CircRNA Information

General Information
circRNA Basic Information
CircID chr8:37599309|37599497
Strand -
CircType exon
Host Gene ENSG00000254290.1;
Algorism CIRI2;
Sequence CCTTCATAGCTTTTTCCCGTCCCCTCCACTTGACCATGTGGGATGGCAGGGAATCCACACCCTCTTGGAACATCCCCTGTTTTGCTGATTGAAAAGAGATCCTAGAAACAGCACTACATCCAAGGTGAAGGAGGGGCCAGCCAGTCTCCTCTGGATGCCACCTCAGATGGGTTGCCTCAAGTTTAAGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:37599309|37599497 hsa-miR-205-5p 0 0 1
chr8:37599309|37599497 hsa-miR-205-3p 0 0 1
chr8:37599309|37599497 hsa-miR-412-5p 0 0 1
chr8:37599309|37599497 hsa-miR-412-3p 0 0 1
chr8:37599309|37599497 hsa-miR-520f-5p 0 0 1
chr8:37599309|37599497 hsa-miR-520f-3p 0 0 1
chr8:37599309|37599497 hsa-miR-545-5p 0 0 1
chr8:37599309|37599497 hsa-miR-545-3p 0 0 1
chr8:37599309|37599497 hsa-miR-892b 0 1 1
chr8:37599309|37599497 hsa-miR-1304-5p 0 0 1
chr8:37599309|37599497 hsa-miR-1304-3p 0 0 1
chr8:37599309|37599497 hsa-miR-1305 0 0 1
chr8:37599309|37599497 hsa-miR-548p 0 0 1
chr8:37599309|37599497 hsa-miR-1827 0 0 1
chr8:37599309|37599497 hsa-miR-512-3p 0 0 1
chr8:37599309|37599497 hsa-miR-525-5p 0 0 1
chr8:37599309|37599497 hsa-miR-188-3p 0 1 1
chr8:37599309|37599497 hsa-miR-520a-5p 0 0 1
chr8:37599309|37599497 hsa-miR-142-3p 0 0 1
chr8:37599309|37599497 hsa-miR-1274a 0 0 1
chr8:37599309|37599497 hsa-miR-3911 0 1 0
chr8:37599309|37599497 hsa-miR-4488 1 0 0
chr8:37599309|37599497 hsa-miR-4681 0 1 0
chr8:37599309|37599497 hsa-miR-4784 0 1 0
chr8:37599309|37599497 hsa-miR-8056 0 1 0
chr8:37599309|37599497 hsa-miR-12115 0 1 0
chr8:37599309|37599497 hsa-miR-12136 0 1 0
chr8:37599309|37599497 hsa-miR-6515-5p 0 1 0
chr8:37599309|37599497 hsa-miR-7847-3p 1 1 0
chr8:37599309|37599497 hsa-miR-6842-3p 0 1 0
chr8:37599309|37599497 hsa-miR-3180-3p 1 0 0
chr8:37599309|37599497 hsa-miR-6772-5p 1 0 0
chr8:37599309|37599497 hsa-miR-1908-5p 1 0 0
chr8:37599309|37599497 hsa-miR-92b-5p 1 1 0
chr8:37599309|37599497 hsa-miR-4717-3p 0 1 0
chr8:37599309|37599497 hsa-miR-6847-5p 0 1 0
chr8:37599309|37599497 hsa-miR-6878-3p 0 1 0
chr8:37599309|37599497 hsa-miR-4667-3p 0 1 0
chr8:37599309|37599497 hsa-miR-4446-5p 0 1 0
chr8:37599309|37599497 hsa-miR-149-3p 1 0 0
chr8:37599309|37599497 hsa-miR-6878-5p 0 1 0
chr8:37599309|37599497 hsa-miR-7162-3p 0 1 0
chr8:37599309|37599497 hsa-miR-6752-3p 0 1 0
chr8:37599309|37599497 hsa-miR-483-5p 1 0 0
chr8:37599309|37599497 hsa-miR-4749-3p 0 1 0
chr8:37599309|37599497 hsa-miR-3200-5p 0 1 0
chr8:37599309|37599497 hsa-miR-4740-3p 1 0 0
chr8:37599309|37599497 hsa-miR-6812-5p 0 1 0
chr8:37599309|37599497 hsa-miR-6865-5p 0 1 0
chr8:37599309|37599497 hsa-miR-6752-5p 1 0 0
chr8:37599309|37599497 hsa-miR-6815-5p 1 1 0
chr8:37599309|37599497 hsa-miR-7110-5p 0 1 0
chr8:37599309|37599497 hsa-miR-6797-5p 1 0 0
chr8:37599309|37599497 hsa-miR-4728-5p 1 0 0
chr8:37599309|37599497 hsa-miR-1237-5p 1 0 0
chr8:37599309|37599497 hsa-miR-6794-5p 1 0 0
chr8:37599309|37599497 hsa-miR-6795-5p 1 1 0
chr8:37599309|37599497 hsa-miR-6848-5p 1 0 0
chr8:37599309|37599497 hsa-miR-6744-3p 0 1 0
chr8:37599309|37599497 hsa-miR-4690-3p 0 1 0
chr8:37599309|37599497 hsa-miR-4769-3p 0 1 0
chr8:37599309|37599497 hsa-miR-876-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:37599309|37599497
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MKRDPRNSTTSKVKEGPASLLWMPPQMGCLKFK
Nucleotide Sequence TTGAAAAGAGATCCTAGAAACAGCACTACATCCAAGGTGAAGGAGGGGCCAGCCAGTCTCCTCTGGATGCCACCTCAGATGGGTTGCCTCAAGTTTAAG

CircID chr8:37599309|37599497
ORF Type ORF2
Protein Length 46
Nucleotide Length 141
Protein Sequence MAGPSFTLDVVLFLGSLFNQQNRGCSKRVWIPCHPTWSSGGDGKKL
Nucleotide Sequence CTGGCTGGCCCCTCCTTCACCTTGGATGTAGTGCTGTTTCTAGGATCTCTTTTCAATCAGCAAAACAGGGGATGTTCCAAGAGGGTGTGGATTCCCTGCCATCCCACATGGTCAAGTGGAGGGGACGGGAAAAAGCTATGA

CircID chr8:37599309|37599497
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MRWHPEETGWPLLHLGCSAVSRISFQSAKQGMFQEGVDSLPSHMVKWRGREKAMK
Nucleotide Sequence CTGAGGTGGCATCCAGAGGAGACTGGCTGGCCCCTCCTTCACCTTGGATGTAGTGCTGTTTCTAGGATCTCTTTTCAATCAGCAAAACAGGGGATGTTCCAAGAGGGTGTGGATTCCCTGCCATCCCACATGGTCAAGTGGAGGGGACGGGAAAAAGCTATGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites