CircRNA Information

General Information
circRNA Basic Information
CircID chr8:27606376|27606507
Strand +
CircType exon
Host Gene ENSG00000120885.18;
Algorism CIRI2;
Sequence CAGGGAATCAGAGACAAAGCTGAAGGAGCTCCCAGGAGTGTGCAATGAGACCATGATGGCCCTCTGGGAAGAGTGTAAGCCCTGCCTGAAACAGACCTGCATGAAGTTCTACGCACGCGTCTGCAGAAGTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:27606376|27606507 hsa-miR-25-5p 0 0 1
chr8:27606376|27606507 hsa-miR-25-3p 0 0 1
chr8:27606376|27606507 hsa-miR-32-5p 0 0 1
chr8:27606376|27606507 hsa-miR-32-3p 0 0 1
chr8:27606376|27606507 hsa-miR-205-5p 0 0 1
chr8:27606376|27606507 hsa-miR-205-3p 0 0 1
chr8:27606376|27606507 hsa-miR-363-5p 0 0 1
chr8:27606376|27606507 hsa-miR-363-3p 0 0 1
chr8:27606376|27606507 hsa-miR-367-5p 0 0 1
chr8:27606376|27606507 hsa-miR-367-3p 0 0 1
chr8:27606376|27606507 hsa-miR-92b-5p 0 0 1
chr8:27606376|27606507 hsa-miR-92b-3p 0 0 1
chr8:27606376|27606507 hsa-miR-593-5p 0 0 1
chr8:27606376|27606507 hsa-miR-593-3p 0 0 1
chr8:27606376|27606507 hsa-miR-657 0 0 1
chr8:27606376|27606507 hsa-miR-920 0 0 1
chr8:27606376|27606507 hsa-miR-940 1 1 1
chr8:27606376|27606507 hsa-miR-1236-5p 0 0 1
chr8:27606376|27606507 hsa-miR-1236-3p 0 0 1
chr8:27606376|27606507 hsa-miR-1205 0 0 1
chr8:27606376|27606507 hsa-miR-1184 0 0 1
chr8:27606376|27606507 hsa-miR-1207-5p 1 0 1
chr8:27606376|27606507 hsa-miR-483-3p 0 0 1
chr8:27606376|27606507 hsa-miR-1274a 0 0 1
chr8:27606376|27606507 hsa-miR-544 0 0 1
chr8:27606376|27606507 hsa-miR-92a 0 0 1
chr8:27606376|27606507 hsa-miR-637 0 1 0
chr8:27606376|27606507 hsa-miR-658 1 0 0
chr8:27606376|27606507 hsa-miR-3621 1 0 0
chr8:27606376|27606507 hsa-miR-3665 1 0 0
chr8:27606376|27606507 hsa-miR-4465 1 0 0
chr8:27606376|27606507 hsa-miR-11399 1 0 0
chr8:27606376|27606507 hsa-miR-12127 1 0 0
chr8:27606376|27606507 hsa-miR-6765-5p 1 0 0
chr8:27606376|27606507 hsa-miR-27a-5p 0 1 0
chr8:27606376|27606507 hsa-miR-3192-5p 0 1 0
chr8:27606376|27606507 hsa-miR-659-3p 1 0 0
chr8:27606376|27606507 hsa-miR-6821-5p 1 0 0
chr8:27606376|27606507 hsa-miR-4640-5p 1 0 0
chr8:27606376|27606507 hsa-miR-6818-3p 0 1 0
chr8:27606376|27606507 hsa-miR-7112-5p 1 1 0
chr8:27606376|27606507 hsa-miR-3158-3p 0 1 0
chr8:27606376|27606507 hsa-miR-4529-5p 0 1 0
chr8:27606376|27606507 hsa-miR-3670 1 0 0
chr8:27606376|27606507 hsa-miR-4763-3p 1 1 0
chr8:27606376|27606507 hsa-miR-6808-5p 1 0 0
chr8:27606376|27606507 hsa-miR-4726-5p 1 0 0
chr8:27606376|27606507 hsa-miR-6511b-5p 1 0 0
chr8:27606376|27606507 hsa-miR-10398-3p 1 0 0
chr8:27606376|27606507 hsa-miR-2682-3p 1 0 0
chr8:27606376|27606507 hsa-miR-6753-3p 1 1 0
chr8:27606376|27606507 hsa-miR-7107-3p 1 0 0
chr8:27606376|27606507 hsa-miR-6783-3p 0 1 0
chr8:27606376|27606507 hsa-miR-6843-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:27606376|27606507
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence MKELPGVCNETMMALWEECKPCLKQTCMKFYARVCRS
Nucleotide Sequence CTGAAGGAGCTCCCAGGAGTGTGCAATGAGACCATGATGGCCCTCTGGGAAGAGTGTAAGCCCTGCCTGAAACAGACCTGCATGAAGTTCTACGCACGCGTCTGCAGAAGT

CircID chr8:27606376|27606507
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MQVCFRQGLHSSQRAIMVSLHTPGSSFSFVSDSL
Nucleotide Sequence ATGCAGGTCTGTTTCAGGCAGGGCTTACACTCTTCCCAGAGGGCCATCATGGTCTCATTGCACACTCCTGGGAGCTCCTTCAGCTTTGTCTCTGATTCCCTG

CircID chr8:27606376|27606507
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MFQAGLTLFPEGHHGLIAHSWELLQLCL
Nucleotide Sequence CTGTTTCAGGCAGGGCTTACACTCTTCCCAGAGGGCCATCATGGTCTCATTGCACACTCCTGGGAGCTCCTTCAGCTTTGTCTCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites