CircRNA Information

General Information
circRNA Basic Information
CircID chr8:27605025|27605171
Strand -
CircType exon
Host Gene ENSG00000120885.18;
Algorism CIRI2;
Sequence ATGGCGTGGAAGTTCAGGGGCTCGTACGGAGAGAAGGGCATCAAGCTGCGGACGATGCGGGACTTGGGAAAGAAGAAGTGAGGCCTCCGGTGGGGCAGGCTGAAGGGCAGGTAGTGGTAGGTATCCTGGGGCTCCCGGGTGAAGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:27605025|27605171 hsa-miR-412-5p 0 0 1
chr8:27605025|27605171 hsa-miR-412-3p 0 0 1
chr8:27605025|27605171 hsa-miR-596 1 1 1
chr8:27605025|27605171 hsa-miR-938 0 0 1
chr8:27605025|27605171 hsa-miR-942-5p 0 0 1
chr8:27605025|27605171 hsa-miR-942-3p 0 0 1
chr8:27605025|27605171 hsa-miR-1225-3p 1 1 1
chr8:27605025|27605171 hsa-miR-324-3p 1 0 1
chr8:27605025|27605171 hsa-miR-1280 0 0 1
chr8:27605025|27605171 hsa-miR-665 1 0 0
chr8:27605025|27605171 hsa-miR-1538 1 0 0
chr8:27605025|27605171 hsa-miR-1913 1 1 0
chr8:27605025|27605171 hsa-miR-3181 1 0 0
chr8:27605025|27605171 hsa-miR-4323 1 0 0
chr8:27605025|27605171 hsa-miR-3943 1 0 0
chr8:27605025|27605171 hsa-miR-4512 1 0 0
chr8:27605025|27605171 hsa-miR-9898 1 0 0
chr8:27605025|27605171 hsa-miR-22-5p 0 1 0
chr8:27605025|27605171 hsa-miR-18a-3p 1 1 0
chr8:27605025|27605171 hsa-miR-1247-3p 0 1 0
chr8:27605025|27605171 hsa-miR-6747-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4665-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4726-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6836-3p 1 0 0
chr8:27605025|27605171 hsa-miR-205-5p 1 0 0
chr8:27605025|27605171 hsa-miR-1233-3p 1 0 0
chr8:27605025|27605171 hsa-miR-486-5p 1 0 0
chr8:27605025|27605171 hsa-miR-7851-3p 0 1 0
chr8:27605025|27605171 hsa-miR-6840-5p 1 0 0
chr8:27605025|27605171 hsa-miR-3189-5p 1 0 0
chr8:27605025|27605171 hsa-miR-6845-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6827-5p 0 1 0
chr8:27605025|27605171 hsa-miR-6774-3p 1 0 0
chr8:27605025|27605171 hsa-miR-3691-3p 1 1 0
chr8:27605025|27605171 hsa-miR-4713-5p 1 0 0
chr8:27605025|27605171 hsa-miR-6884-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6772-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4793-5p 1 0 0
chr8:27605025|27605171 hsa-miR-4763-5p 1 1 0
chr8:27605025|27605171 hsa-miR-4707-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6894-3p 1 0 0
chr8:27605025|27605171 hsa-miR-7113-3p 1 0 0
chr8:27605025|27605171 hsa-miR-3667-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4783-5p 1 0 0
chr8:27605025|27605171 hsa-miR-4640-3p 1 0 0
chr8:27605025|27605171 hsa-miR-339-5p 1 0 0
chr8:27605025|27605171 hsa-miR-1289 0 1 0
chr8:27605025|27605171 hsa-miR-4707-5p 1 0 0
chr8:27605025|27605171 hsa-miR-1237-3p 1 0 0
chr8:27605025|27605171 hsa-miR-339-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4758-3p 1 1 0
chr8:27605025|27605171 hsa-miR-1914-5p 1 0 0
chr8:27605025|27605171 hsa-miR-6886-3p 1 1 0
chr8:27605025|27605171 hsa-miR-5088-3p 1 1 0
chr8:27605025|27605171 hsa-miR-1292-3p 1 0 0
chr8:27605025|27605171 hsa-miR-3124-3p 0 1 0
chr8:27605025|27605171 hsa-miR-3184-3p 1 1 0
chr8:27605025|27605171 hsa-miR-4433a-5p 1 0 0
chr8:27605025|27605171 hsa-miR-4750-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4433b-5p 1 0 0
chr8:27605025|27605171 hsa-miR-6812-3p 1 0 0
chr8:27605025|27605171 hsa-miR-1249-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6890-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6850-3p 1 0 0
chr8:27605025|27605171 hsa-miR-320a-5p 0 1 0
chr8:27605025|27605171 hsa-miR-6754-3p 1 0 0
chr8:27605025|27605171 hsa-miR-10396a-3p 1 0 0
chr8:27605025|27605171 hsa-miR-10396b-3p 1 0 0
chr8:27605025|27605171 hsa-miR-1199-5p 1 0 0
chr8:27605025|27605171 hsa-miR-4722-3p 1 1 0
chr8:27605025|27605171 hsa-miR-6727-3p 1 0 0
chr8:27605025|27605171 hsa-miR-193b-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6511b-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6819-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6823-3p 1 0 0
chr8:27605025|27605171 hsa-miR-6744-3p 1 0 0
chr8:27605025|27605171 hsa-miR-4768-5p 0 1 0
chr8:27605025|27605171 hsa-miR-3927-5p 1 1 0
chr8:27605025|27605171 hsa-miR-4999-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:27605025|27605171
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MAWKFRGSYGEKGIKLRTMRDLGKKK
Nucleotide Sequence ATGGCGTGGAAGTTCAGGGGCTCGTACGGAGAGAAGGGCATCAAGCTGCGGACGATGCGGGACTTGGGAAAGAAGAAGTGA
CircID chr8:27605025|27605171
ORF Type ORF2
Protein Length 36
Nucleotide Length 108
Protein Sequence MPFSLPHRRPHFFFPKSRIVRSLMPFSPYEPLNFHA
Nucleotide Sequence CTGCCCTTCAGCCTGCCCCACCGGAGGCCTCACTTCTTCTTTCCCAAGTCCCGCATCGTCCGCAGCTTGATGCCCTTCTCTCCGTACGAGCCCCTGAACTTCCACGCC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab