CircRNA Information

General Information
circRNA Basic Information
CircID chr8:42180014|42180311
Strand -
CircType exon
Host Gene ENSG00000104368.16;
Algorism CIRI2;
Sequence CACGCTGCTCTCCTGGGCACAGCGGGACGAATCCGATTTCAGCTGCAGCAGCGCTGGGAGGGAGAAAGGAGGAGTGAGCTGGCGTGAGGGCCGCGTCCCCGGGAGGGGAGGAACACGCAGGAGGGGCAGGGGCTGGAGGAGGAGGCCCGTGTGTGTAAACATAGGTGAGTGCATGTGGGTGTGTTGTGTGATCTGTATGAACTGGAGCCGGGAATGACGAGCTCTTACCAATGTCATTGTCGTAAGTGTCATCATCGAATTCCTTATGGACAATGTATTTTTCGACTTCAAATTTCTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr8:42180014|42180311 hsa-miR-377-5p 0 0 1
chr8:42180014|42180311 hsa-miR-377-3p 0 0 1
chr8:42180014|42180311 hsa-miR-425-5p 0 0 1
chr8:42180014|42180311 hsa-miR-425-3p 0 0 1
chr8:42180014|42180311 hsa-miR-503-5p 0 0 1
chr8:42180014|42180311 hsa-miR-503-3p 0 0 1
chr8:42180014|42180311 hsa-miR-573 0 0 1
chr8:42180014|42180311 hsa-miR-602 1 1 1
chr8:42180014|42180311 hsa-miR-603 0 0 1
chr8:42180014|42180311 hsa-miR-1301-5p 0 0 1
chr8:42180014|42180311 hsa-miR-1301-3p 0 0 1
chr8:42180014|42180311 hsa-miR-766-5p 0 0 1
chr8:42180014|42180311 hsa-miR-766-3p 0 0 1
chr8:42180014|42180311 hsa-miR-665 0 0 1
chr8:42180014|42180311 hsa-miR-1272 0 0 1
chr8:42180014|42180311 hsa-miR-145-5p 0 0 1
chr8:42180014|42180311 hsa-miR-1184 0 0 1
chr8:42180014|42180311 hsa-miR-324-3p 0 0 1
chr8:42180014|42180311 hsa-miR-483-3p 1 1 1
chr8:42180014|42180311 hsa-miR-485-3p 0 0 1
chr8:42180014|42180311 hsa-miR-362-3p 0 1 1
chr8:42180014|42180311 hsa-miR-329 0 0 1
chr8:42180014|42180311 hsa-miR-484 1 0 0
chr8:42180014|42180311 hsa-miR-557 1 1 0
chr8:42180014|42180311 hsa-miR-623 1 0 0
chr8:42180014|42180311 hsa-miR-1281 1 0 0
chr8:42180014|42180311 hsa-miR-1825 1 0 0
chr8:42180014|42180311 hsa-miR-1913 1 1 0
chr8:42180014|42180311 hsa-miR-1976 1 1 0
chr8:42180014|42180311 hsa-miR-2278 0 1 0
chr8:42180014|42180311 hsa-miR-466 0 1 0
chr8:42180014|42180311 hsa-miR-4326 0 1 0
chr8:42180014|42180311 hsa-miR-4268 1 1 0
chr8:42180014|42180311 hsa-miR-4290 1 0 0
chr8:42180014|42180311 hsa-miR-3615 1 0 0
chr8:42180014|42180311 hsa-miR-3909 1 0 0
chr8:42180014|42180311 hsa-miR-4469 0 1 0
chr8:42180014|42180311 hsa-miR-548al 0 1 0
chr8:42180014|42180311 hsa-miR-3972 1 0 0
chr8:42180014|42180311 hsa-miR-4641 1 0 0
chr8:42180014|42180311 hsa-miR-5047 0 1 0
chr8:42180014|42180311 hsa-miR-5193 1 1 0
chr8:42180014|42180311 hsa-miR-7703 1 0 0
chr8:42180014|42180311 hsa-miR-8485 0 1 0
chr8:42180014|42180311 hsa-miR-12120 1 0 0
chr8:42180014|42180311 hsa-miR-6749-3p 1 1 0
chr8:42180014|42180311 hsa-miR-18a-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6836-3p 1 0 0
chr8:42180014|42180311 hsa-miR-149-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6720-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6892-3p 1 0 0
chr8:42180014|42180311 hsa-miR-210-5p 1 1 0
chr8:42180014|42180311 hsa-miR-6881-3p 1 1 0
chr8:42180014|42180311 hsa-miR-1225-3p 1 0 0
chr8:42180014|42180311 hsa-miR-296-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6875-3p 0 1 0
chr8:42180014|42180311 hsa-miR-512-3p 0 1 0
chr8:42180014|42180311 hsa-miR-3189-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6849-3p 1 0 0
chr8:42180014|42180311 hsa-miR-7110-3p 1 0 0
chr8:42180014|42180311 hsa-miR-1915-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6845-3p 1 1 0
chr8:42180014|42180311 hsa-miR-423-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4725-5p 1 0 0
chr8:42180014|42180311 hsa-miR-877-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6882-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4436b-5p 1 0 0
chr8:42180014|42180311 hsa-miR-7109-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4763-5p 1 0 0
chr8:42180014|42180311 hsa-miR-1247-5p 1 0 0
chr8:42180014|42180311 hsa-miR-6894-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6803-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6514-3p 0 1 0
chr8:42180014|42180311 hsa-miR-5001-3p 1 0 0
chr8:42180014|42180311 hsa-miR-7113-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6809-3p 0 1 0
chr8:42180014|42180311 hsa-miR-7111-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6780a-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4667-3p 0 1 0
chr8:42180014|42180311 hsa-miR-6736-3p 1 0 0
chr8:42180014|42180311 hsa-miR-941 1 0 0
chr8:42180014|42180311 hsa-miR-4640-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6769a-3p 1 1 0
chr8:42180014|42180311 hsa-miR-339-5p 1 0 0
chr8:42180014|42180311 hsa-miR-3191-3p 0 1 0
chr8:42180014|42180311 hsa-miR-4707-5p 1 0 0
chr8:42180014|42180311 hsa-miR-1237-3p 1 0 0
chr8:42180014|42180311 hsa-miR-1236-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6811-3p 1 0 0
chr8:42180014|42180311 hsa-miR-1226-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6889-3p 1 0 0
chr8:42180014|42180311 hsa-miR-660-3p 0 1 0
chr8:42180014|42180311 hsa-miR-3158-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6804-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4758-3p 1 0 0
chr8:42180014|42180311 hsa-miR-1238-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6887-3p 1 1 0
chr8:42180014|42180311 hsa-miR-1288-5p 0 1 0
chr8:42180014|42180311 hsa-miR-6741-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6752-3p 1 1 0
chr8:42180014|42180311 hsa-miR-4632-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6886-3p 1 0 0
chr8:42180014|42180311 hsa-miR-5088-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4749-3p 1 1 0
chr8:42180014|42180311 hsa-miR-328-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6795-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6794-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6760-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6880-3p 1 0 0
chr8:42180014|42180311 hsa-miR-1178-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6748-3p 1 0 0
chr8:42180014|42180311 hsa-miR-3670 1 0 0
chr8:42180014|42180311 hsa-miR-188-3p 1 0 0
chr8:42180014|42180311 hsa-miR-3173-5p 1 0 0
chr8:42180014|42180311 hsa-miR-1249-3p 1 0 0
chr8:42180014|42180311 hsa-miR-3162-3p 1 0 0
chr8:42180014|42180311 hsa-miR-5003-5p 0 1 0
chr8:42180014|42180311 hsa-miR-4520-5p 0 1 0
chr8:42180014|42180311 hsa-miR-4738-5p 0 1 0
chr8:42180014|42180311 hsa-miR-3127-3p 1 0 0
chr8:42180014|42180311 hsa-miR-320a-5p 1 1 0
chr8:42180014|42180311 hsa-miR-4685-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6754-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4697-5p 0 1 0
chr8:42180014|42180311 hsa-miR-6791-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6877-3p 1 1 0
chr8:42180014|42180311 hsa-miR-10398-5p 1 0 0
chr8:42180014|42180311 hsa-miR-2682-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4722-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6756-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6784-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6792-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6801-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6810-3p 1 1 0
chr8:42180014|42180311 hsa-miR-6829-3p 1 1 0
chr8:42180014|42180311 hsa-miR-10392-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6512-3p 0 1 0
chr8:42180014|42180311 hsa-miR-6819-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6823-3p 1 0 0
chr8:42180014|42180311 hsa-miR-6744-3p 1 0 0
chr8:42180014|42180311 hsa-miR-4691-5p 1 1 0
chr8:42180014|42180311 hsa-miR-6781-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr8:42180014|42180311
ORF Type ORF1
Protein Length 38
Nucleotide Length 114
Protein Sequence MCDLYELEPGMTSSYQCHCRKCHHRIPYGQCIFRLQIS
Nucleotide Sequence TTGTGTGATCTGTATGAACTGGAGCCGGGAATGACGAGCTCTTACCAATGTCATTGTCGTAAGTGTCATCATCGAATTCCTTATGGACAATGTATTTTTCGACTTCAAATTTCT

CircID chr8:42180014|42180311
ORF Type ORF2
Protein Length 70
Nucleotide Length 213
Protein Sequence MLSWAQRDESDFSCSSAGREKGGVSWREGRVPGRGGTRRRGRGWRRRPVCVNIGECMWVCCVICMNWSRE
Nucleotide Sequence CTGCTCTCCTGGGCACAGCGGGACGAATCCGATTTCAGCTGCAGCAGCGCTGGGAGGGAGAAAGGAGGAGTGAGCTGGCGTGAGGGCCGCGTCCCCGGGAGGGGAGGAACACGCAGGAGGGGCAGGGGCTGGAGGAGGAGGCCCGTGTGTGTAAACATAGGTGAGTGCATGTGGGTGTGTTGTGTGATCTGTATGAACTGGAGCCGGGAATGA

CircID chr8:42180014|42180311
ORF Type ORF3
Protein Length 97
Nucleotide Length 291
Protein Sequence MKSKNTLSIRNSMMTLTTMTLVRARHSRLQFIQITQHTHMHSPMFTHTGLLLQPLPLLRVPPLPGTRPSRQLTPPFSLPALLQLKSDSSRCAQESSV
Nucleotide Sequence TTGAAGTCGAAAAATACATTGTCCATAAGGAATTCGATGATGACACTTACGACAATGACATTGGTAAGAGCTCGTCATTCCCGGCTCCAGTTCATACAGATCACACAACACACCCACATGCACTCACCTATGTTTACACACACGGGCCTCCTCCTCCAGCCCCTGCCCCTCCTGCGTGTTCCTCCCCTCCCGGGGACGCGGCCCTCACGCCAGCTCACTCCTCCTTTCTCCCTCCCAGCGCTGCTGCAGCTGAAATCGGATTCGTCCCGCTGTGCCCAGGAGAGCAGCGTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites