CircRNA Information

General Information
circRNA Basic Information
CircID chr8:26408013|26408300
Strand +
CircType exon
Host Gene ENSG00000104765.13;
Algorism CIRI2;
Sequence CCCCTTTCTTCATGGCTCCACTTTTCCTCATGCTTAAAGACACAGAACGTTTAGGGTGTCTGAAGTGGAACTCCCTGAGAAAGAAATTCAGAGGCAGATGTCATTTGCTGAAAATATCGTGGGGATTACCAGGCCCATTGCCTGTAAGCGTGCGCAGATCAACTGTGTCCACTGACAAGAAACATGTGAGAACTCACTTGGGTGGAATGTTTTCGGGTCTACTGGACCAGTCTGATACCCAGTCCGCACTTTTCTTCAAAGCCTCGACTTCCTTCTCTCCTTCTACAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:26408013|26408300 hsa-miR-17-5p 0 0 1
chr8:26408013|26408300 hsa-miR-17-3p 0 0 1
chr8:26408013|26408300 hsa-miR-20a-5p 0 0 1
chr8:26408013|26408300 hsa-miR-20a-3p 0 0 1
chr8:26408013|26408300 hsa-miR-93-5p 0 0 1
chr8:26408013|26408300 hsa-miR-93-3p 0 0 1
chr8:26408013|26408300 hsa-miR-106a-5p 0 0 1
chr8:26408013|26408300 hsa-miR-106a-3p 0 0 1
chr8:26408013|26408300 hsa-miR-223-5p 0 0 1
chr8:26408013|26408300 hsa-miR-223-3p 0 0 1
chr8:26408013|26408300 hsa-miR-185-5p 0 0 1
chr8:26408013|26408300 hsa-miR-185-3p 0 0 1
chr8:26408013|26408300 hsa-miR-106b-5p 0 0 1
chr8:26408013|26408300 hsa-miR-106b-3p 0 0 1
chr8:26408013|26408300 hsa-miR-20b-5p 0 0 1
chr8:26408013|26408300 hsa-miR-20b-3p 0 0 1
chr8:26408013|26408300 hsa-miR-489-5p 0 0 1
chr8:26408013|26408300 hsa-miR-489-3p 0 0 1
chr8:26408013|26408300 hsa-miR-511-5p 0 0 1
chr8:26408013|26408300 hsa-miR-511-3p 0 0 1
chr8:26408013|26408300 hsa-miR-519d-5p 0 0 1
chr8:26408013|26408300 hsa-miR-519d-3p 0 0 1
chr8:26408013|26408300 hsa-miR-545-5p 0 0 1
chr8:26408013|26408300 hsa-miR-545-3p 0 0 1
chr8:26408013|26408300 hsa-miR-570-5p 0 0 1
chr8:26408013|26408300 hsa-miR-570-3p 0 0 1
chr8:26408013|26408300 hsa-miR-578 0 0 1
chr8:26408013|26408300 hsa-miR-600 0 0 1
chr8:26408013|26408300 hsa-miR-411-5p 0 0 1
chr8:26408013|26408300 hsa-miR-411-3p 0 0 1
chr8:26408013|26408300 hsa-miR-543 0 0 1
chr8:26408013|26408300 hsa-miR-936 0 0 1
chr8:26408013|26408300 hsa-miR-1229-5p 0 0 1
chr8:26408013|26408300 hsa-miR-1229-3p 0 0 1
chr8:26408013|26408300 hsa-miR-1266-5p 0 0 1
chr8:26408013|26408300 hsa-miR-1266-3p 0 0 1
chr8:26408013|26408300 hsa-miR-1252-5p 0 0 1
chr8:26408013|26408300 hsa-miR-1252-3p 0 0 1
chr8:26408013|26408300 hsa-miR-1324 0 0 1
chr8:26408013|26408300 hsa-miR-770-5p 0 0 1
chr8:26408013|26408300 hsa-miR-361-5p 0 0 1
chr8:26408013|26408300 hsa-miR-342-3p 0 0 1
chr8:26408013|26408300 hsa-miR-765 1 0 0
chr8:26408013|26408300 hsa-miR-3154 1 0 0
chr8:26408013|26408300 hsa-miR-3185 1 0 0
chr8:26408013|26408300 hsa-miR-3188 1 0 0
chr8:26408013|26408300 hsa-miR-4270 1 0 0
chr8:26408013|26408300 hsa-miR-4450 1 0 0
chr8:26408013|26408300 hsa-miR-4476 1 0 0
chr8:26408013|26408300 hsa-miR-4510 1 0 0
chr8:26408013|26408300 hsa-miR-4516 1 0 0
chr8:26408013|26408300 hsa-miR-4533 1 0 0
chr8:26408013|26408300 hsa-miR-4689 1 0 0
chr8:26408013|26408300 hsa-miR-5192 1 0 0
chr8:26408013|26408300 hsa-miR-6090 1 0 0
chr8:26408013|26408300 hsa-miR-6127 1 0 0
chr8:26408013|26408300 hsa-miR-6133 1 0 0
chr8:26408013|26408300 hsa-miR-6165 1 0 0
chr8:26408013|26408300 hsa-miR-8085 1 0 0
chr8:26408013|26408300 hsa-miR-12120 1 0 0
chr8:26408013|26408300 hsa-miR-3150a-3p 1 0 0
chr8:26408013|26408300 hsa-miR-6894-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6510-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6833-5p 1 0 0
chr8:26408013|26408300 hsa-miR-7847-3p 1 0 0
chr8:26408013|26408300 hsa-miR-6746-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6730-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6727-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6871-5p 1 0 0
chr8:26408013|26408300 hsa-miR-3190-3p 1 0 0
chr8:26408013|26408300 hsa-miR-6760-5p 1 0 0
chr8:26408013|26408300 hsa-miR-3150b-3p 1 0 0
chr8:26408013|26408300 hsa-miR-6784-5p 1 0 0
chr8:26408013|26408300 hsa-miR-5001-3p 1 0 0
chr8:26408013|26408300 hsa-miR-3127-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6830-5p 1 0 0
chr8:26408013|26408300 hsa-miR-3162-5p 1 0 0
chr8:26408013|26408300 hsa-miR-7850-5p 1 0 0
chr8:26408013|26408300 hsa-miR-7846-3p 1 0 0
chr8:26408013|26408300 hsa-miR-598-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6859-3p 1 0 0
chr8:26408013|26408300 hsa-miR-4797-3p 1 0 0
chr8:26408013|26408300 hsa-miR-6775-5p 1 0 0
chr8:26408013|26408300 hsa-miR-11181-3p 1 0 0
chr8:26408013|26408300 hsa-miR-1249-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6797-5p 1 0 0
chr8:26408013|26408300 hsa-miR-5196-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6780b-5p 1 0 0
chr8:26408013|26408300 hsa-miR-10396a-5p 1 0 0
chr8:26408013|26408300 hsa-miR-10396b-5p 1 0 0
chr8:26408013|26408300 hsa-miR-4649-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6858-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6731-5p 1 0 0
chr8:26408013|26408300 hsa-miR-4747-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6876-5p 1 0 0
chr8:26408013|26408300 hsa-miR-6891-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:26408013|26408300
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MSFAENIVGITRPIACKRAQINCVH
Nucleotide Sequence ATGTCATTTGCTGAAAATATCGTGGGGATTACCAGGCCCATTGCCTGTAAGCGTGCGCAGATCAACTGTGTCCACTGA
CircID chr8:26408013|26408300
ORF Type ORF2
Protein Length 92
Nucleotide Length 276
Protein Sequence MAPLFLMLKDTERLGCLKWNSLRKKFRGRCHLLKISWGLPGPLPVSVRRSTVSTDKKHVRTHLGGMFSGLLDQSDTQSALFFKASTSFSPST
Nucleotide Sequence ATGGCTCCACTTTTCCTCATGCTTAAAGACACAGAACGTTTAGGGTGTCTGAAGTGGAACTCCCTGAGAAAGAAATTCAGAGGCAGATGTCATTTGCTGAAAATATCGTGGGGATTACCAGGCCCATTGCCTGTAAGCGTGCGCAGATCAACTGTGTCCACTGACAAGAAACATGTGAGAACTCACTTGGGTGGAATGTTTTCGGGTCTACTGGACCAGTCTGATACCCAGTCCGCACTTTTCTTCAAAGCCTCGACTTCCTTCTCTCCTTCTACA
CircID chr8:26408013|26408300
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MSVDTVDLRTLTGNGPGNPHDIFSK
Nucleotide Sequence TTGTCAGTGGACACAGTTGATCTGCGCACGCTTACAGGCAATGGGCCTGGTAATCCCCACGATATTTTCAGCAAATGA
CircID chr8:26408013|26408300
ORF Type ORF4
Protein Length 32
Nucleotide Length 96
Protein Sequence MPLNFFLREFHFRHPKRSVSLSMRKSGAMKKG
Nucleotide Sequence CTGCCTCTGAATTTCTTTCTCAGGGAGTTCCACTTCAGACACCCTAAACGTTCTGTGTCTTTAAGCATGAGGAAAAGTGGAGCCATGAAGAAAGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab