CircRNA Information

General Information
circRNA Basic Information
CircID chr8:27598232|27598575
Strand -
CircType exon
Host Gene ENSG00000120885.18;
Algorism CIRI2;
Sequence ATCCACATCTCACTCCTCCCGGTGCTTTTTGCGGTATTCCTGCAGCGCTTTCTCCGCCACGGTCTCCATAAATTTAGGGTTCTTCCTGGAGACTTCTACAGGGACCGTCACAGTGATGGGATCAGAGTCAAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:27598232|27598575 hsa-miR-143-5p 0 0 1
chr8:27598232|27598575 hsa-miR-143-3p 0 0 1
chr8:27598232|27598575 hsa-miR-518f-5p 0 0 1
chr8:27598232|27598575 hsa-miR-518f-3p 0 0 1
chr8:27598232|27598575 hsa-miR-518b 0 0 1
chr8:27598232|27598575 hsa-miR-518c-5p 0 0 1
chr8:27598232|27598575 hsa-miR-518c-3p 0 0 1
chr8:27598232|27598575 hsa-miR-518e-5p 0 0 1
chr8:27598232|27598575 hsa-miR-518e-3p 0 0 1
chr8:27598232|27598575 hsa-miR-766-5p 0 0 1
chr8:27598232|27598575 hsa-miR-766-3p 0 0 1
chr8:27598232|27598575 hsa-miR-765 0 1 1
chr8:27598232|27598575 hsa-miR-665 0 0 1
chr8:27598232|27598575 hsa-miR-1205 0 0 1
chr8:27598232|27598575 hsa-miR-1208 0 0 1
chr8:27598232|27598575 hsa-miR-1286 0 0 1
chr8:27598232|27598575 hsa-miR-339-5p 0 0 1
chr8:27598232|27598575 hsa-miR-576-3p 0 0 1
chr8:27598232|27598575 hsa-miR-513a-3p 0 0 1
chr8:27598232|27598575 hsa-miR-518a-3p 0 0 1
chr8:27598232|27598575 hsa-miR-518d-3p 0 0 1
chr8:27598232|27598575 hsa-miR-548b-3p 0 0 1
chr8:27598232|27598575 hsa-miR-1274a 0 0 1
chr8:27598232|27598575 hsa-miR-1274b 0 0 1
chr8:27598232|27598575 hsa-miR-650 1 0 0
chr8:27598232|27598575 hsa-miR-663a 1 0 0
chr8:27598232|27598575 hsa-miR-658 1 0 0
chr8:27598232|27598575 hsa-miR-1276 1 0 0
chr8:27598232|27598575 hsa-miR-3153 0 1 0
chr8:27598232|27598575 hsa-miR-3195 1 0 0
chr8:27598232|27598575 hsa-miR-3689c 0 1 0
chr8:27598232|27598575 hsa-miR-4669 1 0 0
chr8:27598232|27598575 hsa-miR-4689 1 0 0
chr8:27598232|27598575 hsa-miR-4706 1 0 0
chr8:27598232|27598575 hsa-miR-4721 1 0 0
chr8:27598232|27598575 hsa-miR-8060 1 0 0
chr8:27598232|27598575 hsa-miR-12128 1 0 0
chr8:27598232|27598575 hsa-miR-4433b-3p 0 1 0
chr8:27598232|27598575 hsa-miR-7106-5p 0 1 0
chr8:27598232|27598575 hsa-miR-6089 1 1 0
chr8:27598232|27598575 hsa-miR-3192-5p 1 0 0
chr8:27598232|27598575 hsa-miR-6880-5p 1 1 0
chr8:27598232|27598575 hsa-miR-6884-3p 0 1 0
chr8:27598232|27598575 hsa-miR-885-3p 1 0 0
chr8:27598232|27598575 hsa-miR-1908-5p 1 0 0
chr8:27598232|27598575 hsa-miR-652-5p 1 0 0
chr8:27598232|27598575 hsa-miR-6771-5p 1 0 0
chr8:27598232|27598575 hsa-miR-4746-5p 0 1 0
chr8:27598232|27598575 hsa-miR-3151-3p 0 1 0
chr8:27598232|27598575 hsa-miR-3192-3p 0 1 0
chr8:27598232|27598575 hsa-miR-181d-3p 1 1 0
chr8:27598232|27598575 hsa-miR-4714-5p 0 1 0
chr8:27598232|27598575 hsa-miR-1207-5p 1 0 0
chr8:27598232|27598575 hsa-miR-3689b-3p 0 1 0
chr8:27598232|27598575 hsa-miR-6778-5p 1 0 0
chr8:27598232|27598575 hsa-miR-6787-5p 1 0 0
chr8:27598232|27598575 hsa-miR-11181-3p 0 1 0
chr8:27598232|27598575 hsa-miR-3689a-3p 0 1 0
chr8:27598232|27598575 hsa-miR-6883-5p 0 1 0
chr8:27598232|27598575 hsa-miR-4646-5p 1 0 0
chr8:27598232|27598575 hsa-miR-10394-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:27598232|27598575
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MQRFLRHGLHKFRVLPGDFYRDRHSDGIRVKE
Nucleotide Sequence CTGCAGCGCTTTCTCCGCCACGGTCTCCATAAATTTAGGGTTCTTCCTGGAGACTTCTACAGGGACCGTCACAGTGATGGGATCAGAGTCAAAGAG

CircID chr8:27598232|27598575
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MRYSCSAFSATVSINLGFFLETSTGTVTVMGSESK
Nucleotide Sequence TTGCGGTATTCCTGCAGCGCTTTCTCCGCCACGGTCTCCATAAATTTAGGGTTCTTCCTGGAGACTTCTACAGGGACCGTCACAGTGATGGGATCAGAGTCAAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites