CircRNA Information

General Information
circRNA Basic Information
CircID chr8:37859349|37859689
Strand -
CircType exon
Host Gene ENSG00000156675.14;
Algorism CIRI2;
Sequence CTTCCTCCCTCTGCCCCGTTGAGCTCCCACTGTTAGCAAAACTGAGAAGCACATGCCTGTGTCTTCTTCATACCGGCATGTGCACACACACCTGTATCTCCTTCATACAGGCATATGCAGAGCCCTCACCAATCGGGGTCCACAGCTGTTCAGTATGGCAAAGGGCAGACTTACTCCTTCATCCACTCTGCTGCCTTGATGAGGTGAACACACTGGAATAAGATGGAGGGCAGGATACCTGCCAAAGCCTGAGGCATGAGATGATCTGAAACAATTGGGCAAAGGCTGGACATTTCAAAAAGCTGACTTCCAACTGCAGTTTATGGGTATAGAATTTGATG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:37859349|37859689 hsa-miR-95-5p 0 0 1
chr8:37859349|37859689 hsa-miR-95-3p 0 0 1
chr8:37859349|37859689 hsa-miR-96-5p 0 0 1
chr8:37859349|37859689 hsa-miR-96-3p 0 0 1
chr8:37859349|37859689 hsa-miR-198 0 0 1
chr8:37859349|37859689 hsa-miR-182-5p 0 0 1
chr8:37859349|37859689 hsa-miR-182-3p 0 0 1
chr8:37859349|37859689 hsa-miR-212-5p 0 0 1
chr8:37859349|37859689 hsa-miR-212-3p 0 0 1
chr8:37859349|37859689 hsa-miR-132-5p 0 0 1
chr8:37859349|37859689 hsa-miR-132-3p 0 0 1
chr8:37859349|37859689 hsa-miR-346 1 1 1
chr8:37859349|37859689 hsa-miR-448 0 0 1
chr8:37859349|37859689 hsa-miR-484 0 0 1
chr8:37859349|37859689 hsa-miR-552-5p 0 0 1
chr8:37859349|37859689 hsa-miR-552-3p 0 0 1
chr8:37859349|37859689 hsa-miR-636 0 0 1
chr8:37859349|37859689 hsa-miR-660-5p 0 0 1
chr8:37859349|37859689 hsa-miR-660-3p 0 0 1
chr8:37859349|37859689 hsa-miR-1264 0 0 1
chr8:37859349|37859689 hsa-miR-1271-5p 0 0 1
chr8:37859349|37859689 hsa-miR-1271-3p 0 0 1
chr8:37859349|37859689 hsa-miR-760 0 1 1
chr8:37859349|37859689 hsa-miR-920 1 0 1
chr8:37859349|37859689 hsa-miR-922 0 1 1
chr8:37859349|37859689 hsa-miR-938 0 0 1
chr8:37859349|37859689 hsa-miR-1255a 0 0 1
chr8:37859349|37859689 hsa-miR-548g-5p 0 0 1
chr8:37859349|37859689 hsa-miR-548g-3p 0 0 1
chr8:37859349|37859689 hsa-miR-1284 0 0 1
chr8:37859349|37859689 hsa-miR-1252-5p 0 0 1
chr8:37859349|37859689 hsa-miR-1252-3p 0 0 1
chr8:37859349|37859689 hsa-miR-1321 0 0 1
chr8:37859349|37859689 hsa-miR-1825 0 0 1
chr8:37859349|37859689 hsa-miR-145-5p 0 0 1
chr8:37859349|37859689 hsa-miR-486-3p 0 0 1
chr8:37859349|37859689 hsa-miR-199a-5p 0 0 1
chr8:37859349|37859689 hsa-miR-532-5p 0 0 1
chr8:37859349|37859689 hsa-miR-509-3p 0 0 1
chr8:37859349|37859689 hsa-miR-199b-5p 0 0 1
chr8:37859349|37859689 hsa-miR-1207-5p 0 0 1
chr8:37859349|37859689 hsa-miR-324-3p 0 0 1
chr8:37859349|37859689 hsa-miR-509-3-5p 0 0 1
chr8:37859349|37859689 hsa-miR-509-5p 0 0 1
chr8:37859349|37859689 hsa-miR-1255b 0 0 1
chr8:37859349|37859689 hsa-miR-218 0 0 1
chr8:37859349|37859689 hsa-miR-203 0 0 1
chr8:37859349|37859689 hsa-miR-613 0 1 0
chr8:37859349|37859689 hsa-miR-637 1 0 0
chr8:37859349|37859689 hsa-miR-3139 1 0 0
chr8:37859349|37859689 hsa-miR-3185 1 1 0
chr8:37859349|37859689 hsa-miR-4300 1 0 0
chr8:37859349|37859689 hsa-miR-4322 1 0 0
chr8:37859349|37859689 hsa-miR-4290 0 1 0
chr8:37859349|37859689 hsa-miR-3650 0 1 0
chr8:37859349|37859689 hsa-miR-3714 0 1 0
chr8:37859349|37859689 hsa-miR-4437 1 0 0
chr8:37859349|37859689 hsa-miR-4510 0 1 0
chr8:37859349|37859689 hsa-miR-4533 1 0 0
chr8:37859349|37859689 hsa-miR-4534 1 0 0
chr8:37859349|37859689 hsa-miR-4648 1 0 0
chr8:37859349|37859689 hsa-miR-4654 1 0 0
chr8:37859349|37859689 hsa-miR-4710 0 1 0
chr8:37859349|37859689 hsa-miR-4721 1 1 0
chr8:37859349|37859689 hsa-miR-4736 0 1 0
chr8:37859349|37859689 hsa-miR-4739 1 1 0
chr8:37859349|37859689 hsa-miR-5090 0 1 0
chr8:37859349|37859689 hsa-miR-5100 0 1 0
chr8:37859349|37859689 hsa-miR-5694 0 1 0
chr8:37859349|37859689 hsa-miR-5705 1 0 0
chr8:37859349|37859689 hsa-miR-6090 1 0 0
chr8:37859349|37859689 hsa-miR-6133 0 1 0
chr8:37859349|37859689 hsa-miR-17-3p 0 1 0
chr8:37859349|37859689 hsa-miR-4433b-3p 1 0 0
chr8:37859349|37859689 hsa-miR-18a-3p 0 1 0
chr8:37859349|37859689 hsa-miR-504-3p 1 0 0
chr8:37859349|37859689 hsa-miR-6747-3p 1 0 0
chr8:37859349|37859689 hsa-miR-766-3p 1 0 0
chr8:37859349|37859689 hsa-miR-6510-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6867-5p 0 1 0
chr8:37859349|37859689 hsa-miR-4653-3p 1 0 0
chr8:37859349|37859689 hsa-miR-6741-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6759-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6849-3p 1 1 0
chr8:37859349|37859689 hsa-miR-6827-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6798-5p 1 0 0
chr8:37859349|37859689 hsa-miR-2467-3p 0 1 0
chr8:37859349|37859689 hsa-miR-6786-5p 1 0 0
chr8:37859349|37859689 hsa-miR-5088-5p 1 1 0
chr8:37859349|37859689 hsa-miR-1226-5p 1 1 0
chr8:37859349|37859689 hsa-miR-3691-5p 0 1 0
chr8:37859349|37859689 hsa-miR-885-3p 1 1 0
chr8:37859349|37859689 hsa-miR-5585-3p 1 1 0
chr8:37859349|37859689 hsa-miR-4776-5p 1 0 0
chr8:37859349|37859689 hsa-miR-4724-5p 0 1 0
chr8:37859349|37859689 hsa-miR-4776-3p 0 1 0
chr8:37859349|37859689 hsa-miR-4727-3p 1 0 0
chr8:37859349|37859689 hsa-miR-4774-5p 0 1 0
chr8:37859349|37859689 hsa-miR-6738-3p 0 1 0
chr8:37859349|37859689 hsa-miR-1296-3p 1 0 0
chr8:37859349|37859689 hsa-miR-4283 1 0 0
chr8:37859349|37859689 hsa-miR-6759-3p 1 0 0
chr8:37859349|37859689 hsa-miR-1233-5p 1 1 0
chr8:37859349|37859689 hsa-miR-1273h-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6769b-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6778-5p 1 1 0
chr8:37859349|37859689 hsa-miR-6775-5p 0 1 0
chr8:37859349|37859689 hsa-miR-6726-5p 1 0 0
chr8:37859349|37859689 hsa-miR-1249-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6779-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6788-5p 1 0 0
chr8:37859349|37859689 hsa-miR-4632-5p 1 0 0
chr8:37859349|37859689 hsa-miR-4745-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6846-5p 1 1 0
chr8:37859349|37859689 hsa-miR-6848-5p 1 0 0
chr8:37859349|37859689 hsa-miR-3187-5p 1 0 0
chr8:37859349|37859689 hsa-miR-4723-5p 1 0 0
chr8:37859349|37859689 hsa-miR-939-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6736-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6877-3p 1 0 0
chr8:37859349|37859689 hsa-miR-6766-5p 1 0 0
chr8:37859349|37859689 hsa-miR-6849-5p 1 1 0
chr8:37859349|37859689 hsa-miR-5591-5p 1 0 0
chr8:37859349|37859689 hsa-miR-769-3p 1 0 0
chr8:37859349|37859689 hsa-miR-6512-3p 0 1 0
chr8:37859349|37859689 hsa-miR-3121-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr8:37859349|37859689
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MQSPHQSGSTAVQYGKGQTYSFIHSAALMR
Nucleotide Sequence ATGCAGAGCCCTCACCAATCGGGGTCCACAGCTGTTCAGTATGGCAAAGGGCAGACTTACTCCTTCATCCACTCTGCTGCCTTGATGAGGTGA
CircID chr8:37859349|37859689
ORF Type ORF2
Protein Length 48
Nucleotide Length 147
Protein Sequence MPVSSSYRHVHTHLYLLHTGICRALTNRGPQLFSMAKGRLTPSSTLLP
Nucleotide Sequence ATGCCTGTGTCTTCTTCATACCGGCATGTGCACACACACCTGTATCTCCTTCATACAGGCATATGCAGAGCCCTCACCAATCGGGGTCCACAGCTGTTCAGTATGGCAAAGGGCAGACTTACTCCTTCATCCACTCTGCTGCCTTGA
CircID chr8:37859349|37859689
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MKQLGKGWTFQKADFQLQFMGIEFD
Nucleotide Sequence CTGAAACAATTGGGCAAAGGCTGGACATTTCAAAAAGCTGACTTCCAACTGCAGTTTATGGGTATAGAATTTGAT
CircID chr8:37859349|37859689
ORF Type ORF4
Protein Length 63
Nucleotide Length 192
Protein Sequence MLAKLRSTCLCLLHTGMCTHTCISFIQAYAEPSPIGVHSCSVWQRADLLLHPLCCLDEVNTLE
Nucleotide Sequence CTGTTAGCAAAACTGAGAAGCACATGCCTGTGTCTTCTTCATACCGGCATGTGCACACACACCTGTATCTCCTTCATACAGGCATATGCAGAGCCCTCACCAATCGGGGTCCACAGCTGTTCAGTATGGCAAAGGGCAGACTTACTCCTTCATCCACTCTGCTGCCTTGATGAGGTGAACACACTGGAATAA
CircID chr8:37859349|37859689
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MSSLCPIVSDHLMPQALAGILPSILFQCVHLIKAAEWMKE
Nucleotide Sequence ATGTCCAGCCTTTGCCCAATTGTTTCAGATCATCTCATGCCTCAGGCTTTGGCAGGTATCCTGCCCTCCATCTTATTCCAGTGTGTTCACCTCATCAAGGCAGCAGAGTGGATGAAGGAGTAA
CircID chr8:37859349|37859689
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MYEGDTGVCAHAGMKKTQACASQFC
Nucleotide Sequence CTGTATGAAGGAGATACAGGTGTGTGTGCACATGCCGGTATGAAGAAGACACAGGCATGTGCTTCTCAGTTTTGCTAA
CircID chr8:37859349|37859689
ORF Type ORF7
Protein Length 46
Nucleotide Length 141
Protein Sequence MQLEVSFLKCPAFAQLFQIISCLRLWQVSCPPSYSSVFTSSRQQSG
Nucleotide Sequence CTGCAGTTGGAAGTCAGCTTTTTGAAATGTCCAGCCTTTGCCCAATTGTTTCAGATCATCTCATGCCTCAGGCTTTGGCAGGTATCCTGCCCTCCATCTTATTCCAGTGTGTTCACCTCATCAAGGCAGCAGAGTGGATGA
CircID chr8:37859349|37859689
ORF Type ORF8
Protein Length 25
Nucleotide Length 78
Protein Sequence MWTPIGEGSAYACMKEIQVCVHMPV
Nucleotide Sequence CTGTGGACCCCGATTGGTGAGGGCTCTGCATATGCCTGTATGAAGGAGATACAGGTGTGTGTGCACATGCCGGTATGA
CircID chr8:37859349|37859689
ORF Type ORF9
Protein Length 59
Nucleotide Length 180
Protein Sequence MPNCFRSSHASGFGRYPALHLIPVCSPHQGSRVDEGVSLPFAILNSCGPRLVRALHMPV
Nucleotide Sequence TTGCCCAATTGTTTCAGATCATCTCATGCCTCAGGCTTTGGCAGGTATCCTGCCCTCCATCTTATTCCAGTGTGTTCACCTCATCAAGGCAGCAGAGTGGATGAAGGAGTAAGTCTGCCCTTTGCCATACTGAACAGCTGTGGACCCCGATTGGTGAGGGCTCTGCATATGCCTGTATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab