CircRNA Information

General Information
circRNA Basic Information
CircID chr8:26380712|26380887
Strand +
CircType exon
Host Gene ENSG00000228451.3;
Algorism CIRI2;
Sequence TCTACAGAAGGAACATCTGGAATGATACCAAAACTGTCAATGTTATCACAACTGCATGTTTCTCTTAGGTCACCAAGATATTAGTTGCTGCTTTGACATTCTTTCTTGGAAAAGATGAAGATGAAAAACAGGCCAGTGACTCCGAATCTGAGGATGACGGACCAACAGCAAGAGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:26380712|26380887 hsa-miR-15a-5p 0 0 1
chr8:26380712|26380887 hsa-miR-15a-3p 0 0 1
chr8:26380712|26380887 hsa-miR-192-5p 0 0 1
chr8:26380712|26380887 hsa-miR-192-3p 0 0 1
chr8:26380712|26380887 hsa-miR-215-5p 0 0 1
chr8:26380712|26380887 hsa-miR-215-3p 0 0 1
chr8:26380712|26380887 hsa-miR-15b-5p 0 0 1
chr8:26380712|26380887 hsa-miR-15b-3p 0 0 1
chr8:26380712|26380887 hsa-miR-186-5p 0 0 1
chr8:26380712|26380887 hsa-miR-186-3p 0 0 1
chr8:26380712|26380887 hsa-miR-195-5p 0 0 1
chr8:26380712|26380887 hsa-miR-195-3p 0 0 1
chr8:26380712|26380887 hsa-miR-133b 0 0 1
chr8:26380712|26380887 hsa-miR-424-5p 0 0 1
chr8:26380712|26380887 hsa-miR-424-3p 0 0 1
chr8:26380712|26380887 hsa-miR-494-5p 0 0 1
chr8:26380712|26380887 hsa-miR-494-3p 0 0 1
chr8:26380712|26380887 hsa-miR-193b-5p 0 0 1
chr8:26380712|26380887 hsa-miR-193b-3p 0 0 1
chr8:26380712|26380887 hsa-miR-497-5p 0 0 1
chr8:26380712|26380887 hsa-miR-497-3p 0 0 1
chr8:26380712|26380887 hsa-miR-889-5p 0 0 1
chr8:26380712|26380887 hsa-miR-889-3p 0 0 1
chr8:26380712|26380887 hsa-miR-543 0 0 1
chr8:26380712|26380887 hsa-miR-1237-5p 0 0 1
chr8:26380712|26380887 hsa-miR-1237-3p 0 0 1
chr8:26380712|26380887 hsa-miR-1248 0 0 1
chr8:26380712|26380887 hsa-miR-525-5p 0 0 1
chr8:26380712|26380887 hsa-miR-330-3p 0 0 1
chr8:26380712|26380887 hsa-miR-520a-5p 0 0 1
chr8:26380712|26380887 hsa-miR-193a-3p 0 0 1
chr8:26380712|26380887 hsa-miR-16 0 0 1
chr8:26380712|26380887 hsa-miR-133a 0 0 1
chr8:26380712|26380887 hsa-miR-8075 1 0 0
chr8:26380712|26380887 hsa-miR-7107-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:26380712|26380887
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MTFFLGKDEDEKQASDSESEDDGPTARD
Nucleotide Sequence TTGACATTCTTTCTTGGAAAAGATGAAGATGAAAAACAGGCCAGTGACTCCGAATCTGAGGATGACGGACCAACAGCAAGAGAC

CircID chr8:26380712|26380887
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MLLVRHPQIRSHWPVFHLHLFQERMSKQQLISW
Nucleotide Sequence TTGCTGTTGGTCCGTCATCCTCAGATTCGGAGTCACTGGCCTGTTTTTCATCTTCATCTTTTCCAAGAAAGAATGTCAAAGCAGCAACTAATATCTTGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites