CircRNA Information

General Information
circRNA Basic Information
CircID chr8:26508003|26508166
Strand -
CircType exon
Host Gene ENSG00000240694.7;
Algorism CIRI2;
Sequence CTGGGCTGTCCTGCGGCTCTCTAGGCTCCCAAACACTTGCTTAAAGGCCTCCAAACACTCTTCTACACTGATGGACGGGTTGTCTGCCTGCACTATGTGCATGAGGTCCAGGGCAGGGCCCCGCAGGCTTTCCGCCAGCCACCTTTTCTTTTCTGCCTCTGTTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:26508003|26508166 hsa-miR-130a-5p 0 0 1
chr8:26508003|26508166 hsa-miR-130a-3p 0 0 1
chr8:26508003|26508166 hsa-miR-301a-5p 0 0 1
chr8:26508003|26508166 hsa-miR-301a-3p 0 0 1
chr8:26508003|26508166 hsa-miR-130b-5p 0 0 1
chr8:26508003|26508166 hsa-miR-130b-3p 0 0 1
chr8:26508003|26508166 hsa-miR-492 0 0 1
chr8:26508003|26508166 hsa-miR-596 0 1 1
chr8:26508003|26508166 hsa-miR-650 1 0 1
chr8:26508003|26508166 hsa-miR-454-5p 0 0 1
chr8:26508003|26508166 hsa-miR-454-3p 0 0 1
chr8:26508003|26508166 hsa-miR-874-5p 0 0 1
chr8:26508003|26508166 hsa-miR-874-3p 0 0 1
chr8:26508003|26508166 hsa-miR-744-5p 0 0 1
chr8:26508003|26508166 hsa-miR-744-3p 0 0 1
chr8:26508003|26508166 hsa-miR-301b-5p 0 0 1
chr8:26508003|26508166 hsa-miR-301b-3p 0 0 1
chr8:26508003|26508166 hsa-miR-920 0 0 1
chr8:26508003|26508166 hsa-miR-1286 0 0 1
chr8:26508003|26508166 hsa-miR-1291 0 1 1
chr8:26508003|26508166 hsa-miR-1247-5p 0 0 1
chr8:26508003|26508166 hsa-miR-1247-3p 0 0 1
chr8:26508003|26508166 hsa-miR-1827 0 0 1
chr8:26508003|26508166 hsa-miR-146b-3p 0 0 1
chr8:26508003|26508166 hsa-miR-768-5p 0 0 1
chr8:26508003|26508166 hsa-miR-602 1 0 0
chr8:26508003|26508166 hsa-miR-637 1 0 0
chr8:26508003|26508166 hsa-miR-298 1 0 0
chr8:26508003|26508166 hsa-miR-3197 1 0 0
chr8:26508003|26508166 hsa-miR-4257 1 0 0
chr8:26508003|26508166 hsa-miR-3612 1 0 0
chr8:26508003|26508166 hsa-miR-3911 1 0 0
chr8:26508003|26508166 hsa-miR-3916 1 0 0
chr8:26508003|26508166 hsa-miR-4498 1 0 0
chr8:26508003|26508166 hsa-miR-4657 1 0 0
chr8:26508003|26508166 hsa-miR-4688 1 0 0
chr8:26508003|26508166 hsa-miR-4734 0 1 0
chr8:26508003|26508166 hsa-miR-4739 1 0 0
chr8:26508003|26508166 hsa-miR-5090 1 0 0
chr8:26508003|26508166 hsa-miR-5787 1 0 0
chr8:26508003|26508166 hsa-miR-6090 1 0 0
chr8:26508003|26508166 hsa-miR-211-3p 1 0 0
chr8:26508003|26508166 hsa-miR-128-1-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6765-5p 1 0 0
chr8:26508003|26508166 hsa-miR-4687-3p 1 0 0
chr8:26508003|26508166 hsa-miR-6089 1 0 0
chr8:26508003|26508166 hsa-miR-4695-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6820-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6842-3p 1 0 0
chr8:26508003|26508166 hsa-miR-7845-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6827-5p 1 1 0
chr8:26508003|26508166 hsa-miR-6798-5p 1 0 0
chr8:26508003|26508166 hsa-miR-2467-3p 1 1 0
chr8:26508003|26508166 hsa-miR-5008-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6740-5p 0 1 0
chr8:26508003|26508166 hsa-miR-6847-5p 1 0 0
chr8:26508003|26508166 hsa-miR-3690 0 1 0
chr8:26508003|26508166 hsa-miR-6877-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6866-5p 1 0 0
chr8:26508003|26508166 hsa-miR-887-5p 0 1 0
chr8:26508003|26508166 hsa-miR-423-5p 1 0 0
chr8:26508003|26508166 hsa-miR-3173-5p 0 1 0
chr8:26508003|26508166 hsa-miR-6865-5p 0 1 0
chr8:26508003|26508166 hsa-miR-6893-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6726-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6743-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6815-5p 0 1 0
chr8:26508003|26508166 hsa-miR-1249-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6808-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6836-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6831-5p 1 0 0
chr8:26508003|26508166 hsa-miR-1910-3p 0 1 0
chr8:26508003|26508166 hsa-miR-6511a-5p 1 1 0
chr8:26508003|26508166 hsa-miR-6511b-5p 0 1 0
chr8:26508003|26508166 hsa-miR-3198 1 0 0
chr8:26508003|26508166 hsa-miR-6799-3p 0 1 0
chr8:26508003|26508166 hsa-miR-6791-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6762-5p 1 0 0
chr8:26508003|26508166 hsa-miR-6775-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:26508003|26508166
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MLKGLQTLFYTDGRVVCLHYVHEVQGRAPQAFRQPPFLFCLC
Nucleotide Sequence TTGCTTAAAGGCCTCCAAACACTCTTCTACACTGATGGACGGGTTGTCTGCCTGCACTATGTGCATGAGGTCCAGGGCAGGGCCCCGCAGGCTTTCCGCCAGCCACCTTTTCTTTTCTGCCTCTGT
CircID chr8:26508003|26508166
ORF Type ORF2
Protein Length 51
Nucleotide Length 153
Protein Sequence MRLSRLPNTCLKASKHSSTLMDGLSACTMCMRSRAGPRRLSASHLFFSASV
Nucleotide Sequence CTGCGGCTCTCTAGGCTCCCAAACACTTGCTTAAAGGCCTCCAAACACTCTTCTACACTGATGGACGGGTTGTCTGCCTGCACTATGTGCATGAGGTCCAGGGCAGGGCCCCGCAGGCTTTCCGCCAGCCACCTTTTCTTTTCTGCCTCTGTT
CircID chr8:26508003|26508166
ORF Type ORF3
Protein Length 46
Nucleotide Length 138
Protein Sequence MAESLRGPALDLMHIVQADNPSISVEECLEAFKQVFGSLESRRTAQ
Nucleotide Sequence CTGGCGGAAAGCCTGCGGGGCCCTGCCCTGGACCTCATGCACATAGTGCAGGCAGACAACCCGTCCATCAGTGTAGAAGAGTGTTTGGAGGCCTTTAAGCAAGTGTTTGGGAGCCTAGAGAGCCGCAGGACAGCCCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab