGTGGCTTTCGGGAGGCTGATTACCCACGCCCCATGCCCGTGCAGCGCTGGGTGCAGAGGAACCGCTGGAAGGACCTGTCCCCCGTGGGACCCCCACCAAGTCTCATCCCGTGTCATGTGCCAGATAGTCTCCCGTGGTTTAAGGACTTTCAAGACTCTTAA

CircID chr8:23225805|23226123
ORF Type ORF2
Protein Length 82
Nucleotide Length 246
Protein Sequence MITHAPCPCSAGCRGTAGRTCPPWDPHQVSSRVMCQIVSRGLRTFKTLNRLGKSRRKAELGPSGLPDTRDGGVEVTFHWHGD
Nucleotide Sequence CTGATTACCCACGCCCCATGCCCGTGCAGCGCTGGGTGCAGAGGAACCGCTGGAAGGACCTGTCCCCCGTGGGACCCCCACCAAGTCTCATCCCGTGTCATGTGCCAGATAGTCTCCCGTGGTTTAAGGACTTTCAAGACTCTTAACAGGTTAGGAAAATCCAGAAGAAAGGCAGAATTGGGTCCCTCGGGCTTGCCTGACACCAGGGACGGTGGAGTTGAGGTGACATTTCACTGGCATGGAGAC

CircID chr8:23225805|23226123
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MGAEEPLEGPVPRGTPTKSHPVSCAR
Nucleotide Sequence CTGGGTGCAGAGGAACCGCTGGAAGGACCTGTCCCCCGTGGGACCCCCACCAAGTCTCATCCCGTGTCATGTGCCAGATAG

CircID chr8:23225805|23226123
ORF Type ORF4
Protein Length 29
Nucleotide Length 90
Protein Sequence MPVKCHLNSTVPGVRQARGTQFCLSSGFS
Nucleotide Sequence ATGCCAGTGAAATGTCACCTCAACTCCACCGTCCCTGGTGTCAGGCAAGCCCGAGGGACCCAATTCTGCCTTTCTTCTGGATTTTCCTAA

CircID chr8:23225805|23226123
ORF Type ORF5
Protein Length 49
Nucleotide Length 150
Protein Sequence MVGVPRGTGPSSGSSAPSAARAWGVGNQPPESHASHGPACEELPGRPWG
Nucleotide Sequence TTGGTGGGGGTCCCACGGGGGACAGGTCCTTCCAGCGGTTCCTCTGCACCCAGCGCTGCACGGGCATGGGGCGTGGGTAATCAGCCTCCCGAAAGCCACGCGAGTCACGGTCCTGCCTGCGAAGAACTCCCAGGGCGACCTTGGGGCTGA

CircID chr8:23225805|23226123
ORF Type ORF6
Protein Length 93
Nucleotide Length 279
Protein Sequence MVSGKPEGPNSAFLLDFPNLLRVLKVLKPRETIWHMTRDETWWGSHGGQVLPAVPLHPALHGHGAWVISLPKATRVTVLPAKNSQGDLGAEEW
Nucleotide Sequence CTGGTGTCAGGCAAGCCCGAGGGACCCAATTCTGCCTTTCTTCTGGATTTTCCTAACCTGTTAAGAGTCTTGAAAGTCCTTAAACCACGGGAGACTATCTGGCACATGACACGGGATGAGACTTGGTGGGGGTCCCACGGGGGACAGGTCCTTCCAGCGGTTCCTCTGCACCCAGCGCTGCACGGGCATGGGGCGTGGGTAATCAGCCTCCCGAAAGCCACGCGAGTCACGGTCCTGCCTGCGAAGAACTCCCAGGGCGACCTTGGGGCTGAGGAGTGG

CircID chr8:23225805|23226123
ORF Type ORF7
Protein Length 28
Nucleotide Length 87
Protein Sequence MSPQLHRPWCQASPRDPILPFFWIFLTC
Nucleotide Sequence ATGTCACCTCAACTCCACCGTCCCTGGTGTCAGGCAAGCCCGAGGGACCCAATTCTGCCTTTCTTCTGGATTTTCCTAACCTGTTAA

CircID chr8:23225805|23226123
ORF Type ORF8
Protein Length 28
Nucleotide Length 87
Protein Sequence MRLGGGPTGDRSFQRFLCTQRCTGMGRG
Nucleotide Sequence ATGAGACTTGGTGGGGGTCCCACGGGGGACAGGTCCTTCCAGCGGTTCCTCTGCACCCAGCGCTGCACGGGCATGGGGCGTGGGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites