CircNet

General Information

circRNA Basic Information

CircID	chr8:38242250\|38247835
Strand	+
CircType	exon
Host Gene	ENSG00000085788.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	TTAATGATTTTCGCAGTGTTTCCTTGAACTTGCTACAGACACATTTTAAGAAAGCCCAAGAAAATCAGCAGATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTCTACTGGTGTGGATGTGTTCGCTTATATTGTTTGATATCCTAACAAATCAGAAAGATTCTTTGGGGGATATTGACAGTGAAAAGGATTCGCTAAATATTGTAATGGATCAAGGAGATACACCTACACTAGAGGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTTTGATATCTTTGAGAAGGAGAAAGTAGATAAGGAAGCTCTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:38242250\|38247835	hsa-miR-141-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:38242250\|38247835
ORF Type	ORF1
Protein Length	65
Nucleotide Length	195
Protein Sequence	MCSLILFDILTNQKDSLGDIDSEKDSLNIVMDQGDTPTLEEDLKKLQLSEFFDIFEKEKVDKEAL
Nucleotide Sequence	ATGTGTTCGCTTATATTGTTTGATATCCTAACAAATCAGAAAGATTCTTTGGGGGATATTGACAGTGAAAAGGATTCGCTAAATATTGTAATGGATCAAGGAGATACACCTACACTAGAGGAAGATTTGAAGAAACTTCAGCTCTCTGAATTCTTTGATATCTTTGAGAAGGAGAAAGTAGATAAGGAAGCTCTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:38242250\|38247835	GEMIN5	0	2	0
chr8:38242250\|38247835	U2AF2	26	1	8
chr8:38242250\|38247835	ELAVL1	6	4	0
chr8:38242250\|38247835	NCBP2	0	3	0
chr8:38242250\|38247835	NUMA1	0	0	1
chr8:38242250\|38247835	SF3B4	1	0	1
chr8:38242250\|38247835	KHDRBS1	1	0	0
chr8:38242250\|38247835	UCHL5	0	4	0
chr8:38242250\|38247835	DIS3L2	0	1	0
chr8:38242250\|38247835	RPS3	0	2	0
chr8:38242250\|38247835	TAF15	1	0	0
chr8:38242250\|38247835	FMR1	0	1	0
chr8:38242250\|38247835	CPSF6	0	0	3
chr8:38242250\|38247835	NUDT21	0	1	0
chr8:38242250\|38247835	TIA1	3	0	0
chr8:38242250\|38247835	RBM15B	0	6	0
chr8:38242250\|38247835	TROVE2	2	0	0
chr8:38242250\|38247835	FUS	0	1	0
chr8:38242250\|38247835	GPKOW	0	1	0
chr8:38242250\|38247835	SRSF1	2	0	3
chr8:38242250\|38247835	NOP58	1	0	2
chr8:38242250\|38247835	U2AF1	3	0	4
chr8:38242250\|38247835	EIF3A	0	0	1
chr8:38242250\|38247835	ADAR	0	1	0
chr8:38242250\|38247835	NOP56	1	0	1
chr8:38242250\|38247835	HNRNPU	1	0	0
chr8:38242250\|38247835	DDX54	0	0	3
chr8:38242250\|38247835	LSM11	1	0	0
chr8:38242250\|38247835	EFTUD2	0	2	0
chr8:38242250\|38247835	RBM10	1	0	0
chr8:38242250\|38247835	HNRNPA2B1	0	0	1
chr8:38242250\|38247835	RBM15	0	3	0
chr8:38242250\|38247835	SF3A3	1	0	1
chr8:38242250\|38247835	FIP1L1	2	0	0
chr8:38242250\|38247835	HNRNPC	9	4	0
chr8:38242250\|38247835	TRA2A	0	1	2
chr8:38242250\|38247835	DHX9	2	1	1
chr8:38242250\|38247835	DDX3X	0	23	0
chr8:38242250\|38247835	LARP7	0	1	0
chr8:38242250\|38247835	SMNDC1	1	0	1
chr8:38242250\|38247835	HNRNPA1	3	0	0
chr8:38242250\|38247835	LIN28B	1	2	8
chr8:38242250\|38247835	FXR1	0	1	2
chr8:38242250\|38247835	FXR2	0	1	0
chr8:38242250\|38247835	DROSHA	0	1	0
chr8:38242250\|38247835	SND1	2	0	0
chr8:38242250\|38247835	IGF2BP1	2	0	3
chr8:38242250\|38247835	GTF2F1	1	0	0
chr8:38242250\|38247835	IGF2BP2	2	1	6
chr8:38242250\|38247835	ELAVL3	2	1	0
chr8:38242250\|38247835	HNRNPUL1	1	0	1
chr8:38242250\|38247835	TARDBP	0	2	0
chr8:38242250\|38247835	BUD13	0	1	2
chr8:38242250\|38247835	KHSRP	4	0	1
chr8:38242250\|38247835	DDX24	0	2	0
chr8:38242250\|38247835	CSTF2T	1	0	1
chr8:38242250\|38247835	CSTF2	1	0	0
chr8:38242250\|38247835	NONO	1	0	1
chr8:38242250\|38247835	RBM22	0	2	0
chr8:38242250\|38247835	EIF4A3	1	4	4
chr8:38242250\|38247835	DKC1	0	1	0
chr8:38242250\|38247835	PPIG	0	1	0
chr8:38242250\|38247835	SSB	0	1	0
chr8:38242250\|38247835	ILF3	5	0	1
chr8:38242250\|38247835	FBL	1	1	2

CircRNA Information