CircNet

General Information

circRNA Basic Information

CircID	chr8:42308901\|42314429
Strand	+
CircType	exon
Host Gene	ENSG00000104365.13;
Algorism	CIRI2;find_circ;CIRC
Sequence	GCCCCAGAGCTACTGGAGCAGCAGAAGTACACAGTGACCGTCGACTACTGGAGCTTCGGCACCCTGGCCTTTGAGTGCATCACGGGCTTCCGGCCCTTCCTCCCCAACTGGCAGCCCGTGCAGTGCGTAAGAATGTGGCCGGGTACAGTGGCTCACTCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGTGGATCAGTTGAGGCCAGCAGTTCCAGACCAGCCTGGCCAACATGGCAAAACCCTGTCTCTACTAAAAACCCTAGCCAGGTGTGGTGGCGGGCGCCTGTAATCCCAGCTACTCGGAAGGCTGAGGTGGGAGAATTGCTTAAACCCAGGAGGCAGAGGTCGCATCACTGCAATCCAGCCTGGGCGACAGAGTGAGACTCTGTCTCAAAACAAAAAAAGTTTAAAAAAAAAAAAAACAAATGAGATTATAATACTGTATTTTTACTGTACCTTTTCTGGGTTTAGATATGTTTAGATACACCAATACTTACCATTGTGTTACCCTGGCCTACAGTATTCAGTACCGGAGCATGCTGTACAGGTTTGTAGCCTAGGAGCAATAGGGTGTACGATACAGCCTAGGTCTGTAGTAGGCTAAACCATCTAGGTTTGTGTTATGTTCACACAAGGACTAAAATCACCTAATGACGAATTTCTTAGAATGTGTCCCCGTCATAGCAACGTGTGACTGCACCTAACAAGATTCATATTTGCAGGCATTCAAAAGTGCGGCAGAAGAGTGAGGTGGACATTGTTGTTAGCGAAGACTTGAATGGAACGGTGAAGTTTTCAAGCTCTTTACCCTACCCCAATAATCTTAACAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:42308901\|42314429	hsa-miR-143-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:42308901\|42314429
ORF Type	ORF1
Protein Length	53
Nucleotide Length	159
Protein Sequence	MRPLPPGFKQFSHLSLPSSWDYRRPPPHLARVFSRDRVLPCWPGWSGTAGLN*
Nucleotide Sequence	ATGCGACCTCTGCCTCCTGGGTTTAAGCAATTCTCCCACCTCAGCCTTCCGAGTAGCTGGGATTACAGGCGCCCGCCACCACACCTGGCTAGGGTTTTTAGTAGAGACAGGGTTTTGCCATGTTGGCCAGGCTGGTCTGGAACTGCTGGCCTCAACTGA

CircID	chr8:42308901\|42314429
ORF Type	ORF2
Protein Length	64
Nucleotide Length	192
Protein Sequence	SQLLGRLRWENCLNPGGRGRITAIQPGRQSETLSQNKKSLKKKKTNEIIILYFYCTFSGFRYV*
Nucleotide Sequence	TCCCAGCTACTCGGAAGGCTGAGGTGGGAGAATTGCTTAAACCCAGGAGGCAGAGGTCGCATCACTGCAATCCAGCCTGGGCGACAGAGTGAGACTCTGTCTCAAAACAAAAAAAGTTTAAAAAAAAAAAAAACAAATGAGATTATAATACTGTATTTTTACTGTACCTTTTCTGGGTTTAGATATGTTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr8:42308901\|42314429	AGGF1	0	0	1
chr8:42308901\|42314429	KHSRP	1	0	0
chr8:42308901\|42314429	ELAVL1	2	3	8
chr8:42308901\|42314429	SF3B4	2	0	3
chr8:42308901\|42314429	METAP2	0	0	2
chr8:42308901\|42314429	CELF2	0	0	4
chr8:42308901\|42314429	PUM2	0	0	1
chr8:42308901\|42314429	PRPF8	0	0	4
chr8:42308901\|42314429	YTHDF1	1	0	0
chr8:42308901\|42314429	RPS3	0	0	1
chr8:42308901\|42314429	ZNF622	0	0	5
chr8:42308901\|42314429	TNRC6A	0	0	2
chr8:42308901\|42314429	CAPRIN1	1	0	0
chr8:42308901\|42314429	FMR1	1	3	3
chr8:42308901\|42314429	CPSF6	1	0	1
chr8:42308901\|42314429	NUDT21	2	0	1
chr8:42308901\|42314429	CPSF4	0	0	1
chr8:42308901\|42314429	FUS	1	0	1
chr8:42308901\|42314429	EIF3H	0	0	1
chr8:42308901\|42314429	DGCR8	2	0	0
chr8:42308901\|42314429	QKI	0	0	2
chr8:42308901\|42314429	SRSF1	2	0	8
chr8:42308901\|42314429	NOP58	0	0	2
chr8:42308901\|42314429	ADAR	0	0	9
chr8:42308901\|42314429	U2AF2	17	13	31
chr8:42308901\|42314429	EIF3D	0	0	1
chr8:42308901\|42314429	NOP56	1	1	0
chr8:42308901\|42314429	DDX54	0	0	4
chr8:42308901\|42314429	EIF3G	1	0	0
chr8:42308901\|42314429	EFTUD2	0	0	1
chr8:42308901\|42314429	GRWD1	0	0	4
chr8:42308901\|42314429	RBM10	1	0	0
chr8:42308901\|42314429	PCBP2	0	0	2
chr8:42308901\|42314429	HNRNPUL1	0	1	0
chr8:42308901\|42314429	SF3A3	1	0	0
chr8:42308901\|42314429	HNRNPL	1	0	2
chr8:42308901\|42314429	PTBP1	2	0	0
chr8:42308901\|42314429	HNRNPC	24	14	35
chr8:42308901\|42314429	SUGP2	0	0	2
chr8:42308901\|42314429	TRA2A	0	0	1
chr8:42308901\|42314429	DHX9	0	1	5
chr8:42308901\|42314429	DDX3X	8	0	0
chr8:42308901\|42314429	AGO1	0	0	1
chr8:42308901\|42314429	ALKBH5	1	0	0
chr8:42308901\|42314429	HNRNPA1	6	1	7
chr8:42308901\|42314429	SRSF7	0	0	1
chr8:42308901\|42314429	LIN28B	2	0	0
chr8:42308901\|42314429	NKRF	0	0	1
chr8:42308901\|42314429	BCCIP	0	0	1
chr8:42308901\|42314429	BUD13	0	0	1
chr8:42308901\|42314429	FIP1L1	3	0	1
chr8:42308901\|42314429	FASTKD2	0	0	1
chr8:42308901\|42314429	IGF2BP3	0	0	4
chr8:42308901\|42314429	IGF2BP2	0	2	27
chr8:42308901\|42314429	PAPD5	0	0	1
chr8:42308901\|42314429	TARDBP	11	2	9
chr8:42308901\|42314429	YTHDC1	2	0	0
chr8:42308901\|42314429	AIFM1	1	0	0
chr8:42308901\|42314429	GTF2F1	0	0	1
chr8:42308901\|42314429	RBFOX2	10	0	1
chr8:42308901\|42314429	FXR1	0	0	1
chr8:42308901\|42314429	EIF4G2	0	0	1
chr8:42308901\|42314429	RBM47	0	0	3
chr8:42308901\|42314429	CSTF2T	3	1	4
chr8:42308901\|42314429	CSTF2	6	0	2
chr8:42308901\|42314429	TARBP2	0	0	19
chr8:42308901\|42314429	CPSF7	3	0	4
chr8:42308901\|42314429	ILF3	0	0	1
chr8:42308901\|42314429	WDR33	2	0	0
chr8:42308901\|42314429	PPIG	0	0	2
chr8:42308901\|42314429	HNRNPK	1	0	0
chr8:42308901\|42314429	AGO2	0	0	3
chr8:42308901\|42314429	ATXN2	6	0	3
chr8:42308901\|42314429	EIF4A3	3	1	4
chr8:42308901\|42314429	FBL	0	0	3

CircRNA Information