CircRNA Information

General Information
circRNA Basic Information
CircID chr8:37843461|37843703
Strand +
CircType exon
Host Gene ENSG00000020181.16;
Algorism CIRI2;
Sequence CCATTCCAAGGAGTGTGTGTGGGTTTTCCCCCTCCCCTGTGTCCTCTGTCACCTTGGTGATGAGGCCAGAGTGATGTGAAGACTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGGGAAAAGACGGGTGCTGGTGTTTAAAAGGAGTAAAGGCATAGGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:37843461|37843703 hsa-miR-23a-5p 0 0 1
chr8:37843461|37843703 hsa-miR-23a-3p 0 0 1
chr8:37843461|37843703 hsa-miR-192-5p 0 0 1
chr8:37843461|37843703 hsa-miR-192-3p 0 0 1
chr8:37843461|37843703 hsa-miR-215-5p 0 0 1
chr8:37843461|37843703 hsa-miR-215-3p 0 0 1
chr8:37843461|37843703 hsa-miR-23b-5p 0 0 1
chr8:37843461|37843703 hsa-miR-23b-3p 0 0 1
chr8:37843461|37843703 hsa-miR-206 0 0 1
chr8:37843461|37843703 hsa-miR-412-5p 0 0 1
chr8:37843461|37843703 hsa-miR-412-3p 0 0 1
chr8:37843461|37843703 hsa-miR-603 0 0 1
chr8:37843461|37843703 hsa-miR-613 0 0 1
chr8:37843461|37843703 hsa-miR-625-5p 0 0 1
chr8:37843461|37843703 hsa-miR-625-3p 0 0 1
chr8:37843461|37843703 hsa-miR-634 0 1 1
chr8:37843461|37843703 hsa-miR-635 0 0 1
chr8:37843461|37843703 hsa-miR-1226-5p 0 0 1
chr8:37843461|37843703 hsa-miR-1226-3p 0 0 1
chr8:37843461|37843703 hsa-miR-1197 0 0 1
chr8:37843461|37843703 hsa-miR-296-3p 0 0 1
chr8:37843461|37843703 hsa-miR-193a-5p 0 0 1
chr8:37843461|37843703 hsa-miR-532-5p 0 0 1
chr8:37843461|37843703 hsa-miR-338-3p 0 0 1
chr8:37843461|37843703 hsa-miR-483-3p 0 0 1
chr8:37843461|37843703 hsa-miR-542-3p 0 0 1
chr8:37843461|37843703 hsa-miR-642 0 0 1
chr8:37843461|37843703 hsa-miR-220c 0 0 1
chr8:37843461|37843703 hsa-miR-1 0 0 1
chr8:37843461|37843703 hsa-miR-499-3p 0 0 1
chr8:37843461|37843703 hsa-miR-1182 1 1 0
chr8:37843461|37843703 hsa-miR-3175 1 0 0
chr8:37843461|37843703 hsa-miR-3176 0 1 0
chr8:37843461|37843703 hsa-miR-4271 1 0 0
chr8:37843461|37843703 hsa-miR-4739 1 0 0
chr8:37843461|37843703 hsa-miR-6072 0 1 0
chr8:37843461|37843703 hsa-miR-9500 1 0 0
chr8:37843461|37843703 hsa-miR-3150a-3p 1 0 0
chr8:37843461|37843703 hsa-miR-7106-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6825-5p 0 1 0
chr8:37843461|37843703 hsa-miR-766-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6746-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6768-5p 0 1 0
chr8:37843461|37843703 hsa-miR-4786-3p 0 1 0
chr8:37843461|37843703 hsa-miR-6847-5p 0 1 0
chr8:37843461|37843703 hsa-miR-642b-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6824-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6776-3p 0 1 0
chr8:37843461|37843703 hsa-miR-6826-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6871-3p 0 1 0
chr8:37843461|37843703 hsa-miR-589-3p 1 0 0
chr8:37843461|37843703 hsa-miR-1273h-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6778-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6865-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6763-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6779-5p 1 0 0
chr8:37843461|37843703 hsa-miR-6780a-5p 1 0 0
chr8:37843461|37843703 hsa-miR-4728-5p 0 1 0
chr8:37843461|37843703 hsa-miR-5196-5p 1 0 0
chr8:37843461|37843703 hsa-miR-3679-5p 0 1 0
chr8:37843461|37843703 hsa-miR-4646-5p 1 0 0
chr8:37843461|37843703 hsa-miR-4747-5p 1 0 0
chr8:37843461|37843703 hsa-miR-4716-3p 0 1 0
chr8:37843461|37843703 hsa-miR-6750-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6791-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6822-5p 0 1 0
chr8:37843461|37843703 hsa-miR-11181-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6529-3p 0 1 0
chr8:37843461|37843703 hsa-miR-10394-5p 0 1 0
chr8:37843461|37843703 hsa-miR-6824-3p 0 1 0
chr8:37843461|37843703 hsa-miR-3922-3p 0 1 0
chr8:37843461|37843703 hsa-miR-7157-5p 0 1 0
chr8:37843461|37843703 hsa-miR-499b-3p 0 1 0
chr8:37843461|37843703 hsa-miR-548as-3p 0 1 0
chr8:37843461|37843703 hsa-miR-202-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr8:37843461|37843703
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MGGNPRSDLGFLLFFPRPRVPSVSIWSCSEMLVVGFRLGKRRVLVFKRSKGIG
Nucleotide Sequence CTGGGAGGGAACCCTAGGTCAGACCTTGGTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGGGAAAAGACGGGTGCTGGTGTTTAAAAGGAGTAAAGGCATAGGC
CircID chr8:37843461|37843703
ORF Type ORF2
Protein Length 43
Nucleotide Length 132
Protein Sequence MVSCCSSQDPGFPRFPFGPVVKCWWLVLGWGKDGCWCLKGVKA
Nucleotide Sequence TTGGTTTCCTGTTGTTCTTCCCAAGACCCAGGGTTCCCTCGGTTTCCATTTGGTCCTGTAGTGAAATGCTGGTGGTTGGTTTTAGGTTGGGGAAAAGACGGGTGCTGGTGTTTAAAAGGAGTAAAGGCATAG
CircID chr8:37843461|37843703
ORF Type ORF3
Protein Length 62
Nucleotide Length 189
Protein Sequence MPLLLLNTSTRLFPNLKPTTSISLQDQMETEGTLGLGKNNRKPRSDLGFPPSLHITLASSPR
Nucleotide Sequence ATGCCTTTACTCCTTTTAAACACCAGCACCCGTCTTTTCCCCAACCTAAAACCAACCACCAGCATTTCACTACAGGACCAAATGGAAACCGAGGGAACCCTGGGTCTTGGGAAGAACAACAGGAAACCAAGGTCTGACCTAGGGTTCCCTCCCAGTCTTCACATCACTCTGGCCTCATCACCAAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab