CircRNA Information

General Information
circRNA Basic Information
CircID chr8:37755263|37755441
Strand +
CircType exon
Host Gene ENSG00000147475.13;
Algorism CIRI2;
Sequence CCATGGGCTATACAGGTTGGACACCCCCTACCCCTCAATCTCAGGATATAAGAAAAACCTTTTGTTCAAATTTGCTCTCCCCATCCTGAATCTCCCAAGGTGACTCAAAATGTTCTGACCTAGTAATGAAAAAGAAAACCCTTTGAATGGATTTTGGCACAGCCATTCCAACCTGGGGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr8:37755263|37755441
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MDTPYPSISGYKKNLLFKFALPILNLPR
Nucleotide Sequence TTGGACACCCCCTACCCCTCAATCTCAGGATATAAGAAAAACCTTTTGTTCAAATTTGCTCTCCCCATCCTGAATCTCCCAAGGTGA

CircID chr8:37755263|37755441
ORF Type ORF2
Protein Length 28
Nucleotide Length 87
Protein Sequence MGYTGWTPPTPQSQDIRKTFCSNLLSPS
Nucleotide Sequence ATGGGCTATACAGGTTGGACACCCCCTACCCCTCAATCTCAGGATATAAGAAAAACCTTTTGTTCAAATTTGCTCTCCCCATCCTGA

CircID chr8:37755263|37755441
ORF Type ORF3
Protein Length 41
Nucleotide Length 126
Protein Sequence MAVPKSIQRVFFFITRSEHFESPWEIQDGESKFEQKVFLIS
Nucleotide Sequence ATGGCTGTGCCAAAATCCATTCAAAGGGTTTTCTTTTTCATTACTAGGTCAGAACATTTTGAGTCACCTTGGGAGATTCAGGATGGGGAGAGCAAATTTGAACAAAAGGTTTTTCTTATATCCTGA

CircID chr8:37755263|37755441
ORF Type ORF4
Protein Length 47
Nucleotide Length 144
Protein Sequence MEWLCQNPFKGFSFSLLGQNILSHLGRFRMGRANLNKRFFLYPEIEG
Nucleotide Sequence TTGGAATGGCTGTGCCAAAATCCATTCAAAGGGTTTTCTTTTTCATTACTAGGTCAGAACATTTTGAGTCACCTTGGGAGATTCAGGATGGGGAGAGCAAATTTGAACAAAAGGTTTTTCTTATATCCTGAGATTGAGGGGTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites