CircRNA Information

General Information
circRNA Basic Information
CircID chr8:37834148|37834291
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTCTCCTTAGCACTGCCCCTGACAACTTGGAAGTGAACCCCATGGCTCAGAACTTTGTCACGTCTGCTGCTCTTGCTAGCTGGGGCACGGCAGGTGCACGCCTGAGAGGGAGCGCCTCCCTCCTCTGCATGCCAGGGCCACCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:37834148|37834291 hsa-miR-15a-5p 0 0 1
chr8:37834148|37834291 hsa-miR-15a-3p 0 0 1
chr8:37834148|37834291 hsa-miR-34a-5p 0 0 1
chr8:37834148|37834291 hsa-miR-34a-3p 0 0 1
chr8:37834148|37834291 hsa-miR-15b-5p 0 0 1
chr8:37834148|37834291 hsa-miR-15b-3p 0 0 1
chr8:37834148|37834291 hsa-miR-195-5p 0 0 1
chr8:37834148|37834291 hsa-miR-195-3p 0 0 1
chr8:37834148|37834291 hsa-miR-382-5p 0 0 1
chr8:37834148|37834291 hsa-miR-382-3p 0 0 1
chr8:37834148|37834291 hsa-miR-328-5p 0 0 1
chr8:37834148|37834291 hsa-miR-328-3p 0 0 1
chr8:37834148|37834291 hsa-miR-335-5p 0 0 1
chr8:37834148|37834291 hsa-miR-335-3p 0 0 1
chr8:37834148|37834291 hsa-miR-424-5p 0 0 1
chr8:37834148|37834291 hsa-miR-424-3p 0 0 1
chr8:37834148|37834291 hsa-miR-449a 0 0 1
chr8:37834148|37834291 hsa-miR-497-5p 0 0 1
chr8:37834148|37834291 hsa-miR-497-3p 0 0 1
chr8:37834148|37834291 hsa-miR-608 0 1 1
chr8:37834148|37834291 hsa-miR-621 0 1 1
chr8:37834148|37834291 hsa-miR-449b-5p 0 0 1
chr8:37834148|37834291 hsa-miR-449b-3p 0 0 1
chr8:37834148|37834291 hsa-miR-922 0 0 1
chr8:37834148|37834291 hsa-miR-663b 1 1 1
chr8:37834148|37834291 hsa-miR-1291 0 1 1
chr8:37834148|37834291 hsa-miR-1266-5p 0 0 1
chr8:37834148|37834291 hsa-miR-1266-3p 0 0 1
chr8:37834148|37834291 hsa-miR-1321 0 0 1
chr8:37834148|37834291 hsa-miR-486-3p 0 0 1
chr8:37834148|37834291 hsa-miR-34c-5p 0 0 1
chr8:37834148|37834291 hsa-miR-642 0 0 1
chr8:37834148|37834291 hsa-miR-16 0 0 1
chr8:37834148|37834291 hsa-miR-298 0 1 0
chr8:37834148|37834291 hsa-miR-2278 0 1 0
chr8:37834148|37834291 hsa-miR-4469 0 1 0
chr8:37834148|37834291 hsa-miR-4688 0 1 0
chr8:37834148|37834291 hsa-miR-4767 1 0 0
chr8:37834148|37834291 hsa-miR-6133 0 1 0
chr8:37834148|37834291 hsa-miR-6863 1 1 0
chr8:37834148|37834291 hsa-miR-8073 0 1 0
chr8:37834148|37834291 hsa-miR-323a-5p 1 0 0
chr8:37834148|37834291 hsa-miR-6807-5p 1 0 0
chr8:37834148|37834291 hsa-miR-6820-5p 1 0 0
chr8:37834148|37834291 hsa-miR-3187-3p 1 0 0
chr8:37834148|37834291 hsa-miR-148a-5p 0 1 0
chr8:37834148|37834291 hsa-miR-2467-3p 0 1 0
chr8:37834148|37834291 hsa-miR-103a-3p 1 0 0
chr8:37834148|37834291 hsa-miR-937-5p 1 0 0
chr8:37834148|37834291 hsa-miR-4707-5p 1 0 0
chr8:37834148|37834291 hsa-miR-6804-3p 0 1 0
chr8:37834148|37834291 hsa-miR-628-3p 1 1 0
chr8:37834148|37834291 hsa-miR-3157-3p 0 1 0
chr8:37834148|37834291 hsa-miR-642a-5p 0 1 0
chr8:37834148|37834291 hsa-miR-221-5p 0 1 0
chr8:37834148|37834291 hsa-miR-4763-3p 1 0 0
chr8:37834148|37834291 hsa-miR-6743-5p 0 1 0
chr8:37834148|37834291 hsa-miR-6756-5p 1 0 0
chr8:37834148|37834291 hsa-miR-1249-5p 0 1 0
chr8:37834148|37834291 hsa-miR-6797-5p 0 1 0
chr8:37834148|37834291 hsa-miR-1909-3p 1 1 0
chr8:37834148|37834291 hsa-miR-4632-5p 1 0 0
chr8:37834148|37834291 hsa-miR-1199-5p 1 0 0
chr8:37834148|37834291 hsa-miR-6791-5p 1 0 0
chr8:37834148|37834291 hsa-miR-550a-5p 1 0 0
chr8:37834148|37834291 hsa-miR-4756-5p 1 1 0
chr8:37834148|37834291 hsa-miR-33b-3p 1 0 0
chr8:37834148|37834291 hsa-miR-6500-5p 1 0 0
chr8:37834148|37834291 hsa-miR-6838-5p 0 1 0
chr8:37834148|37834291 hsa-miR-5588-5p 0 1 0
chr8:37834148|37834291 hsa-miR-525-3p 0 1 0
chr8:37834148|37834291 hsa-miR-4799-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:37834148|37834291
ORF Type ORF1
Protein Length 39
Nucleotide Length 117
Protein Sequence MEVNPMAQNFVTSAALASWGTAGARLRGSASLLCMPGPP
Nucleotide Sequence TTGGAAGTGAACCCCATGGCTCAGAACTTTGTCACGTCTGCTGCTCTTGCTAGCTGGGGCACGGCAGGTGCACGCCTGAGAGGGAGCGCCTCCCTCCTCTGCATGCCAGGGCCACCC
CircID chr8:37834148|37834291
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MQRREALPLRRAPAVPQLARAADVTKF
Nucleotide Sequence ATGCAGAGGAGGGAGGCGCTCCCTCTCAGGCGTGCACCTGCCGTGCCCCAGCTAGCAAGAGCAGCAGACGTGACAAAGTTCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab