CircRNA Information

General Information
circRNA Basic Information
CircID chr8:27458616|27458820
Strand +
CircType exon
Host Gene ENSG00000120899.16;
Algorism CIRI2;
Sequence CTCCCCACCCCCAGGAGCCCCCTGCATGGACCAGGCTGGCTTAGGGAGCAGTGGCCAGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCTCTGTCCAGCTGCAGCCTGAGCAGTACAGCCAGGGGTAGGGGTGGGGAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGTGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:27458616|27458820 hsa-miR-204-5p 0 0 1
chr8:27458616|27458820 hsa-miR-204-3p 0 0 1
chr8:27458616|27458820 hsa-miR-211-5p 0 0 1
chr8:27458616|27458820 hsa-miR-211-3p 0 0 1
chr8:27458616|27458820 hsa-miR-326 0 0 1
chr8:27458616|27458820 hsa-miR-484 0 0 1
chr8:27458616|27458820 hsa-miR-507 0 0 1
chr8:27458616|27458820 hsa-miR-557 0 0 1
chr8:27458616|27458820 hsa-miR-588 0 0 1
chr8:27458616|27458820 hsa-miR-608 0 0 1
chr8:27458616|27458820 hsa-miR-612 0 1 1
chr8:27458616|27458820 hsa-miR-623 0 0 1
chr8:27458616|27458820 hsa-miR-637 1 0 1
chr8:27458616|27458820 hsa-miR-661 0 0 1
chr8:27458616|27458820 hsa-miR-1301-5p 0 0 1
chr8:27458616|27458820 hsa-miR-1301-3p 0 0 1
chr8:27458616|27458820 hsa-miR-939-5p 0 0 1
chr8:27458616|27458820 hsa-miR-939-3p 0 0 1
chr8:27458616|27458820 hsa-miR-1288-5p 0 0 1
chr8:27458616|27458820 hsa-miR-1288-3p 0 0 1
chr8:27458616|27458820 hsa-miR-491-5p 0 0 1
chr8:27458616|27458820 hsa-miR-1184 0 0 1
chr8:27458616|27458820 hsa-miR-1207-3p 0 0 1
chr8:27458616|27458820 hsa-miR-331-3p 0 0 1
chr8:27458616|27458820 hsa-miR-767-3p 0 0 1
chr8:27458616|27458820 hsa-miR-330-5p 0 1 1
chr8:27458616|27458820 hsa-miR-220c 0 0 1
chr8:27458616|27458820 hsa-miR-1285 0 0 1
chr8:27458616|27458820 hsa-miR-1254 0 0 1
chr8:27458616|27458820 hsa-miR-24 0 0 1
chr8:27458616|27458820 hsa-miR-638 1 0 0
chr8:27458616|27458820 hsa-miR-762 1 0 0
chr8:27458616|27458820 hsa-miR-760 1 1 0
chr8:27458616|27458820 hsa-miR-3937 1 0 0
chr8:27458616|27458820 hsa-miR-378g 1 1 0
chr8:27458616|27458820 hsa-miR-4462 1 0 0
chr8:27458616|27458820 hsa-miR-4515 1 0 0
chr8:27458616|27458820 hsa-miR-4522 0 1 0
chr8:27458616|27458820 hsa-miR-1587 1 0 0
chr8:27458616|27458820 hsa-miR-4539 1 0 0
chr8:27458616|27458820 hsa-miR-4651 0 1 0
chr8:27458616|27458820 hsa-miR-4656 1 0 0
chr8:27458616|27458820 hsa-miR-4674 1 0 0
chr8:27458616|27458820 hsa-miR-4721 1 0 0
chr8:27458616|27458820 hsa-miR-4741 1 0 0
chr8:27458616|27458820 hsa-miR-4780 1 0 0
chr8:27458616|27458820 hsa-miR-6132 1 0 0
chr8:27458616|27458820 hsa-miR-6860 1 0 0
chr8:27458616|27458820 hsa-miR-7974 1 1 0
chr8:27458616|27458820 hsa-miR-150-3p 1 0 0
chr8:27458616|27458820 hsa-miR-4731-5p 1 0 0
chr8:27458616|27458820 hsa-miR-212-5p 0 1 0
chr8:27458616|27458820 hsa-miR-6892-3p 0 1 0
chr8:27458616|27458820 hsa-miR-3064-5p 0 1 0
chr8:27458616|27458820 hsa-miR-24-3p 0 1 0
chr8:27458616|27458820 hsa-miR-6762-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6721-5p 1 0 0
chr8:27458616|27458820 hsa-miR-8069 1 0 0
chr8:27458616|27458820 hsa-miR-6849-3p 0 1 0
chr8:27458616|27458820 hsa-miR-7110-3p 0 1 0
chr8:27458616|27458820 hsa-miR-1915-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6845-3p 0 1 0
chr8:27458616|27458820 hsa-miR-659-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6793-5p 1 0 0
chr8:27458616|27458820 hsa-miR-877-3p 0 1 0
chr8:27458616|27458820 hsa-miR-185-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6829-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6732-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6805-5p 1 1 0
chr8:27458616|27458820 hsa-miR-23a-5p 0 1 0
chr8:27458616|27458820 hsa-miR-6798-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6882-3p 0 1 0
chr8:27458616|27458820 hsa-miR-3934-3p 1 1 0
chr8:27458616|27458820 hsa-miR-4763-5p 1 0 0
chr8:27458616|27458820 hsa-miR-4786-3p 0 1 0
chr8:27458616|27458820 hsa-miR-7111-3p 0 1 0
chr8:27458616|27458820 hsa-miR-4446-5p 1 0 0
chr8:27458616|27458820 hsa-miR-1306-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6786-3p 0 1 0
chr8:27458616|27458820 hsa-miR-194-3p 1 0 0
chr8:27458616|27458820 hsa-miR-3190-5p 0 1 0
chr8:27458616|27458820 hsa-miR-7152-3p 0 1 0
chr8:27458616|27458820 hsa-miR-4652-5p 0 1 0
chr8:27458616|27458820 hsa-miR-7106-3p 0 1 0
chr8:27458616|27458820 hsa-miR-4999-5p 0 1 0
chr8:27458616|27458820 hsa-miR-598-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6792-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6760-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6880-3p 1 1 0
chr8:27458616|27458820 hsa-miR-6734-3p 1 1 0
chr8:27458616|27458820 hsa-miR-3675-5p 1 0 0
chr8:27458616|27458820 hsa-miR-1249-3p 0 1 0
chr8:27458616|27458820 hsa-miR-6780b-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6800-3p 1 0 0
chr8:27458616|27458820 hsa-miR-3162-3p 0 1 0
chr8:27458616|27458820 hsa-miR-4520-3p 0 1 0
chr8:27458616|27458820 hsa-miR-10400-5p 1 0 0
chr8:27458616|27458820 hsa-miR-4763-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6865-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6752-5p 0 1 0
chr8:27458616|27458820 hsa-miR-6756-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6803-5p 1 1 0
chr8:27458616|27458820 hsa-miR-7110-5p 0 1 0
chr8:27458616|27458820 hsa-miR-6722-3p 1 1 0
chr8:27458616|27458820 hsa-miR-6751-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6779-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6808-5p 1 0 0
chr8:27458616|27458820 hsa-miR-3620-5p 1 0 0
chr8:27458616|27458820 hsa-miR-5189-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6836-5p 1 0 0
chr8:27458616|27458820 hsa-miR-10396a-5p 1 0 0
chr8:27458616|27458820 hsa-miR-1237-5p 1 0 0
chr8:27458616|27458820 hsa-miR-1909-3p 1 0 0
chr8:27458616|27458820 hsa-miR-328-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6794-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6846-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6848-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6885-5p 1 0 0
chr8:27458616|27458820 hsa-miR-1266-5p 1 1 0
chr8:27458616|27458820 hsa-miR-6511b-5p 1 0 0
chr8:27458616|27458820 hsa-miR-3116 1 0 0
chr8:27458616|27458820 hsa-miR-324-3p 0 1 0
chr8:27458616|27458820 hsa-miR-6791-5p 1 0 0
chr8:27458616|27458820 hsa-miR-6756-3p 1 0 0
chr8:27458616|27458820 hsa-miR-6784-3p 0 1 0
chr8:27458616|27458820 hsa-miR-10400-3p 1 0 0
chr8:27458616|27458820 hsa-miR-3085-3p 0 1 0
chr8:27458616|27458820 hsa-miR-4701-5p 0 1 0
chr8:27458616|27458820 hsa-miR-5006-3p 0 1 0
chr8:27458616|27458820 hsa-miR-6797-3p 1 1 0
chr8:27458616|27458820 hsa-miR-6504-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:27458616|27458820
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MHGPGWLREQWPGSSSPPLSHLCHRHPVSIAQSPLCPAAA
Nucleotide Sequence CTGCATGGACCAGGCTGGCTTAGGGAGCAGTGGCCAGGCAGCAGCAGTCCCCCTCTGAGCCATCTTTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCTCTGTCCAGCTGCAGCCTGA
CircID chr8:27458616|27458820
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MSPSPCVHSPESPLSSCSLSSTARGRGGERASCKVAREG
Nucleotide Sequence TTGTCACCGTCACCCTGTGTCCATAGCCCAGAGTCCCCTCTGTCCAGCTGCAGCCTGAGCAGTACAGCCAGGGGTAGGGGTGGGGAGAGGGCGTCGTGCAAAGTGGCAAGGGAAGGT
CircID chr8:27458616|27458820
ORF Type ORF3
Protein Length 48
Nucleotide Length 147
Protein Sequence MHDALSPPLPLAVLLRLQLDRGDSGLWTQGDGDKDGSEGDCCCLATAP
Nucleotide Sequence TTGCACGACGCCCTCTCCCCACCCCTACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCTGGCCACTGCTCCCTAA
CircID chr8:27458616|27458820
ORF Type ORF4
Protein Length 65
Nucleotide Length 195
Protein Sequence MPLCTTPSPHPYPWLYCSGCSWTEGTLGYGHRVTVTKMAQRGTAAAWPLLPKPAWSMQGAPGGGE
Nucleotide Sequence TTGCCACTTTGCACGACGCCCTCTCCCCACCCCTACCCCTGGCTGTACTGCTCAGGCTGCAGCTGGACAGAGGGGACTCTGGGCTATGGACACAGGGTGACGGTGACAAAGATGGCTCAGAGGGGGACTGCTGCTGCCTGGCCACTGCTCCCTAAGCCAGCCTGGTCCATGCAGGGGGCTCCTGGGGGTGGGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab