CircNet

General Information

circRNA Basic Information

CircID	chr8:43028777\|43028912
Strand	+
CircType	exon
Host Gene	ENSG00000168172.7;
Algorism	CIRI2;
Sequence	TTGCTTGGAATTCGACACTGCTGGATCAAGTCTGTTGCTTGATTACAAAAATTTAAAGAGAAAGAAGAAAGCATCAAGATTTCCTAACAAAATAATTGTAAGCACCAAGCTGACTCAAAAGGATTATGGTTAGTCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr8:43028777\|43028912	hsa-miR-627-5p	0	0	1
chr8:43028777\|43028912	hsa-miR-627-3p	0	0	1
chr8:43028777\|43028912	hsa-miR-640	0	0	1
chr8:43028777\|43028912	hsa-miR-944	0	0	1
chr8:43028777\|43028912	hsa-miR-1258	0	0	1
chr8:43028777\|43028912	hsa-miR-501-5p	0	1	1
chr8:43028777\|43028912	hsa-miR-338-3p	0	0	1
chr8:43028777\|43028912	hsa-miR-513a-3p	0	0	1
chr8:43028777\|43028912	hsa-miR-500	0	0	1
chr8:43028777\|43028912	hsa-miR-937-5p	1	1	0
chr8:43028777\|43028912	hsa-miR-500a-5p	0	1	0
chr8:43028777\|43028912	hsa-miR-6733-3p	0	1	0
chr8:43028777\|43028912	hsa-miR-499b-5p	0	1	0
chr8:43028777\|43028912	hsa-miR-4771	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr8:43028777\|43028912
ORF Type	ORF1
Protein Length	42
Nucleotide Length	129
Protein Sequence	MEFDTAGSSLLLDYKNLKRKKKASRFPNKIIVSTKLTQKDYG
Nucleotide Sequence	TTGGAATTCGACACTGCTGGATCAAGTCTGTTGCTTGATTACAAAAATTTAAAGAGAAAGAAGAAAGCATCAAGATTTCCTAACAAAATAATTGTAAGCACCAAGCTGACTCAAAAGGATTATGGTTAG

CircID	chr8:43028777\|43028912
ORF Type	ORF2
Protein Length	25
Nucleotide Length	75
Protein Sequence	MMLSSFSLNFCNQATDLIQQCRIPS
Nucleotide Sequence	TTGATGCTTTCTTCTTTCTCTTTAAATTTTTGTAATCAAGCAACAGACTTGATCCAGCAGTGTCGAATTCCAAGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information